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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • nucleus 1
  • mitochondrion 4
  • plastid 1
  • endoplasmic reticulum 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Os06t0638900-01 Rice cytosol, plasma membrane 24.19 64.42
PGSC0003DMT400066559 Potato cytosol 48.74 57.45
Solyc01g107740.2.1 Tomato cytosol 48.01 55.88
VIT_03s0180g00030.t01 Wine grape cytosol 49.1 55.06
PGSC0003DMT400015906 Potato cytosol 47.65 52.8
Solyc10g050060.1.1 Tomato cytosol 47.65 52.8
GSMUA_Achr4P09410_001 Banana cytosol 45.49 51.64
Bra034611.1-P Field mustard cytosol 42.24 48.55
CDX76264 Canola cytosol 41.88 48.13
Bra017628.1-P Field mustard cytosol 44.77 47.33
CDY57743 Canola cytosol 40.79 47.28
AT4G34150.1 Thale cress cytosol 41.52 46.56
CDX72452 Canola cytosol 42.24 46.43
KRH27566 Soybean cytosol 42.96 46.12
KRH77964 Soybean cytosol 42.96 45.77
CDY49277 Canola cytosol 43.32 45.63
Bra011500.1-P Field mustard cytosol 41.88 44.96
CDX75404 Canola cytosol, extracellular, nucleus 41.52 44.57
OQU76760 Sorghum cytosol 44.4 44.24
PGSC0003DMT400077661 Potato cytosol 32.49 44.12
TraesCS7B01G441800.1 Wheat cytosol 43.32 44.12
TraesCS7B01G441900.1 Wheat cytosol 43.32 44.12
TraesCSU01G173200.1 Wheat cytosol 41.16 43.85
TraesCS7A01G524400.1 Wheat cytosol 42.96 43.75
CDY31792 Canola cytosol 10.11 43.08
TraesCS7D01G513300.1 Wheat cytosol 41.88 42.65
VIT_18s0001g09970.t01 Wine grape cytosol 45.49 42.28
Zm00001d046625_P001 Maize cytosol 45.13 42.23
TraesCSU01G173100.1 Wheat cytosol 42.6 41.84
HORVU7Hr1G116460.1 Barley cytosol 39.35 39.07
HORVU7Hr1G116400.2 Barley cytosol 39.35 39.07
CDY31791 Canola extracellular, plasma membrane 7.58 25.93
Protein Annotations
Gene3D:2.60.40.150MapMan:35.2InterPro:C2_domInterPro:C2_domain_sfGO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016301GO:GO:0016310GO:GO:0016740
EnsemblPlantsGene:GSMUA_Achr3G19730_001EnsemblPlants:GSMUA_Achr3P19730_001EnsemblPlants:GSMUA_Achr3T19730_001InterPro:IPR000008InterPro:IPR035892UniProt:M0SG39
PFAM:PF00168PFscan:PS50004PANTHER:PTHR10024PANTHER:PTHR10024:SF345SMART:SM00239SUPFAM:SSF49562
UniParc:UPI000295BD5CSEG:seg::::
Description
retrotransposon protein, putative, unclassified, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G19730_001]
Coordinates
chr3:+:21053151..21055536
Molecular Weight (calculated)
30672.4 Da
IEP (calculated)
9.099
GRAVY (calculated)
-0.491
Length
277 amino acids
Sequence
(BLAST)
001: MKTTRFVTWR SPLTLFLDSC RKLRTNSPSS LSLSLVMSIQ GQLLEVTVVG CNKLKDTEWI SRQDPYVILE YATTKFRTRT CTDGGRNPSF QEKTALSLIE
101: GLREISVSVW NKNTVSHDDF IGSGRVQLSK VLAQGYDDSC WSIQSRSGRY SGEVKLIMHY ANAGKAEKPA KSATPSSYAP SAPPYNPAPQ YASPYMPPKA
201: VDSFSYPPAA YPPAGYPQVP DPALYQPAIY PPPLLQQQYP PTYPPTQTYL PLPPYPPPPG QPCYPPAYPG VYPPPPY
Best Arabidopsis Sequence Match ( AT4G34150.1 )
(BLAST)
001: MSMMAGIQGQ ILEVTVVGCQ KLKDTEWFSR QDPYVVLEYG GRSHRTRTCT DGGKNAVFQE KFIFTLIEGL RDLKVAVWNS NTLSTDDFIG NATIQLQKVL
101: SQEYDDCTWT LQSKTGRFAG EVQLLLHYAG AKKHNYGSAP SAPYAPHVPQ YSAPPSASPY STAPPYSGPS LYPQVQQYPQ PSGYPPASGY PPQPSAYPPP
201: STSGYPPIPS AYPPPPPSSA YPPQPYPPQP SYYPQGPYPG QYPPPPY
Arabidopsis Description
AT4g34150/F28A23_90 [Source:UniProtKB/TrEMBL;Acc:Q945K9]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.