Factsheet for TraesCS7A01G524400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G441900.1	Wheat	cytosol	97.79	97.79
TraesCS7B01G441800.1	Wheat	cytosol	97.79	97.79
TraesCSU01G173200.1	Wheat	cytosol	90.81	95.0
TraesCS7D01G513300.1	Wheat	cytosol	88.97	88.97
TraesCSU01G173100.1	Wheat	cytosol	89.34	86.17
HORVU7Hr1G116460.1	Barley	cytosol	79.04	77.06
HORVU7Hr1G116400.2	Barley	cytosol	79.04	77.06
Os06t0638900-01	Rice	cytosol, plasma membrane	27.21	71.15
Zm00001d046625_P001	Maize	cytosol	65.44	60.14
OQU76760	Sorghum	cytosol	59.93	58.63
KRH77964	Soybean	cytosol	47.06	49.23
CDX72452	Canola	cytosol	45.59	49.21
KRH27566	Soybean	cytosol	45.96	48.45
VIT_03s0180g00030.t01	Wine grape	cytosol	43.75	48.18
CDY49277	Canola	cytosol	46.32	47.91
AT4G34150.1	Thale cress	cytosol	43.38	47.77
PGSC0003DMT400066559	Potato	cytosol	41.18	47.66
Bra017628.1-P	Field mustard	cytosol	45.59	47.33
Bra011500.1-P	Field mustard	cytosol	44.49	46.9
CDX75404	Canola	cytosol, extracellular, nucleus	43.75	46.12
Bra034611.1-P	Field mustard	cytosol	40.81	46.06
Solyc01g107740.2.1	Tomato	cytosol	40.07	45.8
CDX76264	Canola	cytosol	40.44	45.64
Solyc10g050060.1.1	Tomato	cytosol	41.54	45.2
PGSC0003DMT400015906	Potato	cytosol	41.54	45.2
CDY57743	Canola	cytosol	39.34	44.77
GSMUA_Achr3P19730_001	Banana	mitochondrion	43.75	42.96
VIT_18s0001g09970.t01	Wine grape	cytosol	44.49	40.6
PGSC0003DMT400077661	Potato	cytosol	29.78	39.71
CDY31792	Canola	cytosol	8.09	33.85
CDY31791	Canola	extracellular, plasma membrane	6.25	20.99

Protein Annotations

Gene3D:2.60.40.150	MapMan:35.2	InterPro:C2_dom	InterPro:C2_domain_sf	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006950	GO:GO:0008150	GO:GO:0009409
GO:GO:0009506	GO:GO:0009628	InterPro:IPR000008	InterPro:IPR035892	PFAM:PF00168	PRINTS:PR01217
PFscan:PS50004	PANTHER:PTHR10024	PANTHER:PTHR10024:SF345	SMART:SM00239	SUPFAM:SSF49562	EnsemblPlantsGene:TraesCS7A01G524400
EnsemblPlants:TraesCS7A01G524400.1	TIGR:cd00030	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7A:-:706841202..706845052

Molecular Weight (calculated)

29946.1 Da

IEP (calculated)

8.707

GRAVY (calculated)

-0.816

Length

272 amino acids

Sequence
(BLAST)

001: MSIQGLLLEV RVTGCRKLRD TEFFSRQDPY VIVDYATTKL RTRTCTDGGR NPSFDEKFHI PLIEGLRELS INVWNSNTIN TDDFIGSCRV PLNKVLTSGY
101: DDSSWPLQTR HMKSAGEVKL IMHFDVSAMK NKMAGKTSGQ YAPSPYGASS ASYPAPSAYA AAPPPHQAYP APSHAPYPAP SAYSTPPPQQ PYPTPPPQQP
201: YPQQGCPPAS HPPQPYGQPY PPQPYGQPYQ PQPYGQQPYP PQPYGQPYPP PSAAQSPYPP APYPGAYPPR PY

Best Arabidopsis Sequence Match ( AT4G34150.1 )
(BLAST)

001: MSMMAGIQGQ ILEVTVVGCQ KLKDTEWFSR QDPYVVLEYG GRSHRTRTCT DGGKNAVFQE KFIFTLIEGL RDLKVAVWNS NTLSTDDFIG NATIQLQKVL
101: SQEYDDCTWT LQSKTGRFAG EVQLLLHYAG AKKHNYGSAP SAPYAPHVPQ YSAPPSASPY STAPPYSGPS LYPQVQQYPQ PSGYPPASGY PPQPSAYPPP
201: STSGYPPIPS AYPPPPPSSA YPPQPYPPQP SYYPQGPYPG QYPPPPY

Arabidopsis Description

AT4g34150/F28A23_90 [Source:UniProtKB/TrEMBL;Acc:Q945K9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.