Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G116460.1 | Barley | cytosol | 100.0 | 100.0 |
| TraesCS7D01G513300.1 | Wheat | cytosol | 82.44 | 84.56 |
| TraesCSU01G173100.1 | Wheat | cytosol | 82.44 | 81.56 |
| TraesCS7B01G441900.1 | Wheat | cytosol | 77.42 | 79.41 |
| TraesCS7B01G441800.1 | Wheat | cytosol | 77.42 | 79.41 |
| TraesCS7A01G524400.1 | Wheat | cytosol | 77.06 | 79.04 |
| TraesCSU01G173200.1 | Wheat | cytosol | 70.61 | 75.77 |
| Os06t0638900-01 | Rice | cytosol, plasma membrane | 26.88 | 72.12 |
| OQU76760 | Sorghum | cytosol | 54.48 | 54.68 |
| Zm00001d046625_P001 | Maize | cytosol | 55.91 | 52.7 |
| CDX72452 | Canola | cytosol | 42.29 | 46.83 |
| KRH27566 | Soybean | cytosol | 43.01 | 46.51 |
| CDY49277 | Canola | cytosol | 43.37 | 46.01 |
| KRH77964 | Soybean | cytosol | 42.65 | 45.77 |
| AT4G34150.1 | Thale cress | cytosol | 40.5 | 45.75 |
| Bra011500.1-P | Field mustard | cytosol | 42.29 | 45.74 |
| PGSC0003DMT400066559 | Potato | cytosol | 38.35 | 45.53 |
| CDX75404 | Canola | cytosol, extracellular, nucleus | 41.94 | 45.35 |
| VIT_03s0180g00030.t01 | Wine grape | cytosol | 40.14 | 45.34 |
| Bra017628.1-P | Field mustard | cytosol | 42.29 | 45.04 |
| PGSC0003DMT400015906 | Potato | cytosol | 39.78 | 44.4 |
| Bra034611.1-P | Field mustard | cytosol | 38.35 | 44.4 |
| CDX76264 | Canola | cytosol | 37.99 | 43.98 |
| Solyc01g107740.2.1 | Tomato | cytosol | 37.28 | 43.7 |
| Solyc10g050060.1.1 | Tomato | cytosol | 39.07 | 43.6 |
| CDY57743 | Canola | cytosol | 35.84 | 41.84 |
| GSMUA_Achr3P19730_001 | Banana | mitochondrion | 39.07 | 39.35 |
| PGSC0003DMT400077661 | Potato | cytosol | 27.24 | 37.25 |
| VIT_18s0001g09970.t01 | Wine grape | cytosol | 39.78 | 37.25 |
| CDY31792 | Canola | cytosol | 8.6 | 36.92 |
| CDY31791 | Canola | extracellular, plasma membrane | 5.73 | 19.75 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G116400.2 | EnsemblPlantsGene:HORVU7Hr1G116400 | Gene3D:2.60.40.150 | InterPro:C2_dom | InterPro:C2_domain_sf | InterPro:IPR000008 |
| InterPro:IPR035892 | PANTHER:PTHR10024 | PANTHER:PTHR10024:SF345 | PFAM:PF00168 | PFscan:PS50004 | PRINTS:PR01217 |
| SEG:seg | SMART:SM00239 | SUPFAM:SSF49562 | UniParc:UPI000B46EAB1 | UniProt:A0A287XXI6 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr7H:-:643317708..643321343
Molecular Weight (calculated)
30746.2 Da
IEP (calculated)
8.403
GRAVY (calculated)
-0.670
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: PPMSIQGQLL EVRVTGCRKL RDTEFFSRQD PYVIIDYANN KLRTRTCTDG GRNPSFDEKF HIPLIEGLRE LSINVWNSNT INTDDFIGSC RVPLNKVLTS
101: GFDDASWPLQ TRHMKSAGEV MLIMHFDVSA MVSERLITGL CFIKNKMAGK PTGQYAPSPY GASSASYPAP SAYAAAPPPH QAYAAPAHAP YPAPSAYSTP
201: PPQQPYPHQA CPPTSQPPQP YGQPYPPQQL YGQPYPPQQP YGQQPYPPQP YGQPYPPPSA AQSPYPPAPY PGAYPPRPY
101: GFDDASWPLQ TRHMKSAGEV MLIMHFDVSA MVSERLITGL CFIKNKMAGK PTGQYAPSPY GASSASYPAP SAYAAAPPPH QAYAAPAHAP YPAPSAYSTP
201: PPQQPYPHQA CPPTSQPPQP YGQPYPPQQL YGQPYPPQQP YGQQPYPPQP YGQPYPPPSA AQSPYPPAPY PGAYPPRPY
001: MSMMAGIQGQ ILEVTVVGCQ KLKDTEWFSR QDPYVVLEYG GRSHRTRTCT DGGKNAVFQE KFIFTLIEGL RDLKVAVWNS NTLSTDDFIG NATIQLQKVL
101: SQEYDDCTWT LQSKTGRFAG EVQLLLHYAG AKKHNYGSAP SAPYAPHVPQ YSAPPSASPY STAPPYSGPS LYPQVQQYPQ PSGYPPASGY PPQPSAYPPP
201: STSGYPPIPS AYPPPPPSSA YPPQPYPPQP SYYPQGPYPG QYPPPPY
101: SQEYDDCTWT LQSKTGRFAG EVQLLLHYAG AKKHNYGSAP SAPYAPHVPQ YSAPPSASPY STAPPYSGPS LYPQVQQYPQ PSGYPPASGY PPQPSAYPPP
201: STSGYPPIPS AYPPPPPSSA YPPQPYPPQP SYYPQGPYPG QYPPPPY
Arabidopsis Description
AT4g34150/F28A23_90 [Source:UniProtKB/TrEMBL;Acc:Q945K9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.