Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- nucleus 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_13s0019g01840.t01 | Wine grape | plastid | 78.41 | 75.58 |
| Os01t0972900-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 76.43 | 72.59 |
| TraesCS3D01G533000.1 | Wheat | plastid | 76.43 | 71.84 |
| TraesCS3B01G595600.1 | Wheat | plastid | 76.65 | 71.75 |
| AT5G13840.1 | Thale cress | plastid | 75.99 | 71.73 |
| EES02145 | Sorghum | plastid | 75.77 | 71.37 |
| CDX70523 | Canola | plastid | 73.57 | 71.37 |
| CDX78541 | Canola | plastid | 73.35 | 71.15 |
| KRG97899 | Soybean | plastid | 76.43 | 70.96 |
| PGSC0003DMT400076326 | Potato | nucleus, plastid | 78.41 | 70.92 |
| TraesCS3A01G527600.1 | Wheat | plastid | 75.99 | 70.84 |
| Solyc06g043150.2.1 | Tomato | nucleus, plastid | 77.75 | 70.74 |
| Zm00001d041957_P004 | Maize | plastid | 75.33 | 70.52 |
| KRH30985 | Soybean | plastid | 77.31 | 70.2 |
| Bra006219.1-P | Field mustard | plastid | 75.11 | 70.16 |
| HORVU3Hr1G115170.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 76.21 | 58.94 |
| GSMUA_Achr11P... | Banana | plastid | 58.81 | 54.94 |
| GSMUA_Achr11P... | Banana | plastid | 56.61 | 52.34 |
| CDY04804 | Canola | mitochondrion, plastid | 15.42 | 43.75 |
| GSMUA_Achr1P27660_001 | Banana | mitochondrion | 15.2 | 42.86 |
| GSMUA_AchrUn_... | Banana | cytosol | 8.15 | 42.53 |
| GSMUA_Achr2P19120_001 | Banana | cytosol | 24.89 | 42.32 |
| GSMUA_Achr1P27670_001 | Banana | cytosol | 5.73 | 41.27 |
| GSMUA_AchrUn_... | Banana | cytosol | 21.37 | 40.59 |
| GSMUA_Achr11P... | Banana | plastid | 41.41 | 39.66 |
| GSMUA_Achr5P18020_001 | Banana | nucleus, plastid | 40.75 | 39.11 |
| GSMUA_Achr8P14580_001 | Banana | nucleus, plastid | 40.75 | 38.46 |
| GSMUA_Achr10P... | Banana | nucleus | 33.7 | 37.59 |
| GSMUA_Achr1P25940_001 | Banana | cytosol | 24.01 | 36.7 |
| GSMUA_AchrUn_... | Banana | cytosol | 28.63 | 35.71 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.16 | 35.52 |
| GSMUA_Achr11P... | Banana | mitochondrion | 32.38 | 34.83 |
| GSMUA_Achr1P28050_001 | Banana | cytosol | 30.84 | 34.4 |
| GSMUA_Achr3P21370_001 | Banana | cytosol | 29.07 | 33.25 |
| GSMUA_AchrUn_... | Banana | cytosol | 22.25 | 33.11 |
| GSMUA_AchrUn_... | Banana | cytosol | 17.18 | 27.27 |
| Os01t0973000-01 | Rice | cytosol | 0.88 | 1.42 |
Protein Annotations
| MapMan:13.3.4.1.3 | Gene3D:2.130.10.10 | InterPro:Cdc20/Fizzy | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010997 | GO:GO:0019538 |
| GO:GO:0030234 | GO:GO:0097027 | GO:GO:1904668 | EnsemblPlantsGene:GSMUA_Achr5G07090_001 | EnsemblPlants:GSMUA_Achr5P07090_001 | EnsemblPlants:GSMUA_Achr5T07090_001 |
| InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 | UniProt:M0SWD8 | PFAM:PF00400 | ScanProsite:PS00678 |
| PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19918 | PANTHER:PTHR19918:SF31 | SMART:SM00320 | SUPFAM:SSF50978 |
| UniParc:UPI0002958976 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf |
Description
Protein FIZZY-RELATED 3 [Source:GMGC_GENE;Acc:GSMUA_Achr5G07090_001]
Coordinates
chr5:+:5132194..5136356
Molecular Weight (calculated)
49558.8 Da
IEP (calculated)
9.379
GRAVY (calculated)
-0.338
Length
454 amino acids
Sequence
(BLAST)
(BLAST)
001: MESSLRLDSI PAAHFPAIPK TPSPSKTTYG DRFIPCRSSS RLQNFALAEK PSPAKEGGND AYSRLLRAEL FGHDPAPYSP GAQGSPISPN KNLFRFKTDH
101: SGPSSPFSVT TVAAHDMAVE VSTPPKVPRK IPKTPHKVLD APSLQDDFYL NLVDWSSQNA LAVGLGTCVY LWSATTSKVT KLCDLGNRDG VSAIQWSREG
201: SYIAIGTSLG DVQIWDGTKC KKIRSMGGHL TRTGVLAWNS CILSSGSRDK NILHHDLRVP GDFVSKLVGH RSEVCGLKWS HDDRELASGG NDNQLLIWNQ
301: RSQSPLLKLT EHTAAVKAIT WSPHQHSLVA SGGGTADRCI RFWNTCNGNM LNCVDTGSQV CNLAWSKNVN ELVSTHGYSQ NQIMVWKYPS LSKVATLTGH
401: TLRVLYLAMS PDGQTIVTGA GDETLRFWNV FPSMKTPAPV RDTGVWSLGR THIR
101: SGPSSPFSVT TVAAHDMAVE VSTPPKVPRK IPKTPHKVLD APSLQDDFYL NLVDWSSQNA LAVGLGTCVY LWSATTSKVT KLCDLGNRDG VSAIQWSREG
201: SYIAIGTSLG DVQIWDGTKC KKIRSMGGHL TRTGVLAWNS CILSSGSRDK NILHHDLRVP GDFVSKLVGH RSEVCGLKWS HDDRELASGG NDNQLLIWNQ
301: RSQSPLLKLT EHTAAVKAIT WSPHQHSLVA SGGGTADRCI RFWNTCNGNM LNCVDTGSQV CNLAWSKNVN ELVSTHGYSQ NQIMVWKYPS LSKVATLTGH
401: TLRVLYLAMS PDGQTIVTGA GDETLRFWNV FPSMKTPAPV RDTGVWSLGR THIR
001: MASPQSTKTG LNLPAGMNQT SLRLETFSSS FRGISSLSSP SKSTCSDRFI PCRSSSRLHA FDLQDKEPTT PVKEGGNEAY SRLLKSELFG SDFASPLLSP
101: AGGQGSASSP MSPCTNMLRF KTDRSNSSPS SPFSPSILGN DNGHSSDSSP PPKPPRKVPK TPHKVLDAPS LQDDFYLNVV DWSSQNVLAV GLGTCVYLWT
201: ASNSKVTKLC DLGPNDSVCS VQWTREGSYI SIGTSHGQVQ VWDGTQCKRV RTMGGHQTRT GVLAWNSRIL SSGSRDRNIL QHDIRVQSDF VSKLVGHKSE
301: VCGLKWSHDD RELASGGNDN QLLVWNNHSQ QPILKLTEHT AAVKAITWSP HQSSLLASGG GTADRCIRFW NTTNGNQLNS IDTGSQVCNL AWSKNVNEIV
401: STHGYSQNQI MLWKYPSMSK VATLTGHSMR VLYLATSPDG QTIVTGAGDE TLRFWNVFPS VKMQTPVKDT GLWSLGRTQI R
101: AGGQGSASSP MSPCTNMLRF KTDRSNSSPS SPFSPSILGN DNGHSSDSSP PPKPPRKVPK TPHKVLDAPS LQDDFYLNVV DWSSQNVLAV GLGTCVYLWT
201: ASNSKVTKLC DLGPNDSVCS VQWTREGSYI SIGTSHGQVQ VWDGTQCKRV RTMGGHQTRT GVLAWNSRIL SSGSRDRNIL QHDIRVQSDF VSKLVGHKSE
301: VCGLKWSHDD RELASGGNDN QLLVWNNHSQ QPILKLTEHT AAVKAITWSP HQSSLLASGG GTADRCIRFW NTTNGNQLNS IDTGSQVCNL AWSKNVNEIV
401: STHGYSQNQI MLWKYPSMSK VATLTGHSMR VLYLATSPDG QTIVTGAGDE TLRFWNVFPS VKMQTPVKDT GLWSLGRTQI R
Arabidopsis Description
FZR3Protein FIZZY-RELATED 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPL5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.