Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- cytosol 1
- nucleus 1
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G595600.1 | Wheat | plastid | 98.36 | 98.76 |
| TraesCS3D01G533000.1 | Wheat | plastid | 97.74 | 98.55 |
| Os01t0972900-01 | Rice | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 80.08 | 81.59 |
| EES02145 | Sorghum | plastid | 79.26 | 80.08 |
| Zm00001d041957_P004 | Maize | plastid | 79.47 | 79.79 |
| HORVU3Hr1G115170.1 | Barley | cytosol, mitochondrion, nucleus, plastid | 95.28 | 79.05 |
| GSMUA_Achr5P07090_001 | Banana | plastid | 70.84 | 75.99 |
| CDX70523 | Canola | plastid | 69.4 | 72.22 |
| CDX78541 | Canola | plastid | 69.2 | 72.01 |
| AT5G13840.1 | Thale cress | plastid | 69.82 | 70.69 |
| VIT_13s0019g01840.t01 | Wine grape | plastid | 68.17 | 70.49 |
| Bra006219.1-P | Field mustard | plastid | 69.4 | 69.55 |
| KRG97899 | Soybean | plastid | 68.17 | 67.89 |
| KRH30985 | Soybean | plastid | 69.2 | 67.4 |
| Solyc06g043150.2.1 | Tomato | nucleus, plastid | 68.17 | 66.53 |
| PGSC0003DMT400076326 | Potato | nucleus, plastid | 68.17 | 66.14 |
| CDY04804 | Canola | mitochondrion, plastid | 13.76 | 41.88 |
| TraesCS5A01G272600.1 | Wheat | plastid | 39.01 | 40.69 |
| TraesCS6A01G268900.1 | Wheat | plastid | 38.4 | 39.45 |
| TraesCS5A01G197800.2 | Wheat | mitochondrion, plastid | 37.37 | 38.24 |
| TraesCS2A01G440000.2 | Wheat | nucleus | 37.58 | 37.35 |
| TraesCS6A01G085400.1 | Wheat | nucleus | 27.93 | 35.6 |
| Os01t0973000-01 | Rice | cytosol | 0.82 | 1.42 |
Protein Annotations
| MapMan:13.3.4.1.3 | Gene3D:2.130.10.10 | InterPro:Cdc20/Fizzy | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010997 | GO:GO:0019538 |
| GO:GO:0030234 | GO:GO:0097027 | GO:GO:1904668 | InterPro:IPR001680 | InterPro:IPR015943 | InterPro:IPR017986 |
| PFAM:PF00400 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR19918 | PANTHER:PTHR19918:SF31 |
| SMART:SM00320 | SUPFAM:SSF50978 | EnsemblPlantsGene:TraesCS3A01G527600 | EnsemblPlants:TraesCS3A01G527600.1 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
| InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | TIGR:cd00200 | SEG:seg | : |
Description
No Description!
Coordinates
chr3A:-:741971493..741974617
Molecular Weight (calculated)
52209.3 Da
IEP (calculated)
9.934
GRAVY (calculated)
-0.384
Length
487 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAASGASV GAGAGAGAKP GRLNVPAGMA GSLRLDASSP ASSSSSVARL LEIPKTPSPS KVTYSDRFIP CRTSSRLHNF ALADRSSPGS GSRDDGSAYS
101: RLLRAELFGD ASSPGGDRQD SPGSNNLFRF KTDRSSAPSS PFAEKLDCAG GAGSPTPKKA PRKVPKTPHK VLDAPSLQDD FYLNLVDWSS QNMLAVGLGT
201: CVYLWSASSS KVTKLCDLGP RDSVCAVHWT REGSYLAVGT SLGDVQIWDS SRSKRIRNMG GHQTRAGVLA WNSTILSSGS RDKNILQHDI RVPTDYISKF
301: SGHRSEVCGL KWSHDDRELA SGGNDNQLLV WNQRSQQPVL RLTEHTAAVK AITWSPHQHS LVASGGGTAD RCIKFWNTAN GNMLNSIDTG SQVCNLAWCK
401: NVNELVSTHG YSQNQIMVWK YPSMSKVATL TGHTLRVLYL ATSPDGQTIV TGAGDETLRF WNIFPSMKAQ APARDAGLFS FPRSHIR
101: RLLRAELFGD ASSPGGDRQD SPGSNNLFRF KTDRSSAPSS PFAEKLDCAG GAGSPTPKKA PRKVPKTPHK VLDAPSLQDD FYLNLVDWSS QNMLAVGLGT
201: CVYLWSASSS KVTKLCDLGP RDSVCAVHWT REGSYLAVGT SLGDVQIWDS SRSKRIRNMG GHQTRAGVLA WNSTILSSGS RDKNILQHDI RVPTDYISKF
301: SGHRSEVCGL KWSHDDRELA SGGNDNQLLV WNQRSQQPVL RLTEHTAAVK AITWSPHQHS LVASGGGTAD RCIKFWNTAN GNMLNSIDTG SQVCNLAWCK
401: NVNELVSTHG YSQNQIMVWK YPSMSKVATL TGHTLRVLYL ATSPDGQTIV TGAGDETLRF WNIFPSMKAQ APARDAGLFS FPRSHIR
001: MASPQSTKTG LNLPAGMNQT SLRLETFSSS FRGISSLSSP SKSTCSDRFI PCRSSSRLHA FDLQDKEPTT PVKEGGNEAY SRLLKSELFG SDFASPLLSP
101: AGGQGSASSP MSPCTNMLRF KTDRSNSSPS SPFSPSILGN DNGHSSDSSP PPKPPRKVPK TPHKVLDAPS LQDDFYLNVV DWSSQNVLAV GLGTCVYLWT
201: ASNSKVTKLC DLGPNDSVCS VQWTREGSYI SIGTSHGQVQ VWDGTQCKRV RTMGGHQTRT GVLAWNSRIL SSGSRDRNIL QHDIRVQSDF VSKLVGHKSE
301: VCGLKWSHDD RELASGGNDN QLLVWNNHSQ QPILKLTEHT AAVKAITWSP HQSSLLASGG GTADRCIRFW NTTNGNQLNS IDTGSQVCNL AWSKNVNEIV
401: STHGYSQNQI MLWKYPSMSK VATLTGHSMR VLYLATSPDG QTIVTGAGDE TLRFWNVFPS VKMQTPVKDT GLWSLGRTQI R
101: AGGQGSASSP MSPCTNMLRF KTDRSNSSPS SPFSPSILGN DNGHSSDSSP PPKPPRKVPK TPHKVLDAPS LQDDFYLNVV DWSSQNVLAV GLGTCVYLWT
201: ASNSKVTKLC DLGPNDSVCS VQWTREGSYI SIGTSHGQVQ VWDGTQCKRV RTMGGHQTRT GVLAWNSRIL SSGSRDRNIL QHDIRVQSDF VSKLVGHKSE
301: VCGLKWSHDD RELASGGNDN QLLVWNNHSQ QPILKLTEHT AAVKAITWSP HQSSLLASGG GTADRCIRFW NTTNGNQLNS IDTGSQVCNL AWSKNVNEIV
401: STHGYSQNQI MLWKYPSMSK VATLTGHSMR VLYLATSPDG QTIVTGAGDE TLRFWNVFPS VKMQTPVKDT GLWSLGRTQI R
Arabidopsis Description
FZR3Protein FIZZY-RELATED 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPL5]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.