CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 4
plastid 5
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
EER92463
EER92655
EER93410
EER93574
EER95202
EER98238
EES02737
EES05908
EES05938
EES07517
EES11052
EES11053
EES11054
EES12664	endoplasmic reticulum
KXG20781
KXG20945	endoplasmic reticulum
KXG21309
KXG26629
KXG26630
KXG29757
KXG33895
KXG40187
OQU75650
OQU76760
OQU81862
OQU87155

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13840.1	EES02737	AT1G06590.1	20706207
AT5G13840.1	EER93410	AT1G14810.1	20706207
AT5G13840.1	EES12664	AT1G20610.1	20407024
AT5G13840.1	KXG20945	AT1G20610.1	20407024
AT5G13840.1	EER93574	AT1G23190.1	20706207
AT5G13840.1	EER95202	AT1G78770.1	20706207
AT5G13840.1	KXG20781	AT2G04660.1	20706207
AT5G13840.1	KXG33895	AT2G20000.1	17944809
AT5G13840.1	KXG33895	AT2G20000.1	20706207
AT5G13840.1	KXG40187	AT2G27960.1	20706207
AT5G13840.1	KXG40187	AT2G27970.1	20706207
AT5G13840.1	KXG21309	AT2G39090.1	20706207
AT5G13840.1	EES05938	AT3G20050.1	20706207
AT5G13840.1	EES07517	AT3G48150.1	20706207
AT5G13840.1	EES05908	AT4G21530.1	20706207
AT5G13840.1	OQU76760	AT4G34150.1	20706207
AT5G13840.1	EER92463	AT5G02530.1	20706207
AT5G13840.1	EER98238	AT5G02530.1	20706207
AT5G13840.1	OQU75650	AT5G02530.1	20706207
AT5G13840.1	EES11052	AT5G25460.1	20706207
AT5G13840.1	EES11053	AT5G25460.1	20706207
AT5G13840.1	EES11054	AT5G25460.1	20706207
AT5G13840.1	KXG26629	AT5G25460.1	20706207
AT5G13840.1	KXG26630	AT5G25460.1	20706207
AT5G13840.1	KXG29757	AT5G25460.1	20706207
AT5G13840.1	OQU81862	AT5G25460.1	20706207
AT5G13840.1	OQU87155	AT5G25460.1	20706207
AT5G13840.1	EER92655	AT5G26360.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041957_P004	Maize	plastid	97.51	96.91
Os01t0972900-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	84.85	85.56
TraesCS3D01G533000.1	Wheat	plastid	80.29	80.12
TraesCS3B01G595600.1	Wheat	plastid	80.5	80.0
TraesCS3A01G527600.1	Wheat	plastid	80.08	79.26
GSMUA_Achr5P07090_001	Banana	plastid	71.37	75.77
CDX70523	Canola	plastid	70.12	72.22
CDX78541	Canola	plastid	69.92	72.01
VIT_13s0019g01840.t01	Wine grape	plastid	70.12	71.76
AT5G13840.1	Thale cress	plastid	70.54	70.69
Bra006219.1-P	Field mustard	plastid	70.12	69.55
PGSC0003DMT400076326	Potato	nucleus, plastid	70.95	68.13
Solyc06g043150.2.1	Tomato	nucleus, plastid	70.33	67.94
KRG97899	Soybean	plastid	68.67	67.69
HORVU3Hr1G115170.1	Barley	cytosol, mitochondrion, nucleus, plastid	81.12	66.61
KRH30985	Soybean	plastid	68.26	65.8
OQU82251	Sorghum	cytosol	17.43	48.0
CDY04804	Canola	mitochondrion, plastid	14.11	42.5
OQU93351	Sorghum	nucleus	60.79	42.1
KXG30937	Sorghum	nucleus	39.21	40.13
EES06634	Sorghum	nucleus	39.42	40.0
KXG27036	Sorghum	cytosol	13.28	35.36
Os01t0973000-01	Rice	cytosol	1.04	1.78

Protein Annotations

MapMan:13.3.4.1.3	Gene3D:2.130.10.10	EntrezGene:8078056	UniProt:C5XJE3	InterPro:Cdc20/Fizzy	EnsemblPlants:EES02145
ProteinID:EES02145	ProteinID:EES02145.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010997	GO:GO:0019538	GO:GO:0030234
GO:GO:0097027	GO:GO:1904668	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF08662
ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19918	PANTHER:PTHR19918:SF31	SMART:SM00320
EnsemblPlantsGene:SORBI_3003G444100	SUPFAM:SSF50978	InterPro:TIF_beta_prop-like	UniParc:UPI0001A84D0F	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	RefSeq:XP_002457025.1	SEG:seg	:

Description

hypothetical protein

Coordinates

chr3:+:74252301..74256013

Molecular Weight (calculated)

52338.8 Da

IEP (calculated)

9.534

GRAVY (calculated)

-0.399

Length

482 amino acids

Sequence
(BLAST)

001: MTLAAPASDA KPRLNVPPSM AAALRLDPVG LGAGPSTPSP SRRLAEPPKT PSPSKTTYSD RFIPCRSSSR LQNFALLDSP LSPAKDDTPY SRLLRAELFG
101: PDSPKPATAA SASPNTNLFR FKKDHSAPTS PFAKAAAAHH DCTAGSGDAP SPQKPPRKVP KTPHKVLDAP SLQDDFYLNL VDWSSQNVLA VGLGTCVYLW
201: SASNSKVTKL CDLGPRDSVC AVHWSREGSY LSIGTGLGDV QIWDSSRCKR IRNMGGHQTR TGVLAWSSCI LSSGSRDKNI LQHDIRVPSD YISKFCGHRS
301: EVCGLKWSHD DRELASGGND NQLLVWNQRS QQPVLQLTEH TAAVKAIAWS PHQQGLLASG GGTADRCIRF WNTANGNVLN SIDTGSQVCN LAWCKNVNEL
401: VSTHGYSQNQ IMVWKYPSMS KVATLTGHTM RVLYLASSPD GQTIVTGAGD ETLRFWNIFP SVKTQTPVRD IGLWSFSRSH IR

Best Arabidopsis Sequence Match ( AT5G13840.1 )
(BLAST)

001: MASPQSTKTG LNLPAGMNQT SLRLETFSSS FRGISSLSSP SKSTCSDRFI PCRSSSRLHA FDLQDKEPTT PVKEGGNEAY SRLLKSELFG SDFASPLLSP
101: AGGQGSASSP MSPCTNMLRF KTDRSNSSPS SPFSPSILGN DNGHSSDSSP PPKPPRKVPK TPHKVLDAPS LQDDFYLNVV DWSSQNVLAV GLGTCVYLWT
201: ASNSKVTKLC DLGPNDSVCS VQWTREGSYI SIGTSHGQVQ VWDGTQCKRV RTMGGHQTRT GVLAWNSRIL SSGSRDRNIL QHDIRVQSDF VSKLVGHKSE
301: VCGLKWSHDD RELASGGNDN QLLVWNNHSQ QPILKLTEHT AAVKAITWSP HQSSLLASGG GTADRCIRFW NTTNGNQLNS IDTGSQVCNL AWSKNVNEIV
401: STHGYSQNQI MLWKYPSMSK VATLTGHSMR VLYLATSPDG QTIVTGAGDE TLRFWNVFPS VKMQTPVKDT GLWSLGRTQI R

Arabidopsis Description

FZR3Protein FIZZY-RELATED 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPL5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.