Factsheet for Bra006219.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001174.1-P
Bra001773.1-P
Bra004677.1-P
Bra005063.1-P
Bra005728.1-P
Bra007362.1-P
Bra009581.1-P
Bra009841.1-P
Bra011500.1-P
Bra013534.1-P
Bra015512.1-P
Bra016357.1-P
Bra016460.1-P	endoplasmic reticulum
Bra016680.1-P
Bra017628.1-P
Bra018081.1-P
Bra020500.1-P
Bra024568.1-P
Bra025616.1-P
Bra025831.1-P	endoplasmic reticulum
Bra026186.1-P
Bra026527.1-P
Bra028905.1-P
Bra032414.1-P
Bra033769.1-P
Bra034380.1-P
Bra034611.1-P
Bra035062.1-P
Bra035820.1-P
Bra037691.1-P
Bra038252.1-P
Bra039034.1-P
Bra040242.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G13840.1	Bra015512.1-P	AT1G06590.1	20706207
AT5G13840.1	Bra032414.1-P	AT1G06590.1	20706207
AT5G13840.1	Bra016680.1-P	AT1G14810.1	20706207
AT5G13840.1	Bra026186.1-P	AT1G14810.1	20706207
AT5G13840.1	Bra016460.1-P	AT1G20610.1	20407024
AT5G13840.1	Bra025831.1-P	AT1G20610.1	20407024
AT5G13840.1	Bra016357.1-P	AT1G23190.1	20706207
AT5G13840.1	Bra024568.1-P	AT1G23190.1	20706207
AT5G13840.1	Bra035062.1-P	AT1G78770.1	20706207
AT5G13840.1	Bra025616.1-P	AT2G04660.1	20706207
AT5G13840.1	Bra028905.1-P	AT2G04660.1	20706207
AT5G13840.1	Bra039034.1-P	AT2G20000.1	17944809
AT5G13840.1	Bra039034.1-P	AT2G20000.1	20706207
AT5G13840.1	Bra034380.1-P	AT2G27970.1	20706207
AT5G13840.1	Bra005063.1-P	AT2G39090.1	20706207
AT5G13840.1	Bra004677.1-P	AT2G42260.1	20706207
AT5G13840.1	Bra001773.1-P	AT3G20050.1	20706207
AT5G13840.1	Bra035820.1-P	AT3G20050.1	20706207
AT5G13840.1	Bra038252.1-P	AT3G20050.1	20706207
AT5G13840.1	Bra026527.1-P	AT3G29800.1	20706207
AT5G13840.1	Bra037691.1-P	AT3G29800.1	20706207
AT5G13840.1	Bra018081.1-P	AT3G48150.1	20706207
AT5G13840.1	Bra033769.1-P	AT3G48150.1	20706207
AT5G13840.1	Bra007362.1-P	AT3G57860.1	20706207
AT5G13840.1	Bra013534.1-P	AT4G21530.1	20706207
AT5G13840.1	Bra011500.1-P	AT4G34150.1	20706207
AT5G13840.1	Bra017628.1-P	AT4G34150.1	20706207
AT5G13840.1	Bra034611.1-P	AT4G34150.1	20706207
AT5G13840.1	Bra005728.1-P	AT5G02530.1	20706207
AT5G13840.1	Bra009581.1-P	AT5G02530.1	20706207
AT5G13840.1	Bra009841.1-P	AT5G25460.1	20706207
AT5G13840.1	Bra020500.1-P	AT5G25460.1	20706207
AT5G13840.1	Bra001174.1-P	AT5G26360.1	20706207
AT5G13840.1	Bra040242.1-P	AT5G26360.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78541	Canola	plastid	96.09	99.79
AT5G13840.1	Thale cress	plastid	95.68	96.67
VIT_13s0019g01840.t01	Wine grape	plastid	81.07	83.65
KRG97899	Soybean	plastid	80.86	80.37
KRH30985	Soybean	plastid	82.51	80.2
PGSC0003DMT400076326	Potato	nucleus, plastid	80.45	77.89
Solyc06g043150.2.1	Tomato	nucleus, plastid	79.42	77.35
GSMUA_Achr5P07090_001	Banana	plastid	70.16	75.11
Os01t0972900-01	Rice	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	69.55	70.71
TraesCS3D01G533000.1	Wheat	plastid	69.75	70.19
EES02145	Sorghum	plastid	69.55	70.12
TraesCS3B01G595600.1	Wheat	plastid	69.96	70.1
TraesCS3A01G527600.1	Wheat	plastid	69.55	69.4
Zm00001d041957_P004	Maize	plastid	68.93	69.07
Bra019347.1-P	Field mustard	nucleus, plastid	58.85	60.85
Bra013655.1-P	Field mustard	nucleus, plastid	58.23	60.08
Bra000756.1-P	Field mustard	nucleus	57.82	59.79
Bra029426.1-P	Field mustard	nucleus	58.23	59.58
HORVU3Hr1G115170.1	Barley	cytosol, mitochondrion, nucleus, plastid	69.34	57.41
Bra008327.1-P	Field mustard	cytosol, mitochondrion	37.45	42.52
Bra005544.1-P	Field mustard	nucleus	37.86	41.91
Bra037011.1-P	Field mustard	nucleus	34.77	40.33
Bra034555.1-P	Field mustard	nucleus	30.86	39.58
Bra011430.1-P	Field mustard	cytosol	38.68	26.29
Os01t0973000-01	Rice	cytosol	1.03	1.78

Protein Annotations

MapMan:13.3.4.1.3	Gene3D:2.130.10.10	InterPro:Apc4_WD40_dom	EnsemblPlantsGene:Bra006219	EnsemblPlants:Bra006219.1	EnsemblPlants:Bra006219.1-P
InterPro:Cdc20/Fizzy	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010997	GO:GO:0019538	GO:GO:0030234	GO:GO:0097027
GO:GO:1904668	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	UniProt:M4CPT0	PFAM:PF00400
PFAM:PF12894	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19918	PANTHER:PTHR19918:SF31
SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000253FACB	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS
InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	SEG:seg	:	:	:

Description

AT5G13840 (E=2e-235) FZR3 | FZR3 (FIZZY-RELATED 3); signal transducer

Coordinates

chrA03:-:2582899..2585489

Molecular Weight (calculated)

52881.0 Da

IEP (calculated)

9.142

GRAVY (calculated)

-0.493

Length

486 amino acids

Sequence
(BLAST)

001: MESPQKTKTG LNLPAGMNQT SLRLETFSSS FRGISTLSSP SKSTCSDRFI PCRSSSRLHA FDLQDKEPTT PVKEGGNEAY SRLLKSELFG SDFVSNSLSP
101: AGGGGGQGGS ASSPMSPCTS NMLRFKTDRS NSSPCSPFSP SILGNDNGLS SDSSPPPKPP RKVPKTPHKV LDAPSLQDDF YLNVVDWSSQ NVLAVGLGTC
201: VYLWSASNSK VTKLCDLGPN DSVCSLQWTR EGSYISVGTS HGQVQVWDGT QCKRVRTMGG HQTRTGVLAW NSRILSSGSR DRNILQHDIR VQSDYVSKLV
301: GHKSEVCGLK WSHDDRELAS GGNDNQLLVW NNHSQQPIHK LTEHTAAVKA ITWSPHQSSL LASGGGTADR CIRFWNTTNG HQLNSIDTGS QVCNLAWSKN
401: VNEIVSTHGY SQNQIMLWKY PSMAKVATLT GHSMRVLYLA TSPDGQTIVT GAGDETLRFW NVFPSVKMQT PVRDTGLWSL GRTQIR

Best Arabidopsis Sequence Match ( AT5G13840.1 )
(BLAST)

001: MASPQSTKTG LNLPAGMNQT SLRLETFSSS FRGISSLSSP SKSTCSDRFI PCRSSSRLHA FDLQDKEPTT PVKEGGNEAY SRLLKSELFG SDFASPLLSP
101: AGGQGSASSP MSPCTNMLRF KTDRSNSSPS SPFSPSILGN DNGHSSDSSP PPKPPRKVPK TPHKVLDAPS LQDDFYLNVV DWSSQNVLAV GLGTCVYLWT
201: ASNSKVTKLC DLGPNDSVCS VQWTREGSYI SIGTSHGQVQ VWDGTQCKRV RTMGGHQTRT GVLAWNSRIL SSGSRDRNIL QHDIRVQSDF VSKLVGHKSE
301: VCGLKWSHDD RELASGGNDN QLLVWNNHSQ QPILKLTEHT AAVKAITWSP HQSSLLASGG GTADRCIRFW NTTNGNQLNS IDTGSQVCNL AWSKNVNEIV
401: STHGYSQNQI MLWKYPSMSK VATLTGHSMR VLYLATSPDG QTIVTGAGDE TLRFWNVFPS VKMQTPVKDT GLWSLGRTQI R

Arabidopsis Description

FZR3Protein FIZZY-RELATED 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LPL5]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.