Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 3
- cytosol 1
- mitochondrion 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30431 | Canola | mitochondrion | 99.5 | 97.53 |
| Bra026527.1-P | Field mustard | cytosol, extracellular, nucleus | 21.41 | 54.14 |
| AT3G29800.1 | Thale cress | extracellular, mitochondrion | 55.92 | 50.45 |
Protein Annotations
| EnsemblPlants:Bra037691.1 | EnsemblPlants:Bra037691.1-P | EnsemblPlantsGene:Bra037691 | Gene3D:3.40.50.300 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:ATPase_AAA_core | InterPro:P-loop_NTPase | PANTHER:PTHR23070 | PANTHER:PTHR23070:SF35 |
| PFAM:PF00004 | SEG:seg | SUPFAM:SSF52540 | UniParc:UPI0002543E70 | UniProt:M4F9C8 | MapMan:35.1 |
Description
AT3G29800 (E=3e-113) | AAA-type ATPase family
Coordinates
chrA04:+:18172507..18173848
Molecular Weight (calculated)
45740.7 Da
IEP (calculated)
5.550
GRAVY (calculated)
-0.255
Length
397 amino acids
Sequence
(BLAST)
(BLAST)
001: MFQAITRPIQ YLIISYLRYV SGSPSLTDTK HDHYVTTLVI EHSYKSVREN ILYSSTHAYV FNKLGIHPVN YHVGELTLAD SYQGIELSWR IFYNNKSIGR
101: ESFELKFDKR HKDLVYNSYL PYVESTTKEM TTIPEVHIYS HSFDTWETKP LEHHSTFETI AMKEELKRGL IHDLDMFVQR KDLYDRAGRP WTRSYLLYGP
201: PGTGKTSLVV AMAKYLNFDV YDLQLSRAVE CYFNPRKLLS GVMNNSILLV EDIDEGSTVL VLSKLLSSLT LGTPWGEARI VIFTTKNKDM IDPTLLSRMS
301: MEIYMGHCCF EGFKVLASNY LGLSHVDNDE PHRLYRDIKR LIDGQVITPA QVTVELMESE DVDVVLEGLV TTLESLTSDK IDDDEDEEKH LACLRDL
101: ESFELKFDKR HKDLVYNSYL PYVESTTKEM TTIPEVHIYS HSFDTWETKP LEHHSTFETI AMKEELKRGL IHDLDMFVQR KDLYDRAGRP WTRSYLLYGP
201: PGTGKTSLVV AMAKYLNFDV YDLQLSRAVE CYFNPRKLLS GVMNNSILLV EDIDEGSTVL VLSKLLSSLT LGTPWGEARI VIFTTKNKDM IDPTLLSRMS
301: MEIYMGHCCF EGFKVLASNY LGLSHVDNDE PHRLYRDIKR LIDGQVITPA QVTVELMESE DVDVVLEGLV TTLESLTSDK IDDDEDEEKH LACLRDL
001: MMLKLIKSMV QAITRPIQYL IISYLRYLVG PPSLTHHDNQ VTVIIEETSE NGRINVIHGA TQAYLFDKIN LDFVEEREFD DIYQGAKLKW RIFVDKNNIG
101: NIPKQCFELR FDEKHRDLVF DSYIPFVESK AKEIKSKKRI LEMHTYSHCC DTWETKILDH HSSFETIVMK EDLKRRLIDD IDLFISKEDF YKRVGRHWMR
201: YYLLHGLPGA GKTSLVAAIA KYLNFDVYNI TQGVKTDFDT RRLIRRVEDS SILLVEDIDT SLEGSKVALS QLLSSLTWPW SNGKARVVIF TTNNKERFDQ
301: TLLCRMEMKI YMGHCCFEDF KTLASNYLGI SHDNDAPHRL YPDIKRLIDG QAVTPGQVVE ELMKSQDVDV ALQSLVRYSS SKENDHIDDD LPQIPEETRK
401: NSNLDSKPRK SQTIIVEALN QVRCNETETG SNIDYSSNEK
101: NIPKQCFELR FDEKHRDLVF DSYIPFVESK AKEIKSKKRI LEMHTYSHCC DTWETKILDH HSSFETIVMK EDLKRRLIDD IDLFISKEDF YKRVGRHWMR
201: YYLLHGLPGA GKTSLVAAIA KYLNFDVYNI TQGVKTDFDT RRLIRRVEDS SILLVEDIDT SLEGSKVALS QLLSSLTWPW SNGKARVVIF TTNNKERFDQ
301: TLLCRMEMKI YMGHCCFEDF KTLASNYLGI SHDNDAPHRL YPDIKRLIDG QAVTPGQVVE ELMKSQDVDV ALQSLVRYSS SKENDHIDDD LPQIPEETRK
401: NSNLDSKPRK SQTIIVEALN QVRCNETETG SNIDYSSNEK
Arabidopsis Description
Mitochondrial protein-like contains similarity to AAA-type ATPase [Source:UniProtKB/TrEMBL;Acc:Q9LJ50]
SUBAcon: [mitochondrion,extracellular]
SUBAcon: [mitochondrion,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.