Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 4
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra037691.1-P | Field mustard | mitochondrion | 97.53 | 99.5 |
| CDY23390 | Canola | mitochondrion | 95.8 | 97.73 |
| CDY49701 | Canola | cytosol, extracellular, nucleus | 20.99 | 54.14 |
| AT3G29800.1 | Thale cress | extracellular, mitochondrion | 56.79 | 52.27 |
| CDY52774 | Canola | cytosol | 17.28 | 48.61 |
Protein Annotations
| EnsemblPlants:CDY30431 | EnsemblPlantsGene:GSBRNA2T00045131001 | Gene3D:3.40.50.300 | GO:A0A078GY41 | GO:GO:0000166 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005524 | InterPro:ATPase_AAA_core | InterPro:P-loop_NTPase | PANTHER:PTHR23070 | PANTHER:PTHR23070:SF35 |
| PFAM:PF00004 | ProteinID:CDY30431 | ProteinID:CDY30431.1 | SEG:seg | SUPFAM:SSF52540 | UniParc:UPI0004EE90E0 |
| UniProt:A0A078GY41 | MapMan:35.1 | : | : | : | : |
Description
BnaA04g25320DBnaA04g25320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GY41]
Coordinates
chrLK032253:+:248975..250336
Molecular Weight (calculated)
46716.1 Da
IEP (calculated)
5.834
GRAVY (calculated)
-0.215
Length
405 amino acids
Sequence
(BLAST)
(BLAST)
001: MMIKLIKSMF QAITRPIQYL IISYLRYVSG SPSLTDTKHD HYVTTLVIEH SYKFVRENIL YSSTHAYVFN KLGIHPVNYH VGELTLADSY QGIELSWRIF
101: YNNKSIGRES FELKFDKRHK DLVYNSYLPY VESTAKEMTT IPEVHIYSHS FDTWETKPLE HHSTFETIAM KEELKRGLIH DLDMFVQRKD LYDRAGRPWT
201: RSYLLYGPPG TGKTSLVVAM AKYLNFDVYD LQLSRAVECY FNPRKLLSGV MNNSILLVED IDEGSTVLVL SKLLSSLTLG TPWGEARIVI FTTKNKDMID
301: PTLLSRMSME IYMGHCCFEG FKVLASNYLG LSHVDNDEPH RLYRDIKRLI DGQVITPAQV TVELMESEDV DVVLEGLVTT LESLTSDKID DDEDEEKHLA
401: CLRDL
101: YNNKSIGRES FELKFDKRHK DLVYNSYLPY VESTAKEMTT IPEVHIYSHS FDTWETKPLE HHSTFETIAM KEELKRGLIH DLDMFVQRKD LYDRAGRPWT
201: RSYLLYGPPG TGKTSLVVAM AKYLNFDVYD LQLSRAVECY FNPRKLLSGV MNNSILLVED IDEGSTVLVL SKLLSSLTLG TPWGEARIVI FTTKNKDMID
301: PTLLSRMSME IYMGHCCFEG FKVLASNYLG LSHVDNDEPH RLYRDIKRLI DGQVITPAQV TVELMESEDV DVVLEGLVTT LESLTSDKID DDEDEEKHLA
401: CLRDL
001: MMLKLIKSMV QAITRPIQYL IISYLRYLVG PPSLTHHDNQ VTVIIEETSE NGRINVIHGA TQAYLFDKIN LDFVEEREFD DIYQGAKLKW RIFVDKNNIG
101: NIPKQCFELR FDEKHRDLVF DSYIPFVESK AKEIKSKKRI LEMHTYSHCC DTWETKILDH HSSFETIVMK EDLKRRLIDD IDLFISKEDF YKRVGRHWMR
201: YYLLHGLPGA GKTSLVAAIA KYLNFDVYNI TQGVKTDFDT RRLIRRVEDS SILLVEDIDT SLEGSKVALS QLLSSLTWPW SNGKARVVIF TTNNKERFDQ
301: TLLCRMEMKI YMGHCCFEDF KTLASNYLGI SHDNDAPHRL YPDIKRLIDG QAVTPGQVVE ELMKSQDVDV ALQSLVRYSS SKENDHIDDD LPQIPEETRK
401: NSNLDSKPRK SQTIIVEALN QVRCNETETG SNIDYSSNEK
101: NIPKQCFELR FDEKHRDLVF DSYIPFVESK AKEIKSKKRI LEMHTYSHCC DTWETKILDH HSSFETIVMK EDLKRRLIDD IDLFISKEDF YKRVGRHWMR
201: YYLLHGLPGA GKTSLVAAIA KYLNFDVYNI TQGVKTDFDT RRLIRRVEDS SILLVEDIDT SLEGSKVALS QLLSSLTWPW SNGKARVVIF TTNNKERFDQ
301: TLLCRMEMKI YMGHCCFEDF KTLASNYLGI SHDNDAPHRL YPDIKRLIDG QAVTPGQVVE ELMKSQDVDV ALQSLVRYSS SKENDHIDDD LPQIPEETRK
401: NSNLDSKPRK SQTIIVEALN QVRCNETETG SNIDYSSNEK
Arabidopsis Description
Mitochondrial protein-like contains similarity to AAA-type ATPase [Source:UniProtKB/TrEMBL;Acc:Q9LJ50]
SUBAcon: [mitochondrion,extracellular]
SUBAcon: [mitochondrion,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.