Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY49701 | Canola | cytosol, extracellular, nucleus | 43.06 | 39.49 |
| CDY23390 | Canola | mitochondrion | 48.61 | 17.63 |
| CDY30431 | Canola | mitochondrion | 48.61 | 17.28 |
| AT3G29800.1 | Thale cress | extracellular, mitochondrion | 43.06 | 14.09 |
Protein Annotations
| EnsemblPlants:CDY52774 | EnsemblPlantsGene:GSBRNA2T00007827001 | InterPro:P-loop_NTPase | PANTHER:PTHR23070 | PANTHER:PTHR23070:SF35 | ProteinID:CDY52774 |
| ProteinID:CDY52774.1 | SUPFAM:SSF52540 | UniParc:UPI0004EEBFD8 | UniProt:A0A078ITL5 | MapMan:35.1 | : |
Description
BnaC02g47940DBnaC02g47940D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ITL5]
Coordinates
chrLK033129:+:22411..22845
Molecular Weight (calculated)
16436.3 Da
IEP (calculated)
9.258
GRAVY (calculated)
-0.107
Length
144 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRARIIVIF TTNNKDMLNP TLLSRISVDI YMGHCCFEGF KVLASNYWGP LMSMMMSHTH TVYPDIKRLI DGQVITPAQI TEELMKSEDV CHIPGPRPIF
101: NDKVRNDLIH FDKILGFSLS SSIKRRQPLR FSPVTKKLSE ALPD
101: NDKVRNDLIH FDKILGFSLS SSIKRRQPLR FSPVTKKLSE ALPD
001: MMLKLIKSMV QAITRPIQYL IISYLRYLVG PPSLTHHDNQ VTVIIEETSE NGRINVIHGA TQAYLFDKIN LDFVEEREFD DIYQGAKLKW RIFVDKNNIG
101: NIPKQCFELR FDEKHRDLVF DSYIPFVESK AKEIKSKKRI LEMHTYSHCC DTWETKILDH HSSFETIVMK EDLKRRLIDD IDLFISKEDF YKRVGRHWMR
201: YYLLHGLPGA GKTSLVAAIA KYLNFDVYNI TQGVKTDFDT RRLIRRVEDS SILLVEDIDT SLEGSKVALS QLLSSLTWPW SNGKARVVIF TTNNKERFDQ
301: TLLCRMEMKI YMGHCCFEDF KTLASNYLGI SHDNDAPHRL YPDIKRLIDG QAVTPGQVVE ELMKSQDVDV ALQSLVRYSS SKENDHIDDD LPQIPEETRK
401: NSNLDSKPRK SQTIIVEALN QVRCNETETG SNIDYSSNEK
101: NIPKQCFELR FDEKHRDLVF DSYIPFVESK AKEIKSKKRI LEMHTYSHCC DTWETKILDH HSSFETIVMK EDLKRRLIDD IDLFISKEDF YKRVGRHWMR
201: YYLLHGLPGA GKTSLVAAIA KYLNFDVYNI TQGVKTDFDT RRLIRRVEDS SILLVEDIDT SLEGSKVALS QLLSSLTWPW SNGKARVVIF TTNNKERFDQ
301: TLLCRMEMKI YMGHCCFEDF KTLASNYLGI SHDNDAPHRL YPDIKRLIDG QAVTPGQVVE ELMKSQDVDV ALQSLVRYSS SKENDHIDDD LPQIPEETRK
401: NSNLDSKPRK SQTIIVEALN QVRCNETETG SNIDYSSNEK
Arabidopsis Description
Mitochondrial protein-like contains similarity to AAA-type ATPase [Source:UniProtKB/TrEMBL;Acc:Q9LJ50]
SUBAcon: [mitochondrion,extracellular]
SUBAcon: [mitochondrion,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.