Subcellular Localization
min:
: max
Winner_takes_all: extracellular, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- nucleus 2
- mitochondrion 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra026527.1-P | Field mustard | cytosol, extracellular, nucleus | 100.0 | 100.0 |
| CDY52774 | Canola | cytosol | 39.49 | 43.06 |
| CDY23390 | Canola | mitochondrion | 54.14 | 21.41 |
| CDY30431 | Canola | mitochondrion | 54.14 | 20.99 |
| AT3G29800.1 | Thale cress | extracellular, mitochondrion | 42.04 | 15.0 |
Protein Annotations
| EnsemblPlants:CDY49701 | EnsemblPlantsGene:GSBRNA2T00093599001 | Gene3D:3.40.50.300 | InterPro:P-loop_NTPase | PANTHER:PTHR23070 | PANTHER:PTHR23070:SF35 |
| ProteinID:CDY49701 | ProteinID:CDY49701.1 | SEG:seg | SUPFAM:SSF52540 | UniParc:UPI00025464E3 | UniProt:A0A078IIA2 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaA02g27400DBnaA02g27400D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IIA2]
Coordinates
chrLK032853:-:113619..114393
Molecular Weight (calculated)
17412.5 Da
IEP (calculated)
5.158
GRAVY (calculated)
0.340
Length
157 amino acids
Sequence
(BLAST)
(BLAST)
001: MSTILIGSSK GKISTIELGD LGREITCCMV LPGRGSTVLA LSDLLRSLVL GTPWGEARII VIFTTNNLDM LDPTLLSRIS VDIYMGHCCF EGFKVLASNY
101: WASLMTMMMS YTVSIQTSSV LLMDKLSHQY KSELMKSEDV NVVIEDLVRT LESFNSR
101: WASLMTMMMS YTVSIQTSSV LLMDKLSHQY KSELMKSEDV NVVIEDLVRT LESFNSR
001: MMLKLIKSMV QAITRPIQYL IISYLRYLVG PPSLTHHDNQ VTVIIEETSE NGRINVIHGA TQAYLFDKIN LDFVEEREFD DIYQGAKLKW RIFVDKNNIG
101: NIPKQCFELR FDEKHRDLVF DSYIPFVESK AKEIKSKKRI LEMHTYSHCC DTWETKILDH HSSFETIVMK EDLKRRLIDD IDLFISKEDF YKRVGRHWMR
201: YYLLHGLPGA GKTSLVAAIA KYLNFDVYNI TQGVKTDFDT RRLIRRVEDS SILLVEDIDT SLEGSKVALS QLLSSLTWPW SNGKARVVIF TTNNKERFDQ
301: TLLCRMEMKI YMGHCCFEDF KTLASNYLGI SHDNDAPHRL YPDIKRLIDG QAVTPGQVVE ELMKSQDVDV ALQSLVRYSS SKENDHIDDD LPQIPEETRK
401: NSNLDSKPRK SQTIIVEALN QVRCNETETG SNIDYSSNEK
101: NIPKQCFELR FDEKHRDLVF DSYIPFVESK AKEIKSKKRI LEMHTYSHCC DTWETKILDH HSSFETIVMK EDLKRRLIDD IDLFISKEDF YKRVGRHWMR
201: YYLLHGLPGA GKTSLVAAIA KYLNFDVYNI TQGVKTDFDT RRLIRRVEDS SILLVEDIDT SLEGSKVALS QLLSSLTWPW SNGKARVVIF TTNNKERFDQ
301: TLLCRMEMKI YMGHCCFEDF KTLASNYLGI SHDNDAPHRL YPDIKRLIDG QAVTPGQVVE ELMKSQDVDV ALQSLVRYSS SKENDHIDDD LPQIPEETRK
401: NSNLDSKPRK SQTIIVEALN QVRCNETETG SNIDYSSNEK
Arabidopsis Description
Mitochondrial protein-like contains similarity to AAA-type ATPase [Source:UniProtKB/TrEMBL;Acc:Q9LJ50]
SUBAcon: [mitochondrion,extracellular]
SUBAcon: [mitochondrion,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.