Factsheet for Bra034555.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 5
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra001174.1-P
Bra001423.1-P
Bra004677.1-P
Bra005063.1-P
Bra007362.1-P
Bra013534.1-P
Bra015512.1-P
Bra018081.1-P
Bra025616.1-P
Bra026274.1-P
Bra028905.1-P
Bra032414.1-P
Bra033769.1-P
Bra034807.1-P
Bra035062.1-P
Bra038682.1-P
Bra039034.1-P
Bra040242.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT4G33270.1	Bra015512.1-P	AT1G06590.1	20706207
AT4G33270.1	Bra032414.1-P	AT1G06590.1	20706207
AT4G33270.1	Bra035062.1-P	AT1G78770.1	20706207
AT4G33270.1	Bra025616.1-P	AT2G04660.1	20706207
AT4G33270.1	Bra028905.1-P	AT2G04660.1	20706207
AT4G33270.1	Bra039034.1-P	AT2G20000.1	17944809
AT4G33270.1	Bra039034.1-P	AT2G20000.1	20706207
AT4G33270.1	Bra005063.1-P	AT2G39090.1	20706207
AT4G33270.1	Bra004677.1-P	AT2G42260.1	20706207
AT4G33270.1	Bra001423.1-P	AT3G11830.1	20706207
AT4G33270.1	Bra034807.1-P	AT3G11830.1	20706207
AT4G33270.1	Bra038682.1-P	AT3G11830.1	20706207
AT4G33270.1	Bra018081.1-P	AT3G48150.1	20706207
AT4G33270.1	Bra033769.1-P	AT3G48150.1	20706207
AT4G33270.1	Bra007362.1-P	AT3G57860.1	20706207
AT4G33270.1	Bra013534.1-P	AT4G21530.1	20706207
AT4G33270.1	Bra026274.1-P	AT4G28230.1	20706207
AT4G33270.1	Bra001174.1-P	AT5G26360.1	20706207
AT4G33270.1	Bra040242.1-P	AT5G26360.1	20706207

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13491	Canola	cytosol	83.11	85.6
AT4G33260.1	Thale cress	nucleus	85.75	72.71
AT4G33270.1	Thale cress	nucleus	86.28	71.55
Bra037011.1-P	Field mustard	nucleus	78.63	71.12
OQU82251	Sorghum	cytosol	30.61	66.29
Bra005544.1-P	Field mustard	nucleus	71.24	61.5
GSMUA_AchrUn_...	Banana	cytosol	13.72	59.77
KRH68047	Soybean	nucleus	70.98	58.86
KRH44738	Soybean	nucleus	68.07	58.37
GSMUA_Achr1P27660_001	Banana	mitochondrion	24.54	57.76
CDY28289	Canola	cytosol, extracellular, mitochondrion, plastid	29.02	56.99
KRG94456	Soybean	cytosol	34.83	56.17
GSMUA_Achr1P27670_001	Banana	cytosol	9.23	55.56
TraesCS5A01G272600.1	Wheat	plastid	68.07	55.25
TraesCS5D01G280600.1	Wheat	plastid	68.07	55.13
TraesCS5B01G272800.1	Wheat	plastid	68.07	55.13
KXG30937	Sorghum	nucleus	68.34	54.99
Os02t0700100-01	Rice	extracellular	67.81	54.8
TraesCS6A01G268900.1	Wheat	plastid	68.34	54.64
TraesCS6B01G296200.1	Wheat	plastid	68.34	54.64
Bra008327.1-P	Field mustard	cytosol, mitochondrion	61.48	54.44
TraesCS6D01G246000.1	Wheat	plastid	68.07	54.32
Zm00001d016034_P002	Maize	nucleus	67.28	54.14
EES06634	Sorghum	nucleus	67.55	53.89
Zm00001d000168_P001	Maize	plastid	67.55	53.67
KXG27036	Sorghum	cytosol	25.59	53.59
PGSC0003DMT400047585	Potato	nucleus	62.01	52.46
Solyc08g005420.2.1	Tomato	nucleus	61.74	52.23
TraesCS2B01G461400.1	Wheat	nucleus	65.44	50.72
TraesCS2D01G438800.1	Wheat	nucleus	64.91	50.51
TraesCS2A01G440000.2	Wheat	nucleus	65.17	50.41
Os04t0599800-01	Rice	nucleus	65.96	49.6
TraesCS5D01G193100.1	Wheat	mitochondrion, nucleus	60.42	48.11
TraesCS5B01G185900.1	Wheat	mitochondrion, nucleus	60.42	48.11
TraesCS5A01G197800.2	Wheat	mitochondrion, plastid	60.42	48.11
Bra011430.1-P	Field mustard	cytosol	88.13	46.71
HORVU5Hr1G074370.15	Barley	endoplasmic reticulum, vacuole	57.52	45.89
Os09t0242300-00	Rice	plastid	57.52	45.61
TraesCS6A01G085400.1	Wheat	nucleus	45.65	45.29
GSMUA_Achr3P21370_001	Banana	cytosol	47.23	45.09
GSMUA_AchrUn_...	Banana	cytosol	42.74	44.51
KRH07005	Soybean	nucleus	14.51	44.35
HORVU6Hr1G068080.3	Barley	plastid	62.01	44.09
GSMUA_AchrUn_...	Banana	cytosol	27.7	43.93
GSMUA_Achr1P25940_001	Banana	cytosol	34.04	43.43
GSMUA_AchrUn_...	Banana	nucleus	46.44	42.82
HORVU5Hr1G041780.3	Barley	plastid	60.16	42.14
GSMUA_Achr1P28050_001	Banana	cytosol	44.59	41.52
GSMUA_AchrUn_...	Banana	cytosol	31.66	39.34
Zm00001d005562_P001	Maize	plastid	18.73	34.3
Bra000756.1-P	Field mustard	nucleus	39.31	31.7
Bra013655.1-P	Field mustard	nucleus, plastid	39.31	31.63
Zm00001d017725_P001	Maize	mitochondrion	26.12	31.63
Bra019347.1-P	Field mustard	nucleus, plastid	39.05	31.49
Bra029426.1-P	Field mustard	nucleus	39.05	31.16
Bra006219.1-P	Field mustard	plastid	39.58	30.86
GSMUA_AchrUn_...	Banana	cytosol	22.69	30.07
TraesCS2D01G118700.1	Wheat	cytosol	14.78	26.67
Zm00001d009154_P001	Maize	extracellular, plasma membrane, plastid	8.18	21.23
Zm00001d006622_P001	Maize	golgi	14.51	16.27
TraesCS2D01G438900.1	Wheat	mitochondrion	0.53	0.49
TraesCS2B01G461500.1	Wheat	mitochondrion	0.53	0.49

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.1	InterPro:Apc4_WD40_dom	EnsemblPlantsGene:Bra034555	EnsemblPlants:Bra034555.1	EnsemblPlants:Bra034555.1-P
InterPro:Cdc20/Fizzy	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0010997	GO:GO:0019538	GO:GO:0030234	GO:GO:0097027
GO:GO:1904668	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	UniProt:M4F0G1	PFAM:PF00400
PFAM:PF12894	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19918	PANTHER:PTHR19918:SF30
SMART:SM00320	SUPFAM:SSF50978	UniParc:UPI000254693E	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS
InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	:	:	:	:

Description

AT4G33270 (E=7e-101) CDC20.1 | CDC20.1; signal transducer

Coordinates

chrA08:+:12848412..12849923

Molecular Weight (calculated)

41668.4 Da

IEP (calculated)

6.341

GRAVY (calculated)

-0.480

Length

379 amino acids

Sequence
(BLAST)

001: MDFDYAHYAL TEGRNGKDQE ETAVSSPSRE AYRKQLAETM NLNHTRILAF RNKPQAPAQL LPTDHSASSP LHQQQPKSSG MTLDAPDIVD DFYLNLLDWG
101: SAHVLALALG DTVYLWDASS GSTSELVTID EEKGPVTSIN WAPDGRHVAL GLNNSEVQLW DSASNRQLRT LKGCHKSRIL GMEQSYSDDW GNRWADCSGQ
201: QIASGGNDNV VHVWDRSVAS SNSTTQWLHR LEEHTSAVKA LAWCPFQANL LATGGGGGDR TIKFWNTHTG ACLNSVDTGS QVCSLLWSKN ERELLSSHGF
301: VQNQLTLWKY PSMVKMAELT GHTSRVLYMA QSPDGCTVAS AAGDETLRFW NVFGVPETAS KKPAPKAAHE PFSHVNSIR

Best Arabidopsis Sequence Match ( AT4G33270.1 )
(BLAST)

001: MDAGMNNTSS HYKTQARCPL QEHFLPRKPS KENLDRFIPN RSAMNFDYAH FALTEGRKGK DQTAAVSSPS KEAYRKQLAE TMNLNHTRIL AFRNKPQAPV
101: ELLPSNHSAS LHQQPKSVKP RRYIPQTSER TLDAPDIVDD FYLNLLDWGS ANVLAIALDH TVYLWDASTG STSELVTIDE EKGPVTSINW APDGRHVAVG
201: LNNSEVQLWD SASNRQLRTL KGGHQSRVGS LAWNNHILTT GGMDGLIINN DVRIRSPIVE TYRGHTQEVC GLKWSGSGQQ LASGGNDNVV HIWDRSVASS
301: NSTTQWLHRL EEHTSAVKAL AWCPFQANLL ATGGGGGDRT IKFWNTHTGA CLNSVDTGSQ VCSLLWSKNE RELLSSHGFT QNQLTLWKYP SMVKMAELTG
401: HTSRVLYMAQ SPDGCTVASA AGDETLRFWN VFGVPETAKK AAPKAVSEPF SHVNRIR

Arabidopsis Description

CDC20-1Cell division cycle 20.1, cofactor of APC complex [Source:UniProtKB/Swiss-Prot;Acc:Q9SZA4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.