Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 6
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G438900.1 | Wheat | mitochondrion | 99.02 | 99.26 |
| CDX98239 | Canola | nucleus | 0.49 | 1.49 |
| KRH08491 | Soybean | cytosol | 0.49 | 1.43 |
| AT5G26900.1 | Thale cress | nucleus | 1.22 | 1.13 |
| AT4G33260.1 | Thale cress | nucleus | 1.22 | 1.12 |
| Solyc08g005420.2.1 | Tomato | nucleus | 1.22 | 1.12 |
| PGSC0003DMT400047585 | Potato | nucleus | 1.22 | 1.12 |
| VIT_15s0107g00320.t01 | Wine grape | nucleus | 1.22 | 1.11 |
| VIT_16s0039g02510.t01 | Wine grape | nucleus | 1.22 | 1.11 |
| Solyc03g096870.2.1 | Tomato | nucleus | 1.22 | 1.1 |
| PGSC0003DMT400001467 | Potato | nucleus | 1.22 | 1.1 |
| Solyc06g072830.2.1 | Tomato | nucleus, plastid | 1.22 | 1.1 |
| PGSC0003DMT400069533 | Potato | nucleus, plastid | 1.22 | 1.1 |
| AT4G33270.1 | Thale cress | nucleus | 1.22 | 1.09 |
| TraesCS5B01G272800.1 | Wheat | plastid | 1.22 | 1.07 |
| TraesCS6B01G296200.1 | Wheat | plastid | 1.22 | 1.05 |
| TraesCS5B01G185900.1 | Wheat | mitochondrion, nucleus | 1.22 | 1.05 |
| TraesCS2D01G438800.1 | Wheat | nucleus | 1.22 | 1.03 |
| TraesCS2B01G461400.1 | Wheat | nucleus | 1.22 | 1.02 |
| Os04t0599800-01 | Rice | nucleus | 1.22 | 0.99 |
| Bra008327.1-P | Field mustard | cytosol, mitochondrion | 0.98 | 0.93 |
| Bra005544.1-P | Field mustard | nucleus | 0.98 | 0.91 |
| AT5G27080.1 | Thale cress | nucleus | 0.98 | 0.9 |
| AT5G27570.1 | Thale cress | nucleus | 0.98 | 0.89 |
| TraesCS4B01G346200.2 | Wheat | nucleus, plastid | 0.98 | 0.78 |
| Bra037011.1-P | Field mustard | nucleus | 0.73 | 0.72 |
| TraesCS1B01G166800.1 | Wheat | cytosol | 0.73 | 0.71 |
| AT5G27945.1 | Thale cress | cytosol, plastid, vacuole | 0.73 | 0.7 |
| Bra011430.1-P | Field mustard | cytosol | 1.22 | 0.7 |
| TraesCS3B01G595600.1 | Wheat | plastid | 0.73 | 0.62 |
| TraesCS2A01G440000.2 | Wheat | nucleus | 0.73 | 0.61 |
| Bra034555.1-P | Field mustard | nucleus | 0.49 | 0.53 |
| TraesCS7B01G353500.1 | Wheat | plastid | 0.49 | 0.49 |
| VIT_05s0029g01120.t01 | Wine grape | nucleus | 0.49 | 0.48 |
| VIT_05s0102g00550.t01 | Wine grape | nucleus | 0.49 | 0.48 |
| VIT_05s0102g00640.t01 | Wine grape | nucleus | 0.49 | 0.48 |
| VIT_05s0102g00680.t01 | Wine grape | nucleus | 0.49 | 0.48 |
| VIT_16s0039g02620.t01 | Wine grape | cytosol | 0.24 | 0.43 |
| GSMUA_Achr2P19120_001 | Banana | cytosol | 0.24 | 0.37 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G461500.1 | EnsemblPlantsGene:TraesCS2B01G461500 | Gene3D:3.30.1220.10 | Gene3D:3.40.50.300 | InterPro:Cbl_biosynth_CobW-like_C | InterPro:CobW-likC_sf |
| InterPro:CobW/HypB/UreG_dom | InterPro:IPR036627 | InterPro:P-loop_NTPase | PANTHER:PTHR13748 | PANTHER:PTHR13748:SF40 | PFAM:PF02492 |
| PFAM:PF07683 | SEG:seg | SMART:SM00833 | SUPFAM:SSF52540 | SUPFAM:SSF90002 | MapMan:15.6.1.2.3.7 |
Description
No Description!
Coordinates
chr2B:-:655014411..655017155
Molecular Weight (calculated)
44770.9 Da
IEP (calculated)
6.324
GRAVY (calculated)
-0.075
Length
409 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAAAAAARL LLPRATRAAA SSSALLHRPL DSFSRCFRSL GPPLPRPPPT VFQRHLSDAA FDAQALDNRV PATVITGFLG SGKTTLLNHI LTSQHGKRIA
101: VIENEFGEVD IDSSLVANHS SVAEDIVMVN NGCLCCTVRG DLVKMLLKLV KQKGDKFDHI VIETTGLAKP GPVIETFCSD ELVSKYVKLD GVVTLVDCKH
201: AMQHLNEVKA RWVVNEAVEQ VAYADRIILN KTDLVDDAEL EVLTNKIKLI NGMAQMKKAK FGDVDMDFVL GIGGYDLDRI EAAVQLNENK ETGGHCHLGH
301: EHGHHHDHVH DAAVTSVSIV SEGLLDLDEV NDWLERLVDE KGEDLYRLKG VISVNESTGR FVFQGVHSML EGCPAKPWED GEKRISKLVF IGRNLDEAAL
401: RKAFKGCLL
101: VIENEFGEVD IDSSLVANHS SVAEDIVMVN NGCLCCTVRG DLVKMLLKLV KQKGDKFDHI VIETTGLAKP GPVIETFCSD ELVSKYVKLD GVVTLVDCKH
201: AMQHLNEVKA RWVVNEAVEQ VAYADRIILN KTDLVDDAEL EVLTNKIKLI NGMAQMKKAK FGDVDMDFVL GIGGYDLDRI EAAVQLNENK ETGGHCHLGH
301: EHGHHHDHVH DAAVTSVSIV SEGLLDLDEV NDWLERLVDE KGEDLYRLKG VISVNESTGR FVFQGVHSML EGCPAKPWED GEKRISKLVF IGRNLDEAAL
401: RKAFKGCLL
001: MATLLKLDIA TTFLAFIVPR ANTSLNHRFA SARLSTATVS LRTKSSSFYS AALYSDSRRR FHSAVASDSS LAVVDDEDIF DVASEILPDN RIPATIITGF
101: LGSGKTTLLN HILTGDHGKR IAVIENEFGE VDIDGSLVAA QTAGAEDIMM LNNGCLCCTV RGDLVRMISE MVQTKKGRFD HIVIETTGLA NPAPIIQTFY
201: AEDEIFNDVK LDGVVTLVDA KHARLHLDEV KPEGYVNEAV EQIAYADRII VNKTDLVGEP ELASVMQRIK TINSMAHMKR TKYGKVDLDY VLGIGGFDLE
301: RIESSVNEEE KEDREGHDDH HHGHDCHDHH NEHEHEHEHE HHHSHDHTHD PGVGSVSIVC EGDLDLEKAN MWLGALLYQR SEDIYRMKGI LSVQDMDERF
401: VFQGVHEIFE GSPDRLWRKD ETRTNKIVFI GKNLNREELE MGFRACLI
101: LGSGKTTLLN HILTGDHGKR IAVIENEFGE VDIDGSLVAA QTAGAEDIMM LNNGCLCCTV RGDLVRMISE MVQTKKGRFD HIVIETTGLA NPAPIIQTFY
201: AEDEIFNDVK LDGVVTLVDA KHARLHLDEV KPEGYVNEAV EQIAYADRII VNKTDLVGEP ELASVMQRIK TINSMAHMKR TKYGKVDLDY VLGIGGFDLE
301: RIESSVNEEE KEDREGHDDH HHGHDCHDHH NEHEHEHEHE HHHSHDHTHD PGVGSVSIVC EGDLDLEKAN MWLGALLYQR SEDIYRMKGI LSVQDMDERF
401: VFQGVHEIFE GSPDRLWRKD ETRTNKIVFI GKNLNREELE MGFRACLI
Arabidopsis Description
At1g15730/F7H2_7 [Source:UniProtKB/TrEMBL;Acc:Q9LMR1]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.