CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG27036	Sorghum	cytosol	24.63	18.23
CDX75343	Canola	nucleus	43.28	15.55
CDY13491	Canola	cytosol	42.54	15.49
CDY59110	Canola	nucleus	47.76	15.27
CDY59109	Canola	nucleus	47.76	15.27
CDY52543	Canola	nucleus	47.76	14.95
KRH08491	Soybean	cytosol	14.93	14.29
CDX68960	Canola	nucleus	43.28	14.04
KXG30937	Sorghum	nucleus	45.52	12.95
TraesCS6A01G268900.1	Wheat	plastid	45.52	12.87
TraesCS6B01G296200.1	Wheat	plastid	45.52	12.87
TraesCS5A01G272600.1	Wheat	plastid	44.78	12.85
EES06634	Sorghum	nucleus	45.52	12.84
TraesCS6D01G246000.1	Wheat	plastid	45.52	12.84
TraesCS5D01G280600.1	Wheat	plastid	44.78	12.82
TraesCS5B01G272800.1	Wheat	plastid	44.78	12.82
Zm00001d016034_P002	Maize	nucleus	44.78	12.74
Zm00001d000168_P001	Maize	plastid	44.03	12.37
Os02t0700100-01	Rice	extracellular	43.28	12.37
Os09t0242300-00	Rice	plastid	44.03	12.34
TraesCS6A01G085400.1	Wheat	nucleus	34.33	12.04
GSMUA_Achr11P...	Banana	plastid	42.54	12.03
TraesCS2D01G438800.1	Wheat	nucleus	43.28	11.91
TraesCS2B01G461400.1	Wheat	nucleus	43.28	11.86
GSMUA_Achr8P14580_001	Banana	nucleus, plastid	42.54	11.85
GSMUA_Achr5P18020_001	Banana	nucleus, plastid	41.79	11.84
TraesCS2A01G440000.2	Wheat	nucleus	43.28	11.84
TraesCS5B01G185900.1	Wheat	mitochondrion, nucleus	41.79	11.76
TraesCS5A01G197800.2	Wheat	mitochondrion, plastid	41.04	11.55
TraesCS5D01G193100.1	Wheat	mitochondrion, nucleus	41.04	11.55
HORVU5Hr1G074370.15	Barley	endoplasmic reticulum, vacuole	40.3	11.37
Os04t0599800-01	Rice	nucleus	42.54	11.31
Zm00001d005562_P001	Maize	plastid	17.16	11.11
HORVU6Hr1G068080.3	Barley	plastid	43.28	10.88
HORVU5Hr1G041780.3	Barley	plastid	40.3	9.98
CDY46124	Canola	cytosol	43.28	9.35
CDY44519	Canola	cytosol, nucleus	35.82	9.25
CDX70523	Canola	plastid	29.1	8.33
CDX78541	Canola	plastid	29.1	8.33
CDY71640	Canola	nucleus, plastid	14.18	7.92
CDY28289	Canola	cytosol, extracellular, mitochondrion, plastid	11.19	7.77
CDY51550	Canola	nucleus	26.12	7.71
CDY10820	Canola	nucleus, plastid	26.87	7.66
CDY41283	Canola	nucleus, plastid	26.87	7.64
CDX94473	Canola	nucleus	26.87	7.63
CDX94136	Canola	nucleus, plastid	21.64	7.59
CDX86737	Canola	nucleus	26.87	7.58
CDX90811	Canola	nucleus	25.37	7.51
CDY59111	Canola	nucleus	11.94	7.41
CDY71065	Canola	cytosol	5.22	6.8
GSMUA_Achr2P19120_001	Banana	cytosol	13.43	6.74
TraesCS2D01G118700.1	Wheat	cytosol	10.45	6.67
Zm00001d017725_P001	Maize	mitochondrion	14.93	6.39
CDY71694	Canola	nucleus	7.46	5.78
OQU82251	Sorghum	cytosol	7.46	5.71
CDY04804	Canola	mitochondrion, plastid	6.72	5.62
Zm00001d006622_P001	Maize	golgi	11.94	4.73
Zm00001d009154_P001	Maize	extracellular, plasma membrane, plastid	4.48	4.11
CDY26774	Canola	mitochondrion	2.99	3.64
CDY28290	Canola	cytosol, mitochondrion, nucleus	3.73	3.42
TraesCS2D01G438900.1	Wheat	mitochondrion	1.49	0.49
TraesCS2B01G461500.1	Wheat	mitochondrion	1.49	0.49
CDX75342	Canola	cytosol	0.0	0.0

Protein Annotations

Gene3D:2.130.10.10	MapMan:35.2	EnsemblPlants:CDX98239	ProteinID:CDX98239	ProteinID:CDX98239.1	InterPro:Cdc20/Fizzy
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0010997	GO:GO:0019538	GO:GO:0030234	GO:GO:0051488	GO:GO:0097027
GO:GO:1904668	EnsemblPlantsGene:GSBRNA2T00105740001	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	ScanProsite:PS00678
PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19918	PANTHER:PTHR19918:SF30	SMART:SM00320	SUPFAM:SSF50978
UniParc:UPI0004EE5B2C	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
SEG:seg	:	:	:	:	:

Description

BnaC07g08590D

Coordinates

chrLK031903:-:1251655..1252285

Molecular Weight (calculated)

15018.9 Da

IEP (calculated)

9.841

GRAVY (calculated)

-0.606

Length

134 amino acids

Sequence
(BLAST)

001: MSSPKPPAAK KQKKRRHCPG PHSLPLGCSV SELVTIEEAK GPITSIIWSP DASYLALGLN NSQVQLWDSS SNTKIKTFKG RITCVEQQHP PHNWRHGRQD
101: CQLRCQDQAC CGDLQRSLWR GLWAQVVSFW KAAS

Best Arabidopsis Sequence Match ( AT4G33270.1 )
(BLAST)

001: MDAGMNNTSS HYKTQARCPL QEHFLPRKPS KENLDRFIPN RSAMNFDYAH FALTEGRKGK DQTAAVSSPS KEAYRKQLAE TMNLNHTRIL AFRNKPQAPV
101: ELLPSNHSAS LHQQPKSVKP RRYIPQTSER TLDAPDIVDD FYLNLLDWGS ANVLAIALDH TVYLWDASTG STSELVTIDE EKGPVTSINW APDGRHVAVG
201: LNNSEVQLWD SASNRQLRTL KGGHQSRVGS LAWNNHILTT GGMDGLIINN DVRIRSPIVE TYRGHTQEVC GLKWSGSGQQ LASGGNDNVV HIWDRSVASS
301: NSTTQWLHRL EEHTSAVKAL AWCPFQANLL ATGGGGGDRT IKFWNTHTGA CLNSVDTGSQ VCSLLWSKNE RELLSSHGFT QNQLTLWKYP SMVKMAELTG
401: HTSRVLYMAQ SPDGCTVASA AGDETLRFWN VFGVPETAKK AAPKAVSEPF SHVNRIR

Arabidopsis Description

CDC20-1Cell division cycle 20.1, cofactor of APC complex [Source:UniProtKB/Swiss-Prot;Acc:Q9SZA4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.