Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- cytosol 1
- plastid 2
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G438800.1 | Wheat | nucleus | 95.91 | 96.3 |
| TraesCS2A01G440000.2 | Wheat | nucleus | 89.57 | 89.39 |
| TraesCS5B01G272800.1 | Wheat | plastid | 77.3 | 80.77 |
| TraesCS6B01G296200.1 | Wheat | plastid | 77.91 | 80.38 |
| Os04t0599800-01 | Rice | nucleus | 78.94 | 76.59 |
| VIT_15s0107g00320.t01 | Wine grape | nucleus | 66.26 | 72.0 |
| Solyc03g096870.2.1 | Tomato | nucleus | 66.05 | 71.3 |
| PGSC0003DMT400001467 | Potato | nucleus | 66.05 | 71.3 |
| PGSC0003DMT400069533 | Potato | nucleus, plastid | 66.05 | 70.99 |
| Solyc06g072830.2.1 | Tomato | nucleus, plastid | 65.64 | 70.55 |
| AT4G33260.1 | Thale cress | nucleus | 64.01 | 70.02 |
| TraesCS5B01G185900.1 | Wheat | mitochondrion, nucleus | 67.28 | 69.12 |
| AT4G33270.1 | Thale cress | nucleus | 64.42 | 68.93 |
| VIT_05s0029g01120.t01 | Wine grape | nucleus | 57.87 | 68.52 |
| VIT_05s0102g00550.t01 | Wine grape | nucleus | 57.87 | 68.52 |
| VIT_05s0102g00640.t01 | Wine grape | nucleus | 57.87 | 68.52 |
| Bra037011.1-P | Field mustard | nucleus | 58.69 | 68.5 |
| VIT_05s0102g00680.t01 | Wine grape | nucleus | 57.87 | 68.19 |
| VIT_16s0039g02510.t01 | Wine grape | nucleus | 61.55 | 66.74 |
| Bra005544.1-P | Field mustard | nucleus | 59.51 | 66.29 |
| Bra034555.1-P | Field mustard | nucleus | 50.72 | 65.44 |
| AT5G27080.1 | Thale cress | nucleus | 59.1 | 65.38 |
| AT5G27570.1 | Thale cress | nucleus | 59.92 | 65.11 |
| AT5G26900.1 | Thale cress | nucleus | 59.1 | 65.09 |
| PGSC0003DMT400047585 | Potato | nucleus | 59.3 | 64.73 |
| Solyc08g005420.2.1 | Tomato | nucleus | 59.1 | 64.51 |
| Bra008327.1-P | Field mustard | cytosol, mitochondrion | 53.17 | 60.75 |
| AT5G27945.1 | Thale cress | cytosol, plastid, vacuole | 47.85 | 54.67 |
| VIT_16s0039g02620.t01 | Wine grape | cytosol | 24.74 | 52.16 |
| KRH08491 | Soybean | cytosol | 14.93 | 52.14 |
| Bra011430.1-P | Field mustard | cytosol | 65.03 | 44.48 |
| CDX98239 | Canola | nucleus | 11.86 | 43.28 |
| TraesCS3B01G595600.1 | Wheat | plastid | 38.04 | 38.35 |
| TraesCS4B01G346200.2 | Wheat | nucleus, plastid | 39.47 | 37.62 |
| TraesCS7B01G353500.1 | Wheat | plastid | 30.27 | 36.54 |
| TraesCS1B01G166800.1 | Wheat | cytosol | 31.49 | 36.41 |
| GSMUA_Achr2P19120_001 | Banana | cytosol | 16.16 | 29.59 |
| TraesCS2D01G438900.1 | Wheat | mitochondrion | 1.02 | 1.23 |
| TraesCS2B01G461500.1 | Wheat | mitochondrion | 1.02 | 1.22 |
Protein Annotations
| MapMan:13.3.4.1.4 | Gene3D:2.130.10.10 | InterPro:Apc4_WD40_dom | InterPro:Cdc20/Fizzy | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010997 |
| GO:GO:0019538 | GO:GO:0030234 | GO:GO:0097027 | GO:GO:1904668 | InterPro:IPR001680 | InterPro:IPR015943 |
| InterPro:IPR017986 | PFAM:PF00400 | PFAM:PF12894 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 |
| PANTHER:PTHR19918 | PANTHER:PTHR19918:SF30 | InterPro:Quinoprotein_ADH-like_supfam | SMART:SM00320 | SUPFAM:SSF50998 | EnsemblPlantsGene:TraesCS2B01G461400 |
| EnsemblPlants:TraesCS2B01G461400.1 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | TIGR:cd00200 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:655010124..655012010
Molecular Weight (calculated)
53909.6 Da
IEP (calculated)
8.705
GRAVY (calculated)
-0.500
Length
489 amino acids
Sequence
(BLAST)
(BLAST)
001: MDAGSDMMSP EKSGRRGARP PLREAGSIST PSMPPLQEPG SRPRPYMPSL CSTPRNPAVK CYGDRFIPDR SAMDMDMAHY LLTEPRKDRK NAVTPSPGKE
101: AYRKLLAEKL LNNRTRILAF RNRPPEPENS ILTELRADVA SVQARPAKKR RYIPQSAERT LDAPDLLDDY YLNLLDWGSA NVLSIALGNT VYLWDAASGS
201: TSELVTIDED DGPVTSVSWA PDGQHIAIGL NSSAVQIWDS SSNRLLRTLQ GVHESRVGSL SWNKSILTAG GMDGKIVNND VRIREHAVQT YRGHTQEVCG
301: LKWSGSGRQL ASGGNDNLLH IWDVSMASSA QSAGRTQWLH RMEDHSAAVK ALAWCPFQSN LLASGGGAND RCIKFWNTHT GACLNSVDTG SQVCALLWNK
401: NDRELLSSHG FTQNQLTLWK YPSMVKMAEL NGHTSRVLFM AQSPDGCTVA SAAADETLRF WNVFPDAPKS AVKEKTSQSR LFNSYNHLR
101: AYRKLLAEKL LNNRTRILAF RNRPPEPENS ILTELRADVA SVQARPAKKR RYIPQSAERT LDAPDLLDDY YLNLLDWGSA NVLSIALGNT VYLWDAASGS
201: TSELVTIDED DGPVTSVSWA PDGQHIAIGL NSSAVQIWDS SSNRLLRTLQ GVHESRVGSL SWNKSILTAG GMDGKIVNND VRIREHAVQT YRGHTQEVCG
301: LKWSGSGRQL ASGGNDNLLH IWDVSMASSA QSAGRTQWLH RMEDHSAAVK ALAWCPFQSN LLASGGGAND RCIKFWNTHT GACLNSVDTG SQVCALLWNK
401: NDRELLSSHG FTQNQLTLWK YPSMVKMAEL NGHTSRVLFM AQSPDGCTVA SAAADETLRF WNVFPDAPKS AVKEKTSQSR LFNSYNHLR
001: MDAGLNRCPL QEHFLPRKNS KENLDRFIPN RSAMNFDYAH FALTEERKGK DQSATVSSPS KEAYRKQLAE TMNLNHTRIL AFRNKPQAPV ELLPSNHSAS
101: LHQQPKSVKP RRYIPQTSER TLDAPDIVDD FYLNLLDWGS ANVLAIALDH TVYLWDASTG STSELVTIDE EKGPVTSINW APDGRHVAVG LNNSEVQLWD
201: SASNRQLRTL KGGHQSRVGS LAWNNHILTT GGMDGLIINN DVRIRSPIVE TYRGHTQEVC GLKWSGSGQQ LASGGNDNVV HIWDRSVASS NSTTQWLHRL
301: EEHTSAVKAL AWCPFQANLL ATGGGGGDRT IKFWNTHTGA CLNSVDTGSQ VCSLLWSKNE RELLSSHGFT QNQLTLWKYP SMVKMAELTG HTSRVLYMAQ
401: SPDGCTVASA AGDETLRFWN VFGVPETAKK AAPKAVAEPF SHVNRIR
101: LHQQPKSVKP RRYIPQTSER TLDAPDIVDD FYLNLLDWGS ANVLAIALDH TVYLWDASTG STSELVTIDE EKGPVTSINW APDGRHVAVG LNNSEVQLWD
201: SASNRQLRTL KGGHQSRVGS LAWNNHILTT GGMDGLIINN DVRIRSPIVE TYRGHTQEVC GLKWSGSGQQ LASGGNDNVV HIWDRSVASS NSTTQWLHRL
301: EEHTSAVKAL AWCPFQANLL ATGGGGGDRT IKFWNTHTGA CLNSVDTGSQ VCSLLWSKNE RELLSSHGFT QNQLTLWKYP SMVKMAELTG HTSRVLYMAQ
401: SPDGCTVASA AGDETLRFWN VFGVPETAKK AAPKAVAEPF SHVNRIR
Arabidopsis Description
CDC20-2Cell division cycle 20.2, cofactor of APC complex [Source:UniProtKB/Swiss-Prot;Acc:Q9S7I8]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.