Subcellular Localization
min:
: max
Winner_takes_all: plastid, nucleus
Predictor Summary:
Predictor Summary:
- plastid 4
- cytosol 1
- nucleus 2
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU4Hr1G084710.1 | Barley | cytosol, mitochondrion | 92.4 | 84.19 |
| Zm00001d027430_P001 | Maize | plastid | 81.87 | 81.71 |
| Zm00001d048472_P001 | Maize | nucleus, plastid | 82.26 | 81.15 |
| Os03t0123300-01 | Rice | plastid | 82.26 | 80.69 |
| TraesCS1B01G166800.1 | Wheat | cytosol | 66.47 | 80.61 |
| TraesCS7B01G353500.1 | Wheat | plastid | 63.55 | 80.49 |
| VIT_02s0025g04680.t01 | Wine grape | cytosol, nucleus, plastid | 64.13 | 72.79 |
| KRH57275 | Soybean | nucleus | 65.11 | 72.77 |
| GSMUA_Achr11P... | Banana | plastid | 68.23 | 72.02 |
| Bra019347.1-P | Field mustard | nucleus, plastid | 64.33 | 70.21 |
| CDY10820 | Canola | nucleus, plastid | 63.94 | 69.79 |
| CDY41283 | Canola | nucleus, plastid | 63.94 | 69.64 |
| Bra013655.1-P | Field mustard | nucleus, plastid | 63.94 | 69.64 |
| AT4G22910.1 | Thale cress | nucleus, plastid | 64.91 | 68.94 |
| CDX94473 | Canola | nucleus | 63.35 | 68.86 |
| PGSC0003DMT400058525 | Potato | nucleus, plastid | 64.13 | 68.83 |
| AT4G11920.1 | Thale cress | nucleus | 63.16 | 68.21 |
| Solyc08g080080.2.1 | Tomato | nucleus, plastid | 63.94 | 68.19 |
| KRH77460 | Soybean | nucleus, plastid | 60.82 | 67.97 |
| Bra029426.1-P | Field mustard | nucleus | 62.77 | 67.79 |
| CDX86737 | Canola | nucleus | 62.77 | 67.79 |
| Bra000756.1-P | Field mustard | nucleus | 61.6 | 67.23 |
| CDY51550 | Canola | nucleus | 58.87 | 66.52 |
| GSMUA_Achr11P... | Banana | plastid | 63.55 | 66.4 |
| CDX90811 | Canola | nucleus | 58.48 | 66.23 |
| Solyc12g056490.1.1 | Tomato | nucleus, plastid | 61.99 | 66.11 |
| PGSC0003DMT400027994 | Potato | nucleus, plastid | 61.6 | 65.02 |
| CDX94136 | Canola | nucleus, plastid | 48.34 | 64.92 |
| KRH04001 | Soybean | mitochondrion | 65.3 | 63.69 |
| OQU93351 | Sorghum | nucleus | 83.63 | 61.64 |
| TraesCS3B01G595600.1 | Wheat | plastid | 56.53 | 59.79 |
| KRH27985 | Soybean | nucleus, plastid | 52.44 | 59.25 |
| CDY71640 | Canola | nucleus, plastid | 23.78 | 50.83 |
| TraesCS2B01G461400.1 | Wheat | nucleus | 37.62 | 39.47 |
| TraesCS5B01G272800.1 | Wheat | plastid | 35.48 | 38.89 |
| TraesCS6B01G296200.1 | Wheat | plastid | 35.67 | 38.61 |
| TraesCS5B01G185900.1 | Wheat | mitochondrion, nucleus | 34.89 | 37.6 |
| TraesCS2B01G461500.1 | Wheat | mitochondrion | 0.78 | 0.98 |
Protein Annotations
| MapMan:13.3.4.1.3 | Gene3D:2.130.10.10 | InterPro:Apc4_WD40_dom | InterPro:Cdc20/Fizzy | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010997 |
| GO:GO:0019538 | GO:GO:0030234 | GO:GO:0097027 | GO:GO:1904668 | InterPro:IPR001680 | InterPro:IPR015943 |
| InterPro:IPR017986 | PFAM:PF00400 | PFAM:PF12894 | ScanProsite:PS00678 | PFscan:PS50082 | PFscan:PS50294 |
| PANTHER:PTHR19918 | PANTHER:PTHR19918:SF31 | SMART:SM00320 | SUPFAM:SSF50978 | EnsemblPlantsGene:TraesCS4B01G346200 | EnsemblPlants:TraesCS4B01G346200.2 |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_CS | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | TIGR:cd00200 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr4B:-:640007418..640010973
Molecular Weight (calculated)
54728.0 Da
IEP (calculated)
9.452
GRAVY (calculated)
-0.349
Length
513 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHHQQGQGQ PPSPADANSK PPTPSSTPAS RHGSGTAPSW MSSSEGAPPR GPASSSASSA PPTPASRTVY SDRFIPSRTG SNLALFDLAP APSSSGSAAA
101: AAPPSPYCAL LRAALFGPDA PDRLASSAGA SSSSSAASPV GSPAGGNIFR FKAEVPRNAK RALFAGGDDQ DLLFPGIFTP KGSGPRKIPR SPYKVLDAPA
201: LQDDFYLNLV DWSSHNVLSV GLGNCVYLWN ACSSKVTKLC DLGADDTVCS VSWAQRGTHL AVGTNQGTVQ IWDATRCKRM RTMESHRMRV GALAWNSSLL
301: SSGSRDKNIL HHDLRAPEDY VSKLTGHKSE VCGLKWSYDN RQLASGGNDN KLFVWNQHSV QPVLKYTEHT AAVKAIAWSP HLHGLLASGG GTADRCIRFW
401: NTTTNTHLSS MDTGSQVCNL VWSKNVNELV STHGYSQNQI IVWRYPTMSK LATLTGHTFR VLYLAISPDG QTIVTGAGDE TLRFWNVFPS PKSQSSDSLS
501: SIGATSFVRS YIR
101: AAPPSPYCAL LRAALFGPDA PDRLASSAGA SSSSSAASPV GSPAGGNIFR FKAEVPRNAK RALFAGGDDQ DLLFPGIFTP KGSGPRKIPR SPYKVLDAPA
201: LQDDFYLNLV DWSSHNVLSV GLGNCVYLWN ACSSKVTKLC DLGADDTVCS VSWAQRGTHL AVGTNQGTVQ IWDATRCKRM RTMESHRMRV GALAWNSSLL
301: SSGSRDKNIL HHDLRAPEDY VSKLTGHKSE VCGLKWSYDN RQLASGGNDN KLFVWNQHSV QPVLKYTEHT AAVKAIAWSP HLHGLLASGG GTADRCIRFW
401: NTTTNTHLSS MDTGSQVCNL VWSKNVNELV STHGYSQNQI IVWRYPTMSK LATLTGHTFR VLYLAISPDG QTIVTGAGDE TLRFWNVFPS PKSQSSDSLS
501: SIGATSFVRS YIR
001: MEEEDPTASN VITNSNSSSM RNLSPAMNTP VVSLESRINR LINANQSQSP SPSSLSRSIY SDRFIPSRSG SNFALFDLSP SPSKDGKEDG AGSYATLLRA
101: AMFGPETPEK RDITGFSSSR NIFRFKTETH RSLNSFSPFG VDDDSPGVSH SGPVKAPRKV PRSPYKVLDA PALQDDFYLN LVDWSAQNVL AVGLGNCVYL
201: WNACSSKVTK LCDLGAEDSV CSVGWALRGT HLAVGTSTGK VQIWDASRCK RTRTMEGHRL RVGALAWGSS VLSSGSRDKS ILQRDIRCQE DHVSKLAGHK
301: SEVCGLKWSY DNRELASGGN DNRLFVWNQH STQPVLKYSE HTAAVKAIAW SPHVHGLLAS GGGTADRCIR FWNTTTNTHL SSIDTCSQVC NLAWSKNVNE
401: LVSTHGYSQN QIIVWKYPTM SKIATLTGHT YRVLYLAVSP DGQTIVTGAG DETLRFWNVF PSPKSQNTDS EIGSSFFGRT TIR
101: AMFGPETPEK RDITGFSSSR NIFRFKTETH RSLNSFSPFG VDDDSPGVSH SGPVKAPRKV PRSPYKVLDA PALQDDFYLN LVDWSAQNVL AVGLGNCVYL
201: WNACSSKVTK LCDLGAEDSV CSVGWALRGT HLAVGTSTGK VQIWDASRCK RTRTMEGHRL RVGALAWGSS VLSSGSRDKS ILQRDIRCQE DHVSKLAGHK
301: SEVCGLKWSY DNRELASGGN DNRLFVWNQH STQPVLKYSE HTAAVKAIAW SPHVHGLLAS GGGTADRCIR FWNTTTNTHL SSIDTCSQVC NLAWSKNVNE
401: LVSTHGYSQN QIIVWKYPTM SKIATLTGHT YRVLYLAVSP DGQTIVTGAG DETLRFWNVF PSPKSQNTDS EIGSSFFGRT TIR
Arabidopsis Description
FZR2FZR2 [Source:UniProtKB/TrEMBL;Acc:A0A178V5I2]
SUBAcon: [plastid,nucleus]
SUBAcon: [plastid,nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.