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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 5
  • nucleus 4
  • cytosol 1
PPI
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc08g080080.2.1 Tomato nucleus, plastid 99.16 98.54
VIT_02s0025g04680.t01 Wine grape cytosol, nucleus, plastid 78.24 82.74
KRH57275 Soybean nucleus 77.82 81.05
PGSC0003DMT400027994 Potato nucleus, plastid 81.8 80.45
KRH77460 Soybean nucleus, plastid 72.59 75.6
CDY10820 Canola nucleus, plastid 73.85 75.11
Bra013655.1-P Field mustard nucleus, plastid 73.85 74.95
CDY41283 Canola nucleus, plastid 73.85 74.95
Bra019347.1-P Field mustard nucleus, plastid 73.43 74.68
AT4G22910.1 Thale cress nucleus, plastid 75.31 74.53
GSMUA_Achr11P... Banana plastid 74.06 72.84
KRH04001 Soybean mitochondrion 78.24 71.1
CDX94136 Canola nucleus, plastid 55.86 69.9
GSMUA_Achr11P... Banana plastid 68.83 67.01
KRH27985 Soybean nucleus, plastid 63.6 66.96
Zm00001d048472_P001 Maize nucleus, plastid 72.18 66.35
Zm00001d027430_P001 Maize plastid 71.34 66.34
TraesCS4D01G341200.1 Wheat nucleus, plastid 68.83 64.26
TraesCS4B01G346200.2 Wheat nucleus, plastid 68.83 64.13
Os03t0123300-01 Rice plastid 69.46 63.48
TraesCS1B01G166800.1 Wheat cytosol 55.23 62.41
TraesCS7B01G353500.1 Wheat plastid 52.72 62.22
HORVU4Hr1G084710.1 Barley cytosol, mitochondrion 69.46 58.97
CDY71640 Canola nucleus, plastid 28.45 56.67
PGSC0003DMT400076326 Potato nucleus, plastid 59.2 56.37
OQU93351 Sorghum nucleus 72.38 49.71
PGSC0003DMT400001467 Potato nucleus 39.54 41.72
PGSC0003DMT400069533 Potato nucleus, plastid 39.12 41.1
PGSC0003DMT400047585 Potato nucleus 37.45 39.96
PGSC0003DMT400013474 Potato cytosol 31.17 31.3
Protein Annotations
EntrezGene:102598991MapMan:13.3.4.1.3Gene3D:2.130.10.10InterPro:Apc4_WD40_domInterPro:Cdc20/FizzyGO:GO:0003674
GO:GO:0005488GO:GO:0005515GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0010997GO:GO:0019538GO:GO:0030234GO:GO:0097027GO:GO:1904668InterPro:IPR001680
InterPro:IPR015943InterPro:IPR017986UniProt:M1C2T4PFAM:PF00400PFAM:PF12894EnsemblPlantsGene:PGSC0003DMG400022734
PGSC:PGSC0003DMG400022734EnsemblPlants:PGSC0003DMT400058525ScanProsite:PS00678PFscan:PS50082PFscan:PS50294PANTHER:PTHR19918
PANTHER:PTHR19918:SF31SMART:SM00320SUPFAM:SSF50978UniParc:UPI000294E877InterPro:WD40/YVTN_repeat-like_dom_sfInterPro:WD40_repeat
InterPro:WD40_repeat_CSInterPro:WD40_repeat_domInterPro:WD40_repeat_dom_sfRefSeq:XP_006358847.1SEG:seg:
Description
Cell cycle switch 52A [Source:PGSC_GENE;Acc:PGSC0003DMG400022734]
Coordinates
chr8:+:53754212..53758588
Molecular Weight (calculated)
52621.8 Da
IEP (calculated)
9.227
GRAVY (calculated)
-0.389
Length
478 amino acids
Sequence
(BLAST)
001: MENSSVNPLS SSSDLNPKTP SRTNQLIPGF NSYHPSPSRT IYSDRFIPSR SSSNFALFDL PLPPQSSSSE DSTNAYTALL RSALFGTDCG SVVPPVTPDK
101: SSGLNARNLQ ICRPNCNIFR YKTETRQSLQ SLSPFGFDDQ LPGFSPSPVK ANRKVPRSPF KVLDAPALQD DFYLNLVDWS SHNVLAVGLG SCVYLWHASS
201: SKVVKLCDLG IDDSVSSVGW AQRGTHLAVG TSNGKVQLWD SSRCKRIRTM EGHRLRVGAL AWSSSMLSSG SRDKSILQRD IRAQEDFVSK LSGHKSEVCG
301: LKWSYDNREL ASGGNDNRLF VWNNHSTQPV LKYCEHTAAV KAIAWSPHLH GLLASGGGTA DRCIRFWNTT TNTHLSCMDT GSQVCNLVWS KNVNELVSTH
401: GYSQNQIIVW RYPTMSKIAT LTGHTYRVLY LAISPDGQTI VTGAGDETLR FWNVFPSPKS KNTETEIGAS SFGRTQIR
Best Arabidopsis Sequence Match ( AT4G22910.1 )
(BLAST)
001: MEEEDPTASN VITNSNSSSM RNLSPAMNTP VVSLESRINR LINANQSQSP SPSSLSRSIY SDRFIPSRSG SNFALFDLSP SPSKDGKEDG AGSYATLLRA
101: AMFGPETPEK RDITGFSSSR NIFRFKTETH RSLNSFSPFG VDDDSPGVSH SGPVKAPRKV PRSPYKVLDA PALQDDFYLN LVDWSAQNVL AVGLGNCVYL
201: WNACSSKVTK LCDLGAEDSV CSVGWALRGT HLAVGTSTGK VQIWDASRCK RTRTMEGHRL RVGALAWGSS VLSSGSRDKS ILQRDIRCQE DHVSKLAGHK
301: SEVCGLKWSY DNRELASGGN DNRLFVWNQH STQPVLKYSE HTAAVKAIAW SPHVHGLLAS GGGTADRCIR FWNTTTNTHL SSIDTCSQVC NLAWSKNVNE
401: LVSTHGYSQN QIIVWKYPTM SKIATLTGHT YRVLYLAVSP DGQTIVTGAG DETLRFWNVF PSPKSQNTDS EIGSSFFGRT TIR
Arabidopsis Description
FZR2FZR2 [Source:UniProtKB/TrEMBL;Acc:A0A178V5I2]
SUBAcon: [plastid,nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.