Factsheet for TraesCS5A01G371800.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G381300.1	Wheat	mitochondrion	96.76	97.02
TraesCS5B01G373900.1	Wheat	mitochondrion	95.14	95.14
HORVU5Hr1G092510.5	Barley	mitochondrion	87.04	83.77
KXG37933	Sorghum	mitochondrion	74.9	72.08
Os03t0649000-01	Rice	mitochondrion	76.11	71.94
Zm00001d033510_P001	Maize	mitochondrion	73.68	71.47
Zm00001d021933_P001	Maize	cytosol	33.87	69.34
TraesCS5A01G027200.1	Wheat	mitochondrion	68.42	67.96
PGSC0003DMT400005067	Potato	cytosol	21.59	58.39
GSMUA_Achr5P02610_001	Banana	mitochondrion	54.79	57.34
GSMUA_Achr6P31090_001	Banana	mitochondrion	53.04	55.12
GSMUA_Achr2P12860_001	Banana	mitochondrion	53.71	54.97
Zm00001d032528_P001	Maize	plastid	32.66	53.78
CDY71046	Canola	cytosol	41.57	53.1
VIT_08s0032g01040.t01	Wine grape	mitochondrion, nucleus	53.04	52.4
Bra038679.1-P	Field mustard	cytosol	47.5	50.57
CDY47916	Canola	mitochondrion, nucleus	47.23	50.36
KRH72142	Soybean	mitochondrion	52.23	50.33
PGSC0003DMT400036595	Potato	nucleus, plastid	23.89	50.28
KRH68026	Soybean	mitochondrion	41.7	50.08
KRH32877	Soybean	mitochondrion	51.82	49.94
KRG96284	Soybean	mitochondrion	50.88	49.93
AT3G11760.1	Thale cress	nucleus	46.83	49.43
Solyc01g006890.2.1	Tomato	mitochondrion	51.01	49.41
PGSC0003DMT400055068	Potato	mitochondrion	50.47	48.89
GSMUA_Achr4P31330_001	Banana	mitochondrion	54.93	48.28
KRH34623	Soybean	cytosol, extracellular, nucleus	44.8	46.76
Solyc11g006410.1.1	Tomato	nucleus	47.64	46.26
PGSC0003DMT400065418	Potato	extracellular, golgi	45.88	44.5
AT2G10560.1	Thale cress	nucleus	16.19	43.17
CDX70194	Canola	extracellular, vacuole	41.57	42.9
CDX98789	Canola	endoplasmic reticulum, extracellular	41.7	41.98
Bra009421.1-P	Field mustard	endoplasmic reticulum, extracellular	41.7	41.93
AT5G04860.1	Thale cress	endoplasmic reticulum, extracellular	41.84	39.64
TraesCS3A01G105700.1	Wheat	mitochondrion	26.18	32.28
KRH07454	Soybean	endoplasmic reticulum	7.56	29.17
Solyc04g009790.2.1	Tomato	extracellular, golgi, plasma membrane	45.75	27.01
PGSC0003DMT400056835	Potato	cytosol, nucleus	13.77	24.52

Protein Annotations

EnsemblPlants:TraesCS5A01G371800.1	EnsemblPlantsGene:TraesCS5A01G371800	InterPro:IPR019448	InterPro:NT-C2	PANTHER:PTHR31182	PANTHER:PTHR31182:SF6
PFAM:PF10358	PFscan:PS51840	SEG:seg	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr5A:+:570499924..570503318

Molecular Weight (calculated)

81858.5 Da

IEP (calculated)

5.050

GRAVY (calculated)

-0.521

Length

741 amino acids

Sequence
(BLAST)

001: MVARMMRWPR PPQARKFRVR LVVRRAEGLP PPPPSVEPAE QEQRVAAEVR WKGPRASGLG SLRRAVRRNR TRGEELAGGA VAWEEGFDSA VTLAAASHRE
101: AAAFQPWELA FTVFTDVNKG PKTKPTILGT ASLSLADYAS AAEEDIEIIL PLSVPCGAPE SAPSLHLTLS MVELRAHQEA SDASQRSAVA APLSPSSCDS
201: VPGGKDEVSV IKAGLRKVKI LRHIVSARRS KKTFQSDEGS EDNCYIHSDG TEYPYGTEPV DEDLDDRTHE DEVADSTIRK SFSYGSLQSV NHVGDHEDWV
301: YYSHRKSDAG YHVDEPQSST AVGTVLPTAK RSILPWRKRK LGLRSLKAKG EPLLKRANGE EGGDDIDHDR RLLTSSDGSQ RSRSEDGSVH GMMSEFGDDN
401: FVVGNWESKE VLSRDGHMRL SSQVFFASID QRSERAAGAS ACTSLVAVIA DWFQANQNLM PIQSQFDNLI REGSLEWRNL CENKTYRERF PDKHFDLETV
501: LDAKTRPLTV SPSKSFIGFF VPEGADDMGG LDFLNDAMSF DNIWDEISQA AEASSSDNPN LYIVSWNDHF FLLKVERDAY YIIDTLGERF YEGCSQAYIL
601: KFDDTTMIHK VSDEKKAQPS PDSSGPLKGS SRSSSSGQDS EDDDIEENVL VSKGKESCKE YIKSFLAAIP IRELQGDIKR GTVASTPLHH RLQIEFHYTE
701: AVPAEVAQPP QALTIEAPFE FSWPEPPPGM ELALAPAVAV A

Best Arabidopsis Sequence Match ( AT3G11760.1 )
(BLAST)

001: MVVKMMKWRP WPPLVTRKYE VKLSVKKLEG WDLVREGVPE KDRLTVEIRW KGPKATLGSL RRSVKRNFTK EAVGESDVVS WEDEEFQSLC SLTSYKDSLF
101: YPWEITFSVF TNGMKQGQKN KAPVVGTAFL NLAEYACVTD KKEFDINIPL TLSACVASET HPLLFVSLSL LELRTTPETS DSAAQTAVVP LPLPSPSPQQ
201: PTETHSVEKE DVSAIKAGLR KVKIFTEFVS TRKAKKACRE EEGRFSSFES SESLDDFETD FDEGKEELMS MRKSFSYGPL SYANGVGTSL NCGAKVSDED
301: EDWVYYSHRK SDVGAGCSDA EDSAAGLVYE ASLLPRRSIL PWRKRKLSFR SPKSKGEPLL KKDNGEEGGD DIDFDRRQLS SDEAHPPFGS KIDEDSSANP
401: RTSFSEFGED SFAIGSWEEK EVISRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPIKSQFDSL IREGSLEWRN LCENETYMQK
501: FPDKHFDLDT VLQAKIRPLT VIPGKSFVGF FHPDGMINEG RFEFLQGAMS FDSIWAEIIS LEESSANGDS YDDDSPPHVY IVSWNDHFFV LKVEKEAYYI
601: IDTLGERLYE GCDQAYVLKF DHKTVIHKIL HTEEAGSESE PESEILSRGK ESCKEYIKNF LAAIPIRELQ EDIKKGLAST APVHHRLQIE FHYTTNAEIT
701: SL

Arabidopsis Description

F26K24.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.