Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 4
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra038679.1-P | Field mustard | cytosol | 82.19 | 82.9 |
| CDY47916 | Canola | mitochondrion, nucleus | 81.91 | 82.73 |
| CDY71046 | Canola | cytosol | 68.09 | 82.41 |
| VIT_08s0032g01040.t01 | Wine grape | mitochondrion, nucleus | 65.24 | 61.07 |
| KRH72142 | Soybean | mitochondrion | 61.54 | 56.18 |
| KRH32877 | Soybean | mitochondrion | 61.54 | 56.18 |
| KRH68026 | Soybean | mitochondrion | 49.0 | 55.75 |
| PGSC0003DMT400055068 | Potato | mitochondrion | 59.54 | 54.64 |
| Solyc01g006890.2.1 | Tomato | mitochondrion | 59.26 | 54.38 |
| KRG96284 | Soybean | mitochondrion | 57.69 | 53.64 |
| GSMUA_Achr6P31090_001 | Banana | mitochondrion | 54.42 | 53.58 |
| GSMUA_Achr5P02610_001 | Banana | mitochondrion | 53.28 | 52.82 |
| GSMUA_Achr2P12860_001 | Banana | mitochondrion | 53.13 | 51.52 |
| Zm00001d021933_P001 | Maize | cytosol | 25.93 | 50.28 |
| Zm00001d033510_P001 | Maize | mitochondrion | 52.56 | 48.3 |
| KXG37933 | Sorghum | mitochondrion | 52.71 | 48.05 |
| Os03t0649000-01 | Rice | mitochondrion | 52.85 | 47.32 |
| TraesCS5D01G381300.1 | Wheat | mitochondrion | 49.72 | 47.23 |
| TraesCS5B01G026400.1 | Wheat | mitochondrion | 49.43 | 47.02 |
| TraesCS5A01G371800.1 | Wheat | mitochondrion | 49.43 | 46.83 |
| TraesCS5A01G027200.1 | Wheat | mitochondrion | 49.72 | 46.78 |
| TraesCS5D01G035100.1 | Wheat | mitochondrion | 49.43 | 46.64 |
| TraesCS5B01G373900.1 | Wheat | mitochondrion | 49.0 | 46.42 |
| Os12t0620600-01 | Rice | mitochondrion | 49.29 | 45.95 |
| HORVU5Hr1G092510.5 | Barley | mitochondrion | 50.14 | 45.71 |
| HORVU5Hr1G007680.4 | Barley | mitochondrion | 49.72 | 45.15 |
| GSMUA_Achr4P31330_001 | Banana | mitochondrion | 53.13 | 44.25 |
| KXG24034 | Sorghum | mitochondrion | 48.29 | 43.41 |
| Zm00001d041287_P001 | Maize | mitochondrion | 47.72 | 43.0 |
| GSMUA_Achr8P04760_001 | Banana | mitochondrion | 47.15 | 42.6 |
| AT2G10560.1 | Thale cress | nucleus | 15.95 | 40.29 |
| AT5G04860.1 | Thale cress | endoplasmic reticulum, extracellular | 44.02 | 39.51 |
| Zm00001d032528_P001 | Maize | plastid | 22.51 | 35.11 |
| AT2G25460.2 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 24.93 | 32.05 |
| GSMUA_Achr8P26590_001 | Banana | mitochondrion | 50.0 | 30.15 |
Protein Annotations
| MapMan:35.2 | EntrezGene:820349 | UniProt:A0A178VJE6 | ProteinID:AAF23192.1 | ProteinID:AEE75094.1 | ArrayExpress:AT3G11760 |
| EnsemblPlantsGene:AT3G11760 | RefSeq:AT3G11760 | TAIR:AT3G11760 | RefSeq:AT3G11760-TAIR-G | EnsemblPlants:AT3G11760.1 | TAIR:AT3G11760.1 |
| GO:GO:0008150 | InterPro:IPR019448 | RefSeq:NP_187782.1 | InterPro:NT-C2 | ProteinID:OAP05012.1 | PFAM:PF10358 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001017 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 |
| PO:PO:0025195 | PO:PO:0025281 | PFscan:PS51840 | PANTHER:PTHR31182 | PANTHER:PTHR31182:SF2 | UniProt:Q9SF22 |
| UniParc:UPI00000A25DF | SEG:seg | : | : | : | : |
Description
F26K24.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF22]
Coordinates
chr3:+:3717894..3721251
Molecular Weight (calculated)
79178.0 Da
IEP (calculated)
4.881
GRAVY (calculated)
-0.494
Length
702 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVKMMKWRP WPPLVTRKYE VKLSVKKLEG WDLVREGVPE KDRLTVEIRW KGPKATLGSL RRSVKRNFTK EAVGESDVVS WEDEEFQSLC SLTSYKDSLF
101: YPWEITFSVF TNGMKQGQKN KAPVVGTAFL NLAEYACVTD KKEFDINIPL TLSACVASET HPLLFVSLSL LELRTTPETS DSAAQTAVVP LPLPSPSPQQ
201: PTETHSVEKE DVSAIKAGLR KVKIFTEFVS TRKAKKACRE EEGRFSSFES SESLDDFETD FDEGKEELMS MRKSFSYGPL SYANGVGTSL NCGAKVSDED
301: EDWVYYSHRK SDVGAGCSDA EDSAAGLVYE ASLLPRRSIL PWRKRKLSFR SPKSKGEPLL KKDNGEEGGD DIDFDRRQLS SDEAHPPFGS KIDEDSSANP
401: RTSFSEFGED SFAIGSWEEK EVISRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPIKSQFDSL IREGSLEWRN LCENETYMQK
501: FPDKHFDLDT VLQAKIRPLT VIPGKSFVGF FHPDGMINEG RFEFLQGAMS FDSIWAEIIS LEESSANGDS YDDDSPPHVY IVSWNDHFFV LKVEKEAYYI
601: IDTLGERLYE GCDQAYVLKF DHKTVIHKIL HTEEAGSESE PESEILSRGK ESCKEYIKNF LAAIPIRELQ EDIKKGLAST APVHHRLQIE FHYTTNAEIT
701: SL
101: YPWEITFSVF TNGMKQGQKN KAPVVGTAFL NLAEYACVTD KKEFDINIPL TLSACVASET HPLLFVSLSL LELRTTPETS DSAAQTAVVP LPLPSPSPQQ
201: PTETHSVEKE DVSAIKAGLR KVKIFTEFVS TRKAKKACRE EEGRFSSFES SESLDDFETD FDEGKEELMS MRKSFSYGPL SYANGVGTSL NCGAKVSDED
301: EDWVYYSHRK SDVGAGCSDA EDSAAGLVYE ASLLPRRSIL PWRKRKLSFR SPKSKGEPLL KKDNGEEGGD DIDFDRRQLS SDEAHPPFGS KIDEDSSANP
401: RTSFSEFGED SFAIGSWEEK EVISRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPIKSQFDSL IREGSLEWRN LCENETYMQK
501: FPDKHFDLDT VLQAKIRPLT VIPGKSFVGF FHPDGMINEG RFEFLQGAMS FDSIWAEIIS LEESSANGDS YDDDSPPHVY IVSWNDHFFV LKVEKEAYYI
601: IDTLGERLYE GCDQAYVLKF DHKTVIHKIL HTEEAGSESE PESEILSRGK ESCKEYIKNF LAAIPIRELQ EDIKKGLAST APVHHRLQIE FHYTTNAEIT
701: SL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.