CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033510_P001	Maize	mitochondrion	92.47	93.19
Zm00001d021933_P001	Maize	cytosol	40.65	86.46
Os03t0649000-01	Rice	mitochondrion	80.78	79.34
Zm00001d032528_P001	Maize	plastid	44.42	76.0
HORVU5Hr1G092510.5	Barley	mitochondrion	75.06	75.06
TraesCS5A01G371800.1	Wheat	mitochondrion	72.08	74.9
TraesCS5B01G373900.1	Wheat	mitochondrion	71.95	74.76
TraesCS5D01G381300.1	Wheat	mitochondrion	71.43	74.42
KXG24034	Sorghum	mitochondrion	68.05	67.09
GSMUA_Achr5P02610_001	Banana	mitochondrion	55.45	60.31
PGSC0003DMT400005067	Potato	cytosol	21.43	60.22
GSMUA_Achr6P31090_001	Banana	mitochondrion	54.55	58.91
GSMUA_Achr2P12860_001	Banana	mitochondrion	54.94	58.43
CDY71046	Canola	cytosol	42.73	56.72
VIT_08s0032g01040.t01	Wine grape	mitochondrion, nucleus	54.42	55.87
PGSC0003DMT400036595	Potato	nucleus, plastid	24.68	53.98
Bra038679.1-P	Field mustard	cytosol	48.7	53.88
CDY47916	Canola	mitochondrion, nucleus	48.57	53.81
KRH72142	Soybean	mitochondrion	53.12	53.19
KRH32877	Soybean	mitochondrion	52.99	53.06
AT3G11760.1	Thale cress	nucleus	48.05	52.71
GSMUA_Achr4P31330_001	Banana	mitochondrion	57.01	52.08
KRG96284	Soybean	mitochondrion	50.91	51.92
Solyc01g006890.2.1	Tomato	mitochondrion	51.43	51.76
PGSC0003DMT400055068	Potato	mitochondrion	51.04	51.37
KRH68026	Soybean	mitochondrion	41.04	51.22
KRH34623	Soybean	cytosol, extracellular, nucleus	45.19	49.01
Solyc11g006410.1.1	Tomato	nucleus	46.88	47.31
PGSC0003DMT400065418	Potato	extracellular, golgi	46.1	46.47
CDX70194	Canola	extracellular, vacuole	41.3	44.29
CDX98789	Canola	endoplasmic reticulum, extracellular	41.43	43.34
Bra009421.1-P	Field mustard	endoplasmic reticulum, extracellular	41.04	42.88
AT2G10560.1	Thale cress	nucleus	15.19	42.09
AT5G04860.1	Thale cress	endoplasmic reticulum, extracellular	41.3	40.66
KRH07454	Soybean	endoplasmic reticulum	8.83	35.42
EES00132	Sorghum	mitochondrion	24.03	35.04
Solyc04g009790.2.1	Tomato	extracellular, golgi, plasma membrane	45.97	28.21
PGSC0003DMT400056835	Potato	cytosol, nucleus	14.55	26.92

Protein Annotations

EnsemblPlants:KXG37933	EnsemblPlantsGene:SORBI_3001G153200	InterPro:IPR019448	InterPro:NT-C2	PANTHER:PTHR31182	PANTHER:PTHR31182:SF6
PFAM:PF10358	PFscan:PS51840	ProteinID:KXG37933	ProteinID:KXG37933.1	SEG:seg	UniParc:UPI00081AE966
UniProt:A0A1B6QJ35	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:12322042..12325808

Molecular Weight (calculated)

84756.2 Da

IEP (calculated)

4.675

GRAVY (calculated)

-0.459

Length

770 amino acids

Sequence
(BLAST)

001: MVARMMRWPR PPAARKFRVR LVVLRAEGLP PPPPSPSPAP APAPPAEPAS PEREAAPGVA PAPRAAVAAE VRWKGPRASA LGSLRRAAVR RNRTREDAGA
101: AWEEEFESVV TLAAASQREG ATFHPWELAF CVFSDINKGP KNKPSILGTV SLNLADYALT AGETIEIILP LSVPGGAPEP APSLHLTLSM VELRAFQETS
201: DASQRPAATL PLSPSSGDSL PGGKDEVSVI KAGLRKVKIL TDLVSTRRPK KTCQDEEGGE DKFYVNSDGA EYPCDTESLD DDLDDIVQED EFGDSTIRKS
301: FSYGSLQSVN YVGGLVYAHA KIDGEHEDWI YYSNRKSDAG FHLEKVLPST TETGLLTAKR SILPWRKRKL SLRSLKAKGE PLLKKAYGEE GGDDIDYDRR
401: LLTSSDESVS EGSGNGSANG MVSEFGDDNF VIGNWELKEI ISRDGHMKLS SQVFFASIDQ RSERAAGESA CTALVAVIAD WFQANQNMMP IQSQFDSLIR
501: EGSLEWRNLC ENETYRERFP DKHFDLETVL HAKIRPLTVS PSKSFIGFFQ PEGNDDMSGF DFLNGAMSFD NIWDEIAQAA EFSSSENPNL YIVSWNDHFF
601: LLKVEHDAYY IIDTLGERLY EGCSQAYILK FDNNTTIHKV PGEKKPSSPD SSDPLKDSSG SESSSTDQDS ENDTEEDVLV SKGKESCKEF IKSFLAAIPI
701: RELQVDIKKG LMASTPLHHR LQIEFQYTQS SPKETASANQ LLTMDAPFEF SWPEPPPTME VALTPAVSVV

Best Arabidopsis Sequence Match ( AT3G11760.1 )
(BLAST)

001: MVVKMMKWRP WPPLVTRKYE VKLSVKKLEG WDLVREGVPE KDRLTVEIRW KGPKATLGSL RRSVKRNFTK EAVGESDVVS WEDEEFQSLC SLTSYKDSLF
101: YPWEITFSVF TNGMKQGQKN KAPVVGTAFL NLAEYACVTD KKEFDINIPL TLSACVASET HPLLFVSLSL LELRTTPETS DSAAQTAVVP LPLPSPSPQQ
201: PTETHSVEKE DVSAIKAGLR KVKIFTEFVS TRKAKKACRE EEGRFSSFES SESLDDFETD FDEGKEELMS MRKSFSYGPL SYANGVGTSL NCGAKVSDED
301: EDWVYYSHRK SDVGAGCSDA EDSAAGLVYE ASLLPRRSIL PWRKRKLSFR SPKSKGEPLL KKDNGEEGGD DIDFDRRQLS SDEAHPPFGS KIDEDSSANP
401: RTSFSEFGED SFAIGSWEEK EVISRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPIKSQFDSL IREGSLEWRN LCENETYMQK
501: FPDKHFDLDT VLQAKIRPLT VIPGKSFVGF FHPDGMINEG RFEFLQGAMS FDSIWAEIIS LEESSANGDS YDDDSPPHVY IVSWNDHFFV LKVEKEAYYI
601: IDTLGERLYE GCDQAYVLKF DHKTVIHKIL HTEEAGSESE PESEILSRGK ESCKEYIKNF LAAIPIRELQ EDIKKGLAST APVHHRLQIE FHYTTNAEIT
701: SL

Arabidopsis Description

F26K24.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.