Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400005067 | Potato | cytosol | 36.33 | 36.86 |
| AT5G04860.1 | Thale cress | endoplasmic reticulum, extracellular | 83.45 | 29.67 |
| CDX98789 | Canola | endoplasmic reticulum, extracellular | 66.55 | 25.14 |
| CDX70194 | Canola | extracellular, vacuole | 63.31 | 24.51 |
| Bra009421.1-P | Field mustard | endoplasmic reticulum, extracellular | 64.39 | 24.29 |
| GSMUA_Achr6P31090_001 | Banana | mitochondrion | 42.45 | 16.55 |
| GSMUA_Achr5P02610_001 | Banana | mitochondrion | 41.73 | 16.38 |
| TraesCS5A01G027200.1 | Wheat | mitochondrion | 43.53 | 16.22 |
| TraesCS5A01G371800.1 | Wheat | mitochondrion | 43.17 | 16.19 |
| TraesCS5B01G373900.1 | Wheat | mitochondrion | 43.17 | 16.19 |
| TraesCS5B01G026400.1 | Wheat | mitochondrion | 42.81 | 16.12 |
| TraesCS5D01G381300.1 | Wheat | mitochondrion | 42.81 | 16.1 |
| Zm00001d033510_P001 | Maize | mitochondrion | 43.88 | 15.97 |
| AT3G11760.1 | Thale cress | nucleus | 40.29 | 15.95 |
| Os12t0620600-01 | Rice | mitochondrion | 43.17 | 15.94 |
| TraesCS5D01G035100.1 | Wheat | mitochondrion | 42.45 | 15.86 |
| PGSC0003DMT400065418 | Potato | extracellular, golgi | 43.53 | 15.84 |
| GSMUA_Achr2P12860_001 | Banana | mitochondrion | 40.65 | 15.61 |
| HORVU5Hr1G092510.5 | Barley | mitochondrion | 43.17 | 15.58 |
| Os03t0649000-01 | Rice | mitochondrion | 43.88 | 15.56 |
| HORVU5Hr1G007680.4 | Barley | mitochondrion | 43.17 | 15.52 |
| KXG24034 | Sorghum | mitochondrion | 43.17 | 15.36 |
| KRH34623 | Soybean | cytosol, extracellular, nucleus | 38.85 | 15.21 |
| Solyc11g006410.1.1 | Tomato | nucleus | 41.73 | 15.2 |
| AT2G25460.2 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 29.86 | 15.2 |
| KXG37933 | Sorghum | mitochondrion | 42.09 | 15.19 |
| Zm00001d041287_P001 | Maize | mitochondrion | 41.73 | 14.89 |
| GSMUA_Achr4P31330_001 | Banana | mitochondrion | 44.24 | 14.59 |
| GSMUA_Achr8P04760_001 | Banana | mitochondrion | 39.93 | 14.29 |
| GSMUA_Achr8P26590_001 | Banana | mitochondrion | 42.45 | 10.14 |
| Solyc04g009790.2.1 | Tomato | extracellular, golgi, plasma membrane | 41.37 | 9.16 |
| Zm00001d021933_P001 | Maize | cytosol | 8.99 | 6.91 |
| PGSC0003DMT400036595 | Potato | nucleus, plastid | 8.27 | 6.53 |
| KRH07454 | Soybean | endoplasmic reticulum | 0.72 | 1.04 |
| PGSC0003DMT400056835 | Potato | cytosol, nucleus | 0.0 | 0.0 |
| Zm00001d032528_P001 | Maize | plastid | 0.0 | 0.0 |
Protein Annotations
| ArrayExpress:AT2G10560 | EnsemblPlants:AT2G10560.1 | EnsemblPlantsGene:AT2G10560 | EntrezGene:815517 | PANTHER:PTHR31182 | PANTHER:PTHR31182:SF3 |
| ProteinID:AAD28672.1 | ProteinID:AEC06150.1 | RefSeq:AT2G10560 | RefSeq:AT2G10560-TAIR-G | RefSeq:NP_178850.1 | SEG:seg |
| TAIR:AT2G10560 | TAIR:AT2G10560.1 | UniParc:UPI00000AAC43 | UniProt:Q9SI86 | MapMan:35.2 | : |
Description
Chaperone [Source:UniProtKB/TrEMBL;Acc:Q9SI86]
Coordinates
chr2:-:4109862..4110698
Molecular Weight (calculated)
32230.1 Da
IEP (calculated)
4.974
GRAVY (calculated)
-0.542
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MCENEEYRER FPDKHFDLET VLQAKVRPIC VVPERTFIGF FHREKSKEEE EKEDVSLDFL KGVMSFDSIW EEIMKQEPEE SASEHVIYIV SWNDHYFVLL
101: VNHDAYYIID TLGERVYEGC NQAYVLKFDQ DAEIKRLPSV IKDNKADMGS QKQGGKNKYE QPERSKESEE QGEEVVVCRG KESCREYIKS FLAAIPIQQV
201: KADMKEGLVS SFHHRLQIEL YYTKHLHHRQ PNMFESSTTK VTVSEATVSM TVAWLLASQF SNSGGFGCEM AELLGIKV
101: VNHDAYYIID TLGERVYEGC NQAYVLKFDQ DAEIKRLPSV IKDNKADMGS QKQGGKNKYE QPERSKESEE QGEEVVVCRG KESCREYIKS FLAAIPIQQV
201: KADMKEGLVS SFHHRLQIEL YYTKHLHHRQ PNMFESSTTK VTVSEATVSM TVAWLLASQF SNSGGFGCEM AELLGIKV
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.