Factsheet for GSMUA_Achr2P12860_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 6
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P02610_001	Banana	mitochondrion	75.0	76.69
GSMUA_Achr6P31090_001	Banana	mitochondrion	64.36	65.36
GSMUA_Achr4P31330_001	Banana	mitochondrion	75.0	64.41
VIT_08s0032g01040.t01	Wine grape	mitochondrion, nucleus	60.36	58.27
KRH68026	Soybean	mitochondrion	49.17	57.7
PGSC0003DMT400005067	Potato	cytosol	21.55	56.93
CDY71046	Canola	cytosol	44.75	55.86
Os12t0620600-01	Rice	mitochondrion	57.73	55.51
Zm00001d033510_P001	Maize	mitochondrion	58.43	55.37
KRH32877	Soybean	mitochondrion	58.7	55.27
KRG96284	Soybean	mitochondrion	57.46	55.1
KRH72142	Soybean	mitochondrion	58.43	55.01
KXG37933	Sorghum	mitochondrion	58.43	54.94
Bra038679.1-P	Field mustard	cytosol	52.62	54.74
CDY47916	Canola	mitochondrion, nucleus	52.49	54.68
Zm00001d021933_P001	Maize	cytosol	27.21	54.42
Os03t0649000-01	Rice	mitochondrion	58.84	54.34
TraesCS5B01G026400.1	Wheat	mitochondrion	55.39	54.34
TraesCS5A01G027200.1	Wheat	mitochondrion	55.94	54.29
PGSC0003DMT400036595	Potato	nucleus, plastid	26.38	54.26
TraesCS5D01G035100.1	Wheat	mitochondrion	55.66	54.17
PGSC0003DMT400055068	Potato	mitochondrion	57.18	54.12
TraesCS5D01G381300.1	Wheat	mitochondrion	54.97	53.86
TraesCS5A01G371800.1	Wheat	mitochondrion	54.97	53.71
TraesCS5B01G373900.1	Wheat	mitochondrion	54.7	53.44
AT3G11760.1	Thale cress	nucleus	51.52	53.13
Solyc01g006890.2.1	Tomato	mitochondrion	56.08	53.07
KXG24034	Sorghum	mitochondrion	55.66	51.6
HORVU5Hr1G007680.4	Barley	mitochondrion	54.83	51.36
HORVU5Hr1G092510.5	Barley	mitochondrion	54.42	51.17
Zm00001d041287_P001	Maize	mitochondrion	54.83	50.96
KRH34623	Soybean	cytosol, extracellular, nucleus	49.31	50.28
GSMUA_Achr8P04760_001	Banana	mitochondrion	53.45	49.81
Solyc11g006410.1.1	Tomato	nucleus	51.38	48.75
PGSC0003DMT400065418	Potato	extracellular, golgi	50.83	48.17
CDX70194	Canola	extracellular, vacuole	45.03	45.4
CDX98789	Canola	endoplasmic reticulum, extracellular	45.03	44.29
Bra009421.1-P	Field mustard	endoplasmic reticulum, extracellular	44.34	43.55
Zm00001d032528_P001	Maize	plastid	26.24	42.22
GSMUA_Achr8P17400_001	Banana	mitochondrion	25.41	41.72
AT5G04860.1	Thale cress	endoplasmic reticulum, extracellular	44.48	41.18
AT2G10560.1	Thale cress	nucleus	15.61	40.65
KRH07454	Soybean	endoplasmic reticulum	9.67	36.46
GSMUA_Achr8P26590_001	Banana	mitochondrion	58.15	36.17
GSMUA_Achr5P06470_001	Banana	nucleus	22.79	34.96
Solyc04g009790.2.1	Tomato	extracellular, golgi, plasma membrane	50.69	29.24
PGSC0003DMT400056835	Potato	cytosol, nucleus	15.75	27.4

Protein Annotations

EnsemblPlants:GSMUA_Achr2P12860_001	EnsemblPlants:GSMUA_Achr2T12860_001	EnsemblPlantsGene:GSMUA_Achr2G12860_001	InterPro:IPR019448	InterPro:NT-C2	PANTHER:PTHR31182
PANTHER:PTHR31182:SF2	PFAM:PF10358	PFscan:PS51840	SEG:seg	UniParc:UPI00029519C6	UniProt:M0S7H7
MapMan:35.2	:	:	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr2G12860_001]

Coordinates

chr2:+:15175839..15180719

Molecular Weight (calculated)

80970.3 Da

IEP (calculated)

5.264

GRAVY (calculated)

-0.409

Length

724 amino acids

Sequence
(BLAST)

001: MAVTMMRWRP WPPLVSKKFQ VRLVVRRVEG VSAGDEAAEE VRRKVAAEVR WKGPKVALSS LRRTVKRNRT REEEVGDGGV VAWNEEFEMV CTLTAHRRNA
101: FHPWEIVFAV FNGSNHGAKN KESVLGVASV NIAEFTSTAD QEIELYLPLL LPGAVESHLA LHLFILQLAL NILELRPSQD SSDMIQRSPA APSSPFSGDV
201: IPPEKDELSA LKAGLRKVKI LTELVSTRKS KKTCQDDAGS EGKCSTRSDD AEFPYPCDTD SPDDELDEEV EESKEDTNVR KSFSYGTLAS VNNIGYEMRE
301: DGDHEDCIYY NHRRSDVGCS HAEDTIASVP EFSLSKRSIL PWKKRKLSFR SPKPKGEPLL KKAYEEGGDD IDYDRRLLSS SDESLSAGRH KWYDDSAMNR
401: SSLSDFGDDY FVIGSWESKE LVSRDGQMKL ATQVFFASID QRSERASGES ACTALVAVIA DWFHRNKDMM PIKSQFDSLI REGSLEWRNL CDNQAYRECF
501: PDKHFDLETV LQAKIRPLSV VPRKSFIGFF HPEGPASNSG FDFLHGAMSF DSIWDEISRI GLDCPSDGCC PQLYIVSWND HFFVLMVEHH ACYIIDTLGE
601: RLYEGCQQAY ILKFDDSTAI HKVSSGSKNV DSEAAAAGNG EACKEYIKSF LAAIPIRELE ADIKKGRISS TPLHRRLQIE FHYTELSSEL GLATLSSSTE
701: SVPELSWPVK PAGAISTAPA VLVV

Best Arabidopsis Sequence Match ( AT3G11760.1 )
(BLAST)

001: MVVKMMKWRP WPPLVTRKYE VKLSVKKLEG WDLVREGVPE KDRLTVEIRW KGPKATLGSL RRSVKRNFTK EAVGESDVVS WEDEEFQSLC SLTSYKDSLF
101: YPWEITFSVF TNGMKQGQKN KAPVVGTAFL NLAEYACVTD KKEFDINIPL TLSACVASET HPLLFVSLSL LELRTTPETS DSAAQTAVVP LPLPSPSPQQ
201: PTETHSVEKE DVSAIKAGLR KVKIFTEFVS TRKAKKACRE EEGRFSSFES SESLDDFETD FDEGKEELMS MRKSFSYGPL SYANGVGTSL NCGAKVSDED
301: EDWVYYSHRK SDVGAGCSDA EDSAAGLVYE ASLLPRRSIL PWRKRKLSFR SPKSKGEPLL KKDNGEEGGD DIDFDRRQLS SDEAHPPFGS KIDEDSSANP
401: RTSFSEFGED SFAIGSWEEK EVISRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPIKSQFDSL IREGSLEWRN LCENETYMQK
501: FPDKHFDLDT VLQAKIRPLT VIPGKSFVGF FHPDGMINEG RFEFLQGAMS FDSIWAEIIS LEESSANGDS YDDDSPPHVY IVSWNDHFFV LKVEKEAYYI
601: IDTLGERLYE GCDQAYVLKF DHKTVIHKIL HTEEAGSESE PESEILSRGK ESCKEYIKNF LAAIPIRELQ EDIKKGLAST APVHHRLQIE FHYTTNAEIT
701: SL

Arabidopsis Description

F26K24.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.