Factsheet for Zm00001d021933_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 1
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032528_P001	Maize	plastid	57.73	46.44
Zm00001d033510_P001	Maize	mitochondrion	89.5	42.41
KXG37933	Sorghum	mitochondrion	86.46	40.65
PGSC0003DMT400036595	Potato	nucleus, plastid	35.91	36.93
Os03t0649000-01	Rice	mitochondrion	75.69	34.95
TraesCS5B01G373900.1	Wheat	mitochondrion	69.61	34.01
TraesCS5D01G381300.1	Wheat	mitochondrion	69.34	33.96
TraesCS5A01G371800.1	Wheat	mitochondrion	69.34	33.87
HORVU5Hr1G092510.5	Barley	mitochondrion	69.34	32.6
Zm00001d041287_P001	Maize	mitochondrion	63.54	29.52
CDY71046	Canola	cytosol	46.13	28.79
KRH07454	Soybean	endoplasmic reticulum	15.19	28.65
KRH68026	Soybean	mitochondrion	48.62	28.53
GSMUA_Achr5P02610_001	Banana	mitochondrion	54.7	27.97
GSMUA_Achr6P31090_001	Banana	mitochondrion	54.14	27.49
GSMUA_Achr2P12860_001	Banana	mitochondrion	54.42	27.21
PGSC0003DMT400005067	Potato	cytosol	19.89	26.28
VIT_08s0032g01040.t01	Wine grape	mitochondrion, nucleus	54.42	26.27
AT3G11760.1	Thale cress	nucleus	50.28	25.93
Bra038679.1-P	Field mustard	cytosol	48.07	25.0
CDY47916	Canola	mitochondrion, nucleus	47.51	24.75
KRH32877	Soybean	mitochondrion	52.49	24.71
KRH72142	Soybean	mitochondrion	51.93	24.45
Solyc01g006890.2.1	Tomato	mitochondrion	51.38	24.31
KRH34623	Soybean	cytosol, extracellular, nucleus	47.51	24.23
PGSC0003DMT400055068	Potato	mitochondrion	50.0	23.66
KRG96284	Soybean	mitochondrion	48.9	23.44
GSMUA_Achr4P31330_001	Banana	mitochondrion	54.42	23.37
Solyc11g006410.1.1	Tomato	nucleus	46.69	22.15
PGSC0003DMT400065418	Potato	extracellular, golgi	45.58	21.6
CDX70194	Canola	extracellular, vacuole	38.95	19.64
CDX98789	Canola	endoplasmic reticulum, extracellular	39.23	19.29
Bra009421.1-P	Field mustard	endoplasmic reticulum, extracellular	38.67	19.0
AT5G04860.1	Thale cress	endoplasmic reticulum, extracellular	39.5	18.29
PGSC0003DMT400056835	Potato	cytosol, nucleus	16.85	14.66
Solyc04g009790.2.1	Tomato	extracellular, golgi, plasma membrane	45.3	13.07
AT2G10560.1	Thale cress	nucleus	6.91	8.99
Zm00001d039472_P001	Maize	mitochondrion	7.73	5.92
Zm00001d008799_P001	Maize	mitochondrion, plastid	6.91	5.45

Protein Annotations

EnsemblPlants:Zm00001d021933_P001	EnsemblPlants:Zm00001d021933_T001	EnsemblPlantsGene:Zm00001d021933	InterPro:IPR019448	InterPro:NT-C2	PANTHER:PTHR31182
PANTHER:PTHR31182:SF6	PFscan:PS51840	ProteinID:ONM59086.1	SEG:seg	UniParc:UPI00097E40AE	UniProt:A0A1R3QZ56
MapMan:35.2	:	:	:	:	:

Description

No Description!

Coordinates

chr7:-:166111924..166114275

Molecular Weight (calculated)

40518.6 Da

IEP (calculated)

4.595

GRAVY (calculated)

-0.358

Length

362 amino acids

Sequence
(BLAST)

001: MVFYQFPLMD INKGPKNKPS ILGTVSLNLA DYALTAGETI EIILPLSIPG GAPERASSLH LTLSMVELRA FQETSDASQR SAATLPLSPS PSDSLPGGKY
101: EVLVIKAGLR KVKILTDLVS TRRPKKTCQG GGEDKFCVNS DSVEYPCDTE SLDDDLDDRV EEDEFGDSTI RKSFSYGYLQ SVNYVGGLVY AHAKIDGEHE
201: DWIYYSNRKT DVGFHVEKGS RGYGLANTMV SEFGDDNFVI ENWELKEIIS CDGRMKLSSQ MFFASIDQRS ERAAGETACT SLVAIIADWF QANQNIMPIQ
301: SQFDSLIREG SLEWRNLCEN ETYRKRFPDK HFDLETVLHT KIHPLTVSPS NLLFDLSYYD YG

Best Arabidopsis Sequence Match ( AT3G11760.1 )
(BLAST)

001: MVVKMMKWRP WPPLVTRKYE VKLSVKKLEG WDLVREGVPE KDRLTVEIRW KGPKATLGSL RRSVKRNFTK EAVGESDVVS WEDEEFQSLC SLTSYKDSLF
101: YPWEITFSVF TNGMKQGQKN KAPVVGTAFL NLAEYACVTD KKEFDINIPL TLSACVASET HPLLFVSLSL LELRTTPETS DSAAQTAVVP LPLPSPSPQQ
201: PTETHSVEKE DVSAIKAGLR KVKIFTEFVS TRKAKKACRE EEGRFSSFES SESLDDFETD FDEGKEELMS MRKSFSYGPL SYANGVGTSL NCGAKVSDED
301: EDWVYYSHRK SDVGAGCSDA EDSAAGLVYE ASLLPRRSIL PWRKRKLSFR SPKSKGEPLL KKDNGEEGGD DIDFDRRQLS SDEAHPPFGS KIDEDSSANP
401: RTSFSEFGED SFAIGSWEEK EVISRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPIKSQFDSL IREGSLEWRN LCENETYMQK
501: FPDKHFDLDT VLQAKIRPLT VIPGKSFVGF FHPDGMINEG RFEFLQGAMS FDSIWAEIIS LEESSANGDS YDDDSPPHVY IVSWNDHFFV LKVEKEAYYI
601: IDTLGERLYE GCDQAYVLKF DHKTVIHKIL HTEEAGSESE PESEILSRGK ESCKEYIKNF LAAIPIRELQ EDIKKGLAST APVHHRLQIE FHYTTNAEIT
701: SL

Arabidopsis Description

F26K24.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.