Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d039472_P001 | Maize | mitochondrion | 75.6 | 73.36 |
| EES00132 | Sorghum | mitochondrion | 71.02 | 61.74 |
| TraesCS3B01G124200.1 | Wheat | mitochondrion | 66.88 | 51.86 |
| TraesCS3A01G105700.1 | Wheat | mitochondrion | 64.49 | 49.25 |
| Os01t0194000-01 | Rice | cytosol | 49.24 | 46.79 |
| TraesCS3D01G107900.2 | Wheat | mitochondrion | 57.95 | 41.89 |
| HORVU3Hr1G019320.2 | Barley | cytosol, plastid | 52.07 | 38.42 |
| GSMUA_Achr5P06470_001 | Banana | nucleus | 21.79 | 21.19 |
| KRH05176 | Soybean | cytosol | 27.23 | 20.39 |
| Bra007798.1-P | Field mustard | golgi, mitochondrion, nucleus, plastid | 23.31 | 19.93 |
| KRH15881 | Soybean | cytosol | 26.36 | 19.74 |
| AT2G25460.2 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 22.88 | 19.23 |
| CDY11529 | Canola | golgi, mitochondrion, nucleus, plastid | 22.0 | 18.84 |
| CDX76759 | Canola | golgi, mitochondrion, nucleus, plastid | 22.0 | 18.74 |
| PGSC0003DMT400082714 | Potato | nucleus | 23.09 | 18.43 |
| KRH61765 | Soybean | mitochondrion | 24.84 | 18.3 |
| Zm00001d033510_P001 | Maize | mitochondrion | 29.63 | 17.8 |
| VIT_04s0008g05510.t01 | Wine grape | nucleus | 23.09 | 17.79 |
| Solyc08g059710.2.1 | Tomato | nucleus | 21.57 | 17.74 |
| Zm00001d041287_P001 | Maize | mitochondrion | 29.19 | 17.2 |
| KRH52431 | Soybean | golgi, mitochondrion, nucleus, plastid | 23.09 | 17.04 |
| Zm00001d032528_P001 | Maize | plastid | 10.46 | 10.67 |
| Zm00001d021933_P001 | Maize | cytosol | 5.45 | 6.91 |
Protein Annotations
| EnsemblPlants:Zm00001d008799_P001 | EnsemblPlants:Zm00001d008799_T001 | EnsemblPlantsGene:Zm00001d008799 | PANTHER:PTHR31182 | PANTHER:PTHR31182:SF7 | ProteinID:AQK90722.1 |
| SEG:seg | UniParc:UPI0008454FE3 | UniProt:A0A1D6FFM2 | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr8:+:20773065..20776388
Molecular Weight (calculated)
50148.3 Da
IEP (calculated)
8.207
GRAVY (calculated)
-0.428
Length
459 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVARKPQQQ PAGVARRRGG GVRVGPARLE GLPAAWAGAA AAAVKVKWPA PGGALSQMLT GRWARGVTAV EAVGAGGTVR WEPRDGNRFR LDDVVGPAGR
101: PERGVFFSVL YGFQEQGRGN KELVRLEEIG TAMISLEECC WEMQLQQHDH QLVAVPVRVR KDGWASDAML YVDVELVDAN TRPDVDRAVS FREKPRTYMA
201: PPPTMRGSRK SLESATCHDV LDLKQLLDLA EKEGRVAVYG NIRSSDTSSV SSTSSSSSTI SVSSASTSGG ASPEPASTSK RRFLPWTRRS RDFDKRTAES
301: LSQELPTKCT PESFASLSGA MSFDDIWREI AGGGGRGRGP GGRADVYIVS WNDHFFALKV ESDCYYVVDT LGERLHEGCD KAYMLRFDGS SEMRAEGTEE
401: VVVAGKECCR EFIKRFLAAI PLREELEIEK KGGSGIDGGG APHQRLQIEF HFTAFTRRQ
101: PERGVFFSVL YGFQEQGRGN KELVRLEEIG TAMISLEECC WEMQLQQHDH QLVAVPVRVR KDGWASDAML YVDVELVDAN TRPDVDRAVS FREKPRTYMA
201: PPPTMRGSRK SLESATCHDV LDLKQLLDLA EKEGRVAVYG NIRSSDTSSV SSTSSSSSTI SVSSASTSGG ASPEPASTSK RRFLPWTRRS RDFDKRTAES
301: LSQELPTKCT PESFASLSGA MSFDDIWREI AGGGGRGRGP GGRADVYIVS WNDHFFALKV ESDCYYVVDT LGERLHEGCD KAYMLRFDGS SEMRAEGTEE
401: VVVAGKECCR EFIKRFLAAI PLREELEIEK KGGSGIDGGG APHQRLQIEF HFTAFTRRQ
001: MAKKVRKLHV TVKPVRLDGL PAILGDETAG KNLSAMVEVK WKGPVSGFGL GFVPFYRSNR PVNHTSSKPI ALGSNHVEWE EEFERVCCIV GPWNLSFNVF
101: YGENMDAKNK KSLIGKASLD LSELASKQES TVERKLPIRS KGSVLSKEAT LVVNVTFSEV RTEPDDFMQL GQISVDSAIP KKKSTSRRGG GSHFDSFSSP
201: ATASSSGGRS PVVETGLFSS PDENQSEPGQ KAGFNWWKRR RLSFSMTWRR EPREDEVTKT STKPSEELEK PATEIPIEAN KWVMKDLVSR DGKSKLKSEV
301: YLASIDQRSE QAAGEAACAA VAVVVAHWFH ANPKLINPSG TAFDSLITQG SSLWQSLCDK ESYLRLFPNR HFDLETIVSA NLRPVRVCTD KSFTGLFSPE
401: RFASLDGLMS FDQIWDEVEK EVALASSNGE TRVYIVSWND HFFVVKADLD GFCVIDSLGE RLFEGCKQAY ILKFDDSSLM YEKEESSEKL VCEGKKCCRE
501: YIKSFLAAIP VAELAAKEEK GNVVDVSLLH ERLQIDLHHI ILTSSD
101: YGENMDAKNK KSLIGKASLD LSELASKQES TVERKLPIRS KGSVLSKEAT LVVNVTFSEV RTEPDDFMQL GQISVDSAIP KKKSTSRRGG GSHFDSFSSP
201: ATASSSGGRS PVVETGLFSS PDENQSEPGQ KAGFNWWKRR RLSFSMTWRR EPREDEVTKT STKPSEELEK PATEIPIEAN KWVMKDLVSR DGKSKLKSEV
301: YLASIDQRSE QAAGEAACAA VAVVVAHWFH ANPKLINPSG TAFDSLITQG SSLWQSLCDK ESYLRLFPNR HFDLETIVSA NLRPVRVCTD KSFTGLFSPE
401: RFASLDGLMS FDQIWDEVEK EVALASSNGE TRVYIVSWND HFFVVKADLD GFCVIDSLGE RLFEGCKQAY ILKFDDSSLM YEKEESSEKL VCEGKKCCRE
501: YIKSFLAAIP VAELAAKEEK GNVVDVSLLH ERLQIDLHHI ILTSSD
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04860.1); Has 108 Blast hits to 69 proteins in 11 species: Archae - 0; Bacteria - 0; Meta /.../0; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). [Source:TAIR;Acc:AT2G25460]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.