Factsheet for Zm00001d032528_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 3
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021933_P001	Maize	cytosol	46.44	57.73
Zm00001d033510_P001	Maize	mitochondrion	77.56	45.68
KXG37933	Sorghum	mitochondrion	76.0	44.42
Os03t0649000-01	Rice	mitochondrion	63.78	36.61
HORVU5Hr1G092510.5	Barley	mitochondrion	58.44	34.16
TraesCS5B01G373900.1	Wheat	mitochondrion	54.44	33.06
TraesCS5A01G371800.1	Wheat	mitochondrion	53.78	32.66
TraesCS5D01G381300.1	Wheat	mitochondrion	53.56	32.61
KRH07454	Soybean	endoplasmic reticulum	12.89	30.21
Zm00001d041287_P001	Maize	mitochondrion	49.11	28.37
PGSC0003DMT400036595	Potato	nucleus, plastid	21.56	27.56
GSMUA_Achr5P02610_001	Banana	mitochondrion	41.56	26.41
GSMUA_Achr2P12860_001	Banana	mitochondrion	42.22	26.24
KRH68026	Soybean	mitochondrion	35.78	26.09
GSMUA_Achr6P31090_001	Banana	mitochondrion	41.11	25.95
VIT_08s0032g01040.t01	Wine grape	mitochondrion, nucleus	40.44	24.27
KRH32877	Soybean	mitochondrion	38.67	22.63
AT3G11760.1	Thale cress	nucleus	35.11	22.51
CDY47916	Canola	mitochondrion, nucleus	34.67	22.45
GSMUA_Achr4P31330_001	Banana	mitochondrion	42.0	22.42
Bra038679.1-P	Field mustard	cytosol	34.44	22.27
KRH72142	Soybean	mitochondrion	38.0	22.24
KRG96284	Soybean	mitochondrion	36.67	21.85
Solyc01g006890.2.1	Tomato	mitochondrion	36.89	21.7
PGSC0003DMT400055068	Potato	mitochondrion	36.67	21.57
KRH34623	Soybean	cytosol, extracellular, nucleus	34.0	21.55
CDY71046	Canola	cytosol	27.11	21.03
PGSC0003DMT400065418	Potato	extracellular, golgi	32.22	18.98
Solyc11g006410.1.1	Tomato	nucleus	32.0	18.87
CDX70194	Canola	extracellular, vacuole	26.89	16.85
Bra009421.1-P	Field mustard	endoplasmic reticulum, extracellular	26.0	15.88
PGSC0003DMT400056835	Potato	cytosol, nucleus	14.67	15.87
CDX98789	Canola	endoplasmic reticulum, extracellular	25.78	15.76
AT5G04860.1	Thale cress	endoplasmic reticulum, extracellular	26.44	15.22
Solyc04g009790.2.1	Tomato	extracellular, golgi, plasma membrane	31.33	11.24
Zm00001d008799_P001	Maize	mitochondrion, plastid	10.67	10.46
Zm00001d039472_P001	Maize	mitochondrion	10.89	10.36
PGSC0003DMT400005067	Potato	cytosol	0.0	0.0
AT2G10560.1	Thale cress	nucleus	0.0	0.0

Protein Annotations

EnsemblPlants:Zm00001d032528_P001	EnsemblPlants:Zm00001d032528_T001	EnsemblPlantsGene:Zm00001d032528	InterPro:IPR019448	InterPro:NT-C2	PANTHER:PTHR31182
PANTHER:PTHR31182:SF6	PFAM:PF10358	PFscan:PS51840	ProteinID:ONM05274.1	SEG:seg	UniParc:UPI000843006D
UniProt:A0A1D6KRC7	MapMan:35.2	:	:	:	:

Description

No Description!

Coordinates

chr1:-:229575751..229601780

Molecular Weight (calculated)

48832.6 Da

IEP (calculated)

9.500

GRAVY (calculated)

-0.539

Length

450 amino acids

Sequence
(BLAST)

001: MARRRTGAAV ADLRGCTGNG GTKQPPHARS HPRSPHPTAH PPRPPLAPPP PVAAATGRAR LAVRLALPPP PTRFSQPQAD AQPRAIVVAE VRWKGHRASA
101: LGSLRRAAVR RNRTWEDADA AWEEEFESVD TLAVASQREG VVFHPWELAF RVVSDINKGP KNKPSILGTT SLNLADYALT AGEIILSLSI TGGAPEQASS
201: LHLTLSMVEL RAFQETSNAS QRSAATLPLS PSSGDSLPGG KYEVLVIKAG LRKVKILTDL VSTRRPKKTC QGGGKDKLCV NSDGAEYPCD TESLDDDLDD
301: RVKEDEFGDS TIRKSFSYGS LQSDNYVGGL VYAHAKIVGE HEDRIYYSNR KTDVSFHVEK GLPSTTENGL LTAKRSILPW RKRKLSLRSL KAKGEPLLKK
401: AYGEEGGDDI EYDRRLLTSF DESVSEGSRG YGSANTMVSK FGDDNFVIGN

Best Arabidopsis Sequence Match ( AT3G11760.1 )
(BLAST)

001: MVVKMMKWRP WPPLVTRKYE VKLSVKKLEG WDLVREGVPE KDRLTVEIRW KGPKATLGSL RRSVKRNFTK EAVGESDVVS WEDEEFQSLC SLTSYKDSLF
101: YPWEITFSVF TNGMKQGQKN KAPVVGTAFL NLAEYACVTD KKEFDINIPL TLSACVASET HPLLFVSLSL LELRTTPETS DSAAQTAVVP LPLPSPSPQQ
201: PTETHSVEKE DVSAIKAGLR KVKIFTEFVS TRKAKKACRE EEGRFSSFES SESLDDFETD FDEGKEELMS MRKSFSYGPL SYANGVGTSL NCGAKVSDED
301: EDWVYYSHRK SDVGAGCSDA EDSAAGLVYE ASLLPRRSIL PWRKRKLSFR SPKSKGEPLL KKDNGEEGGD DIDFDRRQLS SDEAHPPFGS KIDEDSSANP
401: RTSFSEFGED SFAIGSWEEK EVISRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPIKSQFDSL IREGSLEWRN LCENETYMQK
501: FPDKHFDLDT VLQAKIRPLT VIPGKSFVGF FHPDGMINEG RFEFLQGAMS FDSIWAEIIS LEESSANGDS YDDDSPPHVY IVSWNDHFFV LKVEKEAYYI
601: IDTLGERLYE GCDQAYVLKF DHKTVIHKIL HTEEAGSESE PESEILSRGK ESCKEYIKNF LAAIPIRELQ EDIKKGLAST APVHHRLQIE FHYTTNAEIT
701: SL

Arabidopsis Description

F26K24.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.