Factsheet for Zm00001d041287_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG24034	Sorghum	mitochondrion	91.66	91.42
TraesCS5B01G026400.1	Wheat	mitochondrion	68.93	72.76
TraesCS5A01G027200.1	Wheat	mitochondrion	69.32	72.39
Os12t0620600-01	Rice	mitochondrion	69.83	72.24
TraesCS5D01G035100.1	Wheat	mitochondrion	68.81	72.04
HORVU5Hr1G007680.4	Barley	mitochondrion	67.78	68.31
Zm00001d033510_P001	Maize	mitochondrion	64.96	66.23
Zm00001d021933_P001	Maize	cytosol	29.52	63.54
PGSC0003DMT400005067	Potato	cytosol	19.9	56.57
GSMUA_Achr5P02610_001	Banana	mitochondrion	51.35	56.5
GSMUA_Achr2P12860_001	Banana	mitochondrion	50.96	54.83
GSMUA_Achr6P31090_001	Banana	mitochondrion	48.91	53.44
VIT_08s0032g01040.t01	Wine grape	mitochondrion, nucleus	50.19	52.13
CDY71046	Canola	cytosol	38.38	51.55
KRH72142	Soybean	mitochondrion	49.42	50.06
KRH32877	Soybean	mitochondrion	49.29	49.94
Zm00001d032528_P001	Maize	plastid	28.37	49.11
CDY47916	Canola	mitochondrion, nucleus	43.39	48.63
Bra038679.1-P	Field mustard	cytosol	43.26	48.42
GSMUA_Achr4P31330_001	Banana	mitochondrion	52.37	48.4
PGSC0003DMT400036595	Potato	nucleus, plastid	21.82	48.3
KRG96284	Soybean	mitochondrion	46.34	47.81
AT3G11760.1	Thale cress	nucleus	43.0	47.72
PGSC0003DMT400055068	Potato	mitochondrion	46.34	47.19
Solyc01g006890.2.1	Tomato	mitochondrion	46.34	47.19
KRH68026	Soybean	mitochondrion	37.36	47.16
KRH34623	Soybean	cytosol, extracellular, nucleus	42.36	46.48
PGSC0003DMT400065418	Potato	extracellular, golgi	43.52	44.37
Solyc11g006410.1.1	Tomato	nucleus	43.0	43.91
CDX70194	Canola	extracellular, vacuole	38.51	41.78
AT2G10560.1	Thale cress	nucleus	14.89	41.73
Bra009421.1-P	Field mustard	endoplasmic reticulum, extracellular	38.77	40.98
CDX98789	Canola	endoplasmic reticulum, extracellular	38.51	40.76
AT5G04860.1	Thale cress	endoplasmic reticulum, extracellular	38.64	38.49
KRH07454	Soybean	endoplasmic reticulum	7.83	31.77
Zm00001d039472_P001	Maize	mitochondrion	18.23	30.02
Zm00001d008799_P001	Maize	mitochondrion, plastid	17.2	29.19
Solyc04g009790.2.1	Tomato	extracellular, golgi, plasma membrane	43.39	26.93
PGSC0003DMT400056835	Potato	cytosol, nucleus	12.58	23.56

Protein Annotations

EnsemblPlants:Zm00001d041287_P001	EnsemblPlants:Zm00001d041287_T001	EnsemblPlantsGene:Zm00001d041287	EntrezGene:103650272	InterPro:IPR019448	InterPro:NT-C2
PANTHER:PTHR31182	PANTHER:PTHR31182:SF6	PFAM:PF10358	PFscan:PS51840	ProteinID:ONM32785.1	SEG:seg
UniParc:UPI0004DE8076	UniProt:A0A1D6MVE3	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr3:+:110465002..110469594

Molecular Weight (calculated)

85774.4 Da

IEP (calculated)

5.104

GRAVY (calculated)

-0.461

Length

779 amino acids

Sequence
(BLAST)

001: MVARMMRWPR PPPARNIRVR LVVRRAEGLP PPPAPLSPDG SPGPEAEAKA FVEVSWKGPK MSPLSSLRRA QRPPRNQTRK EALPAVAAAA LEDGAAAAPA
101: LAVSAVAWDE EFERDAALTA TSHREPAAFH PWDVTFSVVS ESNKISKSKL VLGTASLNLA DYASAAEEEI EIILPLSVPS SATDLVPSLH LTLSLAEVRT
201: SQQSPGASQR SVIAPLSPSS GDSLASGKDE VSVIKVGLRN LKMLRDLVST RRFKKTNQDF DGSEKYYVHS DGAEFSCDTD SLDDDLDDRE HDDEFGGSAV
301: RKSFSYGSLQ TMNVGALLYA PRIDGDDEGW VHYSHRNSDV GYHVEQVPPP TAEEHASIPL RRKRSILPAR WRKVKLPKAK GEPLLKPYGE EGGDDIDYDR
401: RLLTPSDGSV SEGSNGSNSM VSVFGDDDFV VGNWESKEVF SRDGHLKLST QVFFASIDQR SERAAGESAC TALVAVVADW FQTNQDLMPI RSQFDNLIRE
501: GSLEWRRLCE NETYRERFPD KHFDLETVLH AKIRPLTVAH SKSFIGFFHP QGTEDVTGFD FLDGAMSFDN IWDEISRAAE CSSGKPALYI VSWNDHFFVL
601: KVDANAIYII DTLGERLSEG CNQAYILKFD DTTTIHKTPA EKKEPSPDHR GRRKDSSETC STEQGSGSDT EECEPVLKGK DACKEYIKSF LAAIPIRELQ
701: ADIKKGLMAS TPLHHRLQIE FHYTEPRPAE IAAPSPLPPF EAPFEFCWPE PPSPPAATES TVTHPPAMEA GITQAVAVV

Best Arabidopsis Sequence Match ( AT3G11760.1 )
(BLAST)

001: MVVKMMKWRP WPPLVTRKYE VKLSVKKLEG WDLVREGVPE KDRLTVEIRW KGPKATLGSL RRSVKRNFTK EAVGESDVVS WEDEEFQSLC SLTSYKDSLF
101: YPWEITFSVF TNGMKQGQKN KAPVVGTAFL NLAEYACVTD KKEFDINIPL TLSACVASET HPLLFVSLSL LELRTTPETS DSAAQTAVVP LPLPSPSPQQ
201: PTETHSVEKE DVSAIKAGLR KVKIFTEFVS TRKAKKACRE EEGRFSSFES SESLDDFETD FDEGKEELMS MRKSFSYGPL SYANGVGTSL NCGAKVSDED
301: EDWVYYSHRK SDVGAGCSDA EDSAAGLVYE ASLLPRRSIL PWRKRKLSFR SPKSKGEPLL KKDNGEEGGD DIDFDRRQLS SDEAHPPFGS KIDEDSSANP
401: RTSFSEFGED SFAIGSWEEK EVISRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPIKSQFDSL IREGSLEWRN LCENETYMQK
501: FPDKHFDLDT VLQAKIRPLT VIPGKSFVGF FHPDGMINEG RFEFLQGAMS FDSIWAEIIS LEESSANGDS YDDDSPPHVY IVSWNDHFFV LKVEKEAYYI
601: IDTLGERLYE GCDQAYVLKF DHKTVIHKIL HTEEAGSESE PESEILSRGK ESCKEYIKNF LAAIPIRELQ EDIKKGLAST APVHHRLQIE FHYTTNAEIT
701: SL

Arabidopsis Description

F26K24.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.