Factsheet for GSMUA_Achr5P02610_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P12860_001	Banana	mitochondrion	76.69	75.0
GSMUA_Achr4P31330_001	Banana	mitochondrion	77.4	65.01
GSMUA_Achr6P31090_001	Banana	mitochondrion	64.12	63.67
VIT_08s0032g01040.t01	Wine grape	mitochondrion, nucleus	60.73	57.33
KRH68026	Soybean	mitochondrion	49.29	56.56
PGSC0003DMT400005067	Potato	cytosol	21.75	56.2
CDY71046	Canola	cytosol	45.48	55.52
Zm00001d033510_P001	Maize	mitochondrion	59.89	55.5
KXG37933	Sorghum	mitochondrion	60.31	55.45
TraesCS5D01G381300.1	Wheat	mitochondrion	57.77	55.35
Os12t0620600-01	Rice	mitochondrion	58.62	55.11
Os03t0649000-01	Rice	mitochondrion	60.73	54.85
TraesCS5A01G371800.1	Wheat	mitochondrion	57.34	54.79
Zm00001d021933_P001	Maize	cytosol	27.97	54.7
TraesCS5B01G373900.1	Wheat	mitochondrion	56.92	54.39
TraesCS5B01G026400.1	Wheat	mitochondrion	56.64	54.34
TraesCS5A01G027200.1	Wheat	mitochondrion	57.06	54.16
KRH32877	Soybean	mitochondrion	58.76	54.1
TraesCS5D01G035100.1	Wheat	mitochondrion	56.78	54.03
PGSC0003DMT400036595	Potato	nucleus, plastid	26.69	53.69
CDY47916	Canola	mitochondrion, nucleus	52.68	53.67
Bra038679.1-P	Field mustard	cytosol	52.68	53.59
KRH72142	Soybean	mitochondrion	58.19	53.58
KRG96284	Soybean	mitochondrion	56.92	53.38
AT3G11760.1	Thale cress	nucleus	52.82	53.28
PGSC0003DMT400055068	Potato	mitochondrion	57.34	53.07
Solyc01g006890.2.1	Tomato	mitochondrion	56.36	52.16
KXG24034	Sorghum	mitochondrion	57.34	51.98
HORVU5Hr1G092510.5	Barley	mitochondrion	56.21	51.69
HORVU5Hr1G007680.4	Barley	mitochondrion	56.07	51.36
Zm00001d041287_P001	Maize	mitochondrion	56.5	51.35
KRH34623	Soybean	cytosol, extracellular, nucleus	50.14	50.0
GSMUA_Achr8P04760_001	Banana	mitochondrion	54.8	49.94
Solyc11g006410.1.1	Tomato	nucleus	50.85	47.18
PGSC0003DMT400065418	Potato	extracellular, golgi	50.56	46.86
CDX70194	Canola	extracellular, vacuole	46.19	45.54
Bra009421.1-P	Field mustard	endoplasmic reticulum, extracellular	46.19	44.37
CDX98789	Canola	endoplasmic reticulum, extracellular	45.62	43.89
GSMUA_Achr8P17400_001	Banana	mitochondrion	26.55	42.63
AT5G04860.1	Thale cress	endoplasmic reticulum, extracellular	46.19	41.82
AT2G10560.1	Thale cress	nucleus	16.38	41.73
Zm00001d032528_P001	Maize	plastid	26.41	41.56
KRH07454	Soybean	endoplasmic reticulum	9.75	35.94
GSMUA_Achr8P26590_001	Banana	mitochondrion	57.2	34.79
GSMUA_Achr5P06470_001	Banana	nucleus	22.03	33.05
Solyc04g009790.2.1	Tomato	extracellular, golgi, plasma membrane	50.71	28.61
PGSC0003DMT400056835	Potato	cytosol, nucleus	15.4	26.2

Protein Annotations

EnsemblPlants:GSMUA_Achr5P02610_001	EnsemblPlants:GSMUA_Achr5T02610_001	EnsemblPlantsGene:GSMUA_Achr5G02610_001	InterPro:IPR019448	InterPro:NT-C2	PANTHER:PTHR31182
PANTHER:PTHR31182:SF2	PFAM:PF10358	PFscan:PS51840	SEG:seg	UniParc:UPI000295F40B	UniProt:M0SV40
MapMan:35.2	:	:	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr5G02610_001]

Coordinates

chr5:-:1690938..1695384

Molecular Weight (calculated)

79938.1 Da

IEP (calculated)

5.087

GRAVY (calculated)

-0.458

Length

708 amino acids

Sequence
(BLAST)

001: MVSRMMRWRP WPPLLSKKFR VRLVVRRVEG VSGGDEVART GRKVAVEVRW KGPKLALSSL RRTARRNRTR EEEVGDGGLV EWNEEFETVC TLTPHKESSF
101: QPWEITFIVL NGLNHGAKNK ESVLGMASLN IVEFTSTAEQ ETELNLPLLL PGVTESHLSL YLALSILELR SSQFSSDMIQ RSLTSPLSPP FGDVLPSEKD
201: ELSALKAGLR KVKILTEFVS TLKTKKTCQD DDGSEGKCSA RSDDAEYTYP SDLDSPDDDL DELDDTEEDS SMRKSFSYGT LQSVNKIGHG TRIDNGVYED
301: LVCYNHRRSD IGCSHVEDTM LFVPDLSVLK RRILPWKKRK LSFRSPKPKG EPLLKKAYEE GGDDIDYDRR QLSSDESLAG RREGDDDSPL NRSSVSDFGD
401: DYFVIGNWET KELVSRDGHM KLVTQVFFAS IDQRSERACG ESACTALVAV IADWFHRNQD MMPLKSQFDS LIREGSLEWR NLCENQAYQE HFPDKHFDLE
501: TVLQAKIRPI SVVPSKSFIG FFHPDTPDSN SGFDFLHGAM SFDSIWDEIS RSECLSDGRP MLYIVSWNDH FFVLKVEHDA YYILDTLGER LYEGCQQAYI
601: LKFDDSTSIH KVPSDSKTVN GEATASCKEY IKSFLAAIPI RELQADIKKG RVSSTPLHHR LQIEFHYTES SDELSLSNLS SAANAVPELS WLIEPAVAFT
701: STPAVLVA

Best Arabidopsis Sequence Match ( AT3G11760.1 )
(BLAST)

001: MVVKMMKWRP WPPLVTRKYE VKLSVKKLEG WDLVREGVPE KDRLTVEIRW KGPKATLGSL RRSVKRNFTK EAVGESDVVS WEDEEFQSLC SLTSYKDSLF
101: YPWEITFSVF TNGMKQGQKN KAPVVGTAFL NLAEYACVTD KKEFDINIPL TLSACVASET HPLLFVSLSL LELRTTPETS DSAAQTAVVP LPLPSPSPQQ
201: PTETHSVEKE DVSAIKAGLR KVKIFTEFVS TRKAKKACRE EEGRFSSFES SESLDDFETD FDEGKEELMS MRKSFSYGPL SYANGVGTSL NCGAKVSDED
301: EDWVYYSHRK SDVGAGCSDA EDSAAGLVYE ASLLPRRSIL PWRKRKLSFR SPKSKGEPLL KKDNGEEGGD DIDFDRRQLS SDEAHPPFGS KIDEDSSANP
401: RTSFSEFGED SFAIGSWEEK EVISRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPIKSQFDSL IREGSLEWRN LCENETYMQK
501: FPDKHFDLDT VLQAKIRPLT VIPGKSFVGF FHPDGMINEG RFEFLQGAMS FDSIWAEIIS LEESSANGDS YDDDSPPHVY IVSWNDHFFV LKVEKEAYYI
601: IDTLGERLYE GCDQAYVLKF DHKTVIHKIL HTEEAGSESE PESEILSRGK ESCKEYIKNF LAAIPIRELQ EDIKKGLAST APVHHRLQIE FHYTTNAEIT
701: SL

Arabidopsis Description

F26K24.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.