Factsheet for Os12t0620600-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G035100.1	Wheat	mitochondrion	77.42	78.36
TraesCS5A01G027200.1	Wheat	mitochondrion	77.16	77.88
TraesCS5B01G026400.1	Wheat	mitochondrion	75.7	77.24
KXG24034	Sorghum	mitochondrion	75.43	72.73
HORVU5Hr1G007680.4	Barley	mitochondrion	74.1	72.19
Os03t0649000-01	Rice	mitochondrion	72.78	69.9
Zm00001d041287_P001	Maize	mitochondrion	72.24	69.83
GSMUA_Achr5P02610_001	Banana	mitochondrion	55.11	58.62
PGSC0003DMT400005067	Potato	cytosol	21.25	58.39
GSMUA_Achr2P12860_001	Banana	mitochondrion	55.51	57.73
GSMUA_Achr6P31090_001	Banana	mitochondrion	52.86	55.82
CDY71046	Canola	cytosol	40.5	52.59
VIT_08s0032g01040.t01	Wine grape	mitochondrion, nucleus	52.32	52.53
KRH32877	Soybean	mitochondrion	51.79	50.72
CDY47916	Canola	mitochondrion, nucleus	46.61	50.5
KRG96284	Soybean	mitochondrion	50.6	50.46
KRH72142	Soybean	mitochondrion	51.53	50.46
GSMUA_Achr4P31330_001	Banana	mitochondrion	56.31	50.3
Bra038679.1-P	Field mustard	cytosol	46.48	50.29
AT3G11760.1	Thale cress	nucleus	45.95	49.29
PGSC0003DMT400055068	Potato	mitochondrion	49.67	48.89
Solyc01g006890.2.1	Tomato	mitochondrion	49.67	48.89
KRH68026	Soybean	mitochondrion	39.97	48.78
KRH34623	Soybean	cytosol, extracellular, nucleus	45.42	48.17
PGSC0003DMT400036595	Potato	nucleus, plastid	22.31	47.73
Solyc11g006410.1.1	Tomato	nucleus	45.42	44.82
CDX70194	Canola	extracellular, vacuole	42.36	44.43
CDX98789	Canola	endoplasmic reticulum, extracellular	43.16	44.16
PGSC0003DMT400065418	Potato	extracellular, golgi	44.62	43.98
Bra009421.1-P	Field mustard	endoplasmic reticulum, extracellular	42.5	43.42
AT2G10560.1	Thale cress	nucleus	15.94	43.17
AT5G04860.1	Thale cress	endoplasmic reticulum, extracellular	42.5	40.92
Os01t0194000-01	Rice	cytosol	24.17	37.68
KRH07454	Soybean	endoplasmic reticulum	8.63	33.85
Solyc04g009790.2.1	Tomato	extracellular, golgi, plasma membrane	45.42	27.25
PGSC0003DMT400056835	Potato	cytosol, nucleus	13.15	23.8

Protein Annotations

EMBL:AK119567	EnsemblPlants:Os12t0620600-01	EnsemblPlantsGene:Os12g0620600	EntrezGene:4352816	InterPro:IPR019448	InterPro:NT-C2
PANTHER:PTHR31182	PANTHER:PTHR31182:SF6	PFAM:PF10358	PFscan:PS51840	ProteinID:ABA99899.1	ProteinID:BAF30316.1
ProteinID:BAT18133.1	RefSeq:XP_015620604.1	SEG:seg	UniParc:UPI0000680BFA	UniProt:Q2QM21	MapMan:35.2

Description

Conserved hypothetical protein. (Os12t0620600-01)

Coordinates

chr12:-:26433354..26437997

Molecular Weight (calculated)

83247.9 Da

IEP (calculated)

4.771

GRAVY (calculated)

-0.486

Length

753 amino acids

Sequence
(BLAST)

001: MVARMWPWPP PARKFRVRLV VRRAEGLTAT ATATASSSPV AEAKVAVEVR WKGPKASPLG SLRRVMHSNR TRLESAAEAA VAWEEEFERV ETFTATSHRK
101: SGAAFHPWDL AFSVFVNDSN KGPKGELILG TASLNLAEYT SASEEVEIIL PLSVPNGSSE SSPSLHLTLS LVELGPPHQS PDASQRSAVT APLSPSSGDS
201: VPSSKDEVSS VIKAGLRNLK ILTDLVSTRR SKKTNRDDDG SEDKCYVHSD GAEYPSDTDS LDEDLDDRER DDGLGGSTVR KSFSYGSLQS VNYAGGLLYA
301: HARIDGEHED WIYYSHRKSE AGYSVEQEAS STAEEPVVSV SRRSLLPWKK KRKLNLRLLK VLKNKGEPLL KKGNDEEGGD DIDYDRRLLT TSDGNALEGS
401: DSSINSMVSI FGDDNFVVGN WESKEVLSRD GHLRLSTQVF FASIDQRSER AAGESACTAL VAVIADWFEA NQDLMPIRSQ FDSLIREGSL EWRKLCENET
501: YRERFPDKHF DLETVLHAKI RPLTVSPNRS FIGFFQPEST EDGSGFDFLD GAMSFDNIWD EISRAAECST EKPTLYIVSW NDHFFVLKVE AGAYYIIDTL
601: GERLYEGCSQ AYILKFDDNT TIHKVPAEKK EANPDSSGRL KDSSDSSSTD QDSGTDTEEC ELVSKGKESC KEYIKSFLAA IPIRELQADI KKGIIASTPL
701: HHRLQIEFHY TESCPEEIPL PAPLPAIEAP FEFSWPEPPP AMEVTLAPAV AAI

Best Arabidopsis Sequence Match ( AT3G11760.1 )
(BLAST)

001: MVVKMMKWRP WPPLVTRKYE VKLSVKKLEG WDLVREGVPE KDRLTVEIRW KGPKATLGSL RRSVKRNFTK EAVGESDVVS WEDEEFQSLC SLTSYKDSLF
101: YPWEITFSVF TNGMKQGQKN KAPVVGTAFL NLAEYACVTD KKEFDINIPL TLSACVASET HPLLFVSLSL LELRTTPETS DSAAQTAVVP LPLPSPSPQQ
201: PTETHSVEKE DVSAIKAGLR KVKIFTEFVS TRKAKKACRE EEGRFSSFES SESLDDFETD FDEGKEELMS MRKSFSYGPL SYANGVGTSL NCGAKVSDED
301: EDWVYYSHRK SDVGAGCSDA EDSAAGLVYE ASLLPRRSIL PWRKRKLSFR SPKSKGEPLL KKDNGEEGGD DIDFDRRQLS SDEAHPPFGS KIDEDSSANP
401: RTSFSEFGED SFAIGSWEEK EVISRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPIKSQFDSL IREGSLEWRN LCENETYMQK
501: FPDKHFDLDT VLQAKIRPLT VIPGKSFVGF FHPDGMINEG RFEFLQGAMS FDSIWAEIIS LEESSANGDS YDDDSPPHVY IVSWNDHFFV LKVEKEAYYI
601: IDTLGERLYE GCDQAYVLKF DHKTVIHKIL HTEEAGSESE PESEILSRGK ESCKEYIKNF LAAIPIRELQ EDIKKGLAST APVHHRLQIE FHYTTNAEIT
701: SL

Arabidopsis Description

F26K24.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.