Factsheet for Solyc11g006410.1.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
mitochondrion 3
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400005067	Potato	cytosol	33.03	91.97
PGSC0003DMT400036595	Potato	nucleus, plastid	40.37	87.5
Solyc01g006890.2.1	Tomato	mitochondrion	52.29	52.16
KRH34623	Soybean	cytosol, extracellular, nucleus	48.23	51.83
GSMUA_Achr2P12860_001	Banana	mitochondrion	48.75	51.38
GSMUA_Achr5P02610_001	Banana	mitochondrion	47.18	50.85
GSMUA_Achr6P31090_001	Banana	mitochondrion	46.79	50.07
TraesCS5D01G381300.1	Wheat	mitochondrion	46.26	47.77
TraesCS5A01G371800.1	Wheat	mitochondrion	46.26	47.64
Os03t0649000-01	Rice	mitochondrion	48.89	47.58
TraesCS5B01G026400.1	Wheat	mitochondrion	45.48	47.02
KXG37933	Sorghum	mitochondrion	47.31	46.88
Zm00001d033510_P001	Maize	mitochondrion	46.79	46.73
Zm00001d021933_P001	Maize	cytosol	22.15	46.69
TraesCS5B01G373900.1	Wheat	mitochondrion	45.22	46.56
TraesCS5A01G027200.1	Wheat	mitochondrion	45.48	46.51
TraesCS5D01G035100.1	Wheat	mitochondrion	45.22	46.37
Os12t0620600-01	Rice	mitochondrion	44.82	45.42
CDX98789	Canola	endoplasmic reticulum, extracellular	43.64	45.24
CDX70194	Canola	extracellular, vacuole	42.07	44.71
HORVU5Hr1G092510.5	Barley	mitochondrion	45.09	44.68
Bra009421.1-P	Field mustard	endoplasmic reticulum, extracellular	42.99	44.5
HORVU5Hr1G007680.4	Barley	mitochondrion	45.09	44.5
KXG24034	Sorghum	mitochondrion	44.82	43.79
GSMUA_Achr8P04760_001	Banana	mitochondrion	44.3	43.5
Zm00001d041287_P001	Maize	mitochondrion	43.91	43.0
AT5G04860.1	Thale cress	endoplasmic reticulum, extracellular	43.91	42.84
GSMUA_Achr4P31330_001	Banana	mitochondrion	47.18	42.7
AT2G10560.1	Thale cress	nucleus	15.2	41.73
Solyc04g009790.2.1	Tomato	extracellular, golgi, plasma membrane	67.37	40.96
PGSC0003DMT400056835	Potato	cytosol, nucleus	21.76	39.9
Solyc08g059710.2.1	Tomato	nucleus	25.56	34.95
KRH07454	Soybean	endoplasmic reticulum	8.65	34.38
Zm00001d032528_P001	Maize	plastid	18.87	32.0
GSMUA_Achr8P26590_001	Banana	mitochondrion	46.13	30.24

Protein Annotations

EnsemblPlants:Solyc11g006410.1.1	EnsemblPlantsGene:Solyc11g006410.1	InterPro:IPR019448	InterPro:NT-C2	PANTHER:PTHR31182	PANTHER:PTHR31182:SF2
PFAM:PF10358	PFscan:PS51840	SEG:seg	UniParc:UPI0002769DCD	UniProt:K4D4Q4	MapMan:35.2

Description

No Description!

Coordinates

chr11:+:1122705..1126488

Molecular Weight (calculated)

86255.7 Da

IEP (calculated)

5.072

GRAVY (calculated)

-0.648

Length

763 amino acids

Sequence
(BLAST)

001: MVVKMMKWRP WPEIASKKFE AKITVNCVKG LNFSQDFQRL VVEIKWKGSK GNSLTLSSLK RKNVKKSFTK EESLKDDGVV YWNEEFQSLC NFNVSKEIAF
101: HPWEVSFTVF NVTNKRSNHK VPKVAAASLN IADFASEARE KEEIEIVIPL EAYSGGNKNN LSLCLSLNLV ELGNAQEASE TMPKFVMSAP VSPSPAEVSS
201: TDRNELSALK AGLQKVKFFK GLSTMRRKKA CHEEEGSDGR NSVRSDDTDL VYPVDTDSLG DSEEGESDEV KEDTSLRKSF SYETLAYAKH AGGSCYTNTS
301: GSEDDDLIFY SHHKSVARRV YAEGATGEGH NQYSQQISKR KILPWKKRNL SFRSPKPKGE PLLKKHYGEE GGDDIDFDRR QLSSSDESSS GWNKSEESST
401: ANEFSVSEFG EDSFAVGSWE QKEIVSRDGQ MKLQTEVFFA SIDQRNERAA GESACTALVA VIADWFHSNP EEMPIKSQLD SLIREGSLEW RNLCENKTYR
501: ERFPDKHFDL ETVVQAKVRP LSVVPEKSFI GFFHPEGIED EGFDFLKDAM SFDNIWDEIS KSVQDSPSHG ECFVYIVSWN DHFFILKVER DAYYIIDTLG
601: ERLYEGCNQA FILKFDRDTT ILQLPNTSQQ SDEKPASTKK EQTDKKQAAS NEGKIVSNNT KEKMEESVVS FRDKVPENED ETSLVCKGKE ACKQYIKSFL
701: AAIPIRELQV DVKKGLMAST PLHQRLQIEF HYTKSFNTQL ELESPSEELT DNSLALPMSA AVE

Best Arabidopsis Sequence Match ( AT3G11760.1 )
(BLAST)

001: MVVKMMKWRP WPPLVTRKYE VKLSVKKLEG WDLVREGVPE KDRLTVEIRW KGPKATLGSL RRSVKRNFTK EAVGESDVVS WEDEEFQSLC SLTSYKDSLF
101: YPWEITFSVF TNGMKQGQKN KAPVVGTAFL NLAEYACVTD KKEFDINIPL TLSACVASET HPLLFVSLSL LELRTTPETS DSAAQTAVVP LPLPSPSPQQ
201: PTETHSVEKE DVSAIKAGLR KVKIFTEFVS TRKAKKACRE EEGRFSSFES SESLDDFETD FDEGKEELMS MRKSFSYGPL SYANGVGTSL NCGAKVSDED
301: EDWVYYSHRK SDVGAGCSDA EDSAAGLVYE ASLLPRRSIL PWRKRKLSFR SPKSKGEPLL KKDNGEEGGD DIDFDRRQLS SDEAHPPFGS KIDEDSSANP
401: RTSFSEFGED SFAIGSWEEK EVISRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPIKSQFDSL IREGSLEWRN LCENETYMQK
501: FPDKHFDLDT VLQAKIRPLT VIPGKSFVGF FHPDGMINEG RFEFLQGAMS FDSIWAEIIS LEESSANGDS YDDDSPPHVY IVSWNDHFFV LKVEKEAYYI
601: IDTLGERLYE GCDQAYVLKF DHKTVIHKIL HTEEAGSESE PESEILSRGK ESCKEYIKNF LAAIPIRELQ EDIKKGLAST APVHHRLQIE FHYTTNAEIT
701: SL

Arabidopsis Description

F26K24.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.