Factsheet for GSMUA_Achr8P26590_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 4
mitochondrion 5

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P04760_001	Banana	mitochondrion	42.01	62.93
GSMUA_Achr2P12860_001	Banana	mitochondrion	36.17	58.15
GSMUA_Achr5P02610_001	Banana	mitochondrion	34.79	57.2
GSMUA_Achr6P31090_001	Banana	mitochondrion	34.19	55.82
PGSC0003DMT400005067	Potato	cytosol	13.06	55.47
VIT_08s0032g01040.t01	Wine grape	mitochondrion, nucleus	34.71	53.87
CDY71046	Canola	cytosol	26.46	53.1
KRH68026	Soybean	mitochondrion	27.75	52.35
KRH32877	Soybean	mitochondrion	34.36	52.02
KRG96284	Soybean	mitochondrion	33.68	51.92
KRH72142	Soybean	mitochondrion	34.28	51.89
Bra038679.1-P	Field mustard	cytosol	30.76	51.44
CDY47916	Canola	mitochondrion, nucleus	30.67	51.37
PGSC0003DMT400055068	Potato	mitochondrion	33.16	50.46
Solyc01g006890.2.1	Tomato	mitochondrion	33.08	50.33
GSMUA_Achr4P31330_001	Banana	mitochondrion	36.43	50.3
PGSC0003DMT400036595	Potato	nucleus, plastid	15.12	50.0
AT3G11760.1	Thale cress	nucleus	30.15	50.0
KRH34623	Soybean	cytosol, extracellular, nucleus	29.64	48.59
PGSC0003DMT400065418	Potato	extracellular, golgi	31.19	47.51
Solyc11g006410.1.1	Tomato	nucleus	30.24	46.13
GSMUA_Achr8P17400_001	Banana	mitochondrion	16.49	43.54
CDX70194	Canola	extracellular, vacuole	26.72	43.31
CDX98789	Canola	endoplasmic reticulum, extracellular	27.06	42.8
Bra009421.1-P	Field mustard	endoplasmic reticulum, extracellular	26.89	42.47
AT2G10560.1	Thale cress	nucleus	10.14	42.45
AT5G04860.1	Thale cress	endoplasmic reticulum, extracellular	27.49	40.92
GSMUA_Achr5P06470_001	Banana	nucleus	14.18	34.96
KRH07454	Soybean	endoplasmic reticulum	5.33	32.29
Solyc04g009790.2.1	Tomato	extracellular, golgi, plasma membrane	32.73	30.36
PGSC0003DMT400056835	Potato	cytosol, nucleus	9.11	25.48

Protein Annotations

EnsemblPlants:GSMUA_Achr8P26590_001	EnsemblPlants:GSMUA_Achr8T26590_001	EnsemblPlantsGene:GSMUA_Achr8G26590_001	InterPro:IPR019448	InterPro:NT-C2	InterPro:Znf-4CXXC_R1
ncoils:Coil	PANTHER:PTHR31182	PANTHER:PTHR31182:SF2	PFAM:PF10358	PFAM:PF10497	PFscan:PS51840
SEG:seg	UniParc:UPI000296114C	UniProt:M0TTW2	MapMan:35.2	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G26590_001]

Coordinates

chr8:-:30092015..30101167

Molecular Weight (calculated)

131445.0 Da

IEP (calculated)

6.211

GRAVY (calculated)

-0.567

Length

1164 amino acids

Sequence
(BLAST)

0001: MVARMMRWRP WSLLQSKRYE MRLVVRRIEG LPETGSGLGS RAAAVAEVRW KGSKTPLSSL RRGGVRRNRT REEEVREGGV VEWDEEFLTA CTLSAHKENG
0101: AFLPWEIAFA VFMGLGEGPK IKACMIGMAS VNLAEFAPTA EQKEMEIDVP LLPMGIPTES QPTLYIALNL LELRTIQEQT EAVQSSIVPV PSSPPLGDAF
0201: PCEKDEPHTL KSGLRKVNIL KALALSRKAK KAYQEDYGNE EKCSPRNDDA EHAYPCNTDS LDDVENVEEN KDGFSERKSF SYGTLASANY IEGSFYSDMM
0301: TNTDYDDLVY YSHQKSDVSY SDVEDAPSIS IPEHPVYFVS KRSIIPWKKT RLNFRSPKAK GEPLLKKSYG EEGGDDIDFD RRQLCSVGGL TCAVNWYDNS
0401: VANCPAVSNF GDDNFVVGSW ELKEVISRDG SLKLCTQAFL ASIDQRSEQA SGESACTVLV AVIADWFQAN PHMMPIKSQF DNLIREGSLD WRTLCKNQTY
0501: REHFPDKHFD LETVLEAKIR PLSIVPAKSF VGFFHPEGTD DSDSFNFLHG AMSFDNIWDE INRTKPEYSS DCGPHIYIVS WNDHFFILKV EHDAYYIIDT
0601: LGERLHEGCN QAYILKFDDT TTIHKHKNES RPACGNQDIR DANMEDELIC RGQESCKEYI KSFLAAIPVR ELQVDLRKGL TTSTLIHHRL QIEFHYTELS
0701: KEVMAKLFQP ASELHLAVSD SEFLCPVESV FEASPSSPPP PPISSGAATP DAYEKVRDER IRENMERLQK LGILDLSLRL KSHLQHASSS APSYHHRRKR
0801: DTTTGTTSGQ KPPMQPPRRS SRCVFFHHQF AGGINCDSDH LTPACCPLQH ITPVSYAEIP IKKDVGSELN GSISIEEGAK EEIYTDEHEK LLGKCETTWN
0901: LFVDGYGNDG RRIYDQIRGK TCHQCRQKTL GHRTHCSKCK IVQGQFCGDC LFMRYGENVL EAIKNPNWIC PVCRGICNCS FCRIKKGWGP TGPLYRKIAS
1001: MGYKSVAHYL IQSRRQQTSS GDLNSSESVS AEDSSNINAD FYGENSKMPS TINLGSNIKK KNESFPEEEN EPLSDKENES LPENGVRSSD DYSAEDTAEK
1101: SPTKLRSKIK KKNESCDDIK PIHDKVDNSA FYSHNFRIRN ILLDLSKYIW ASLCWNLMMF GFRN

Best Arabidopsis Sequence Match ( AT3G11760.1 )
(BLAST)

001: MVVKMMKWRP WPPLVTRKYE VKLSVKKLEG WDLVREGVPE KDRLTVEIRW KGPKATLGSL RRSVKRNFTK EAVGESDVVS WEDEEFQSLC SLTSYKDSLF
101: YPWEITFSVF TNGMKQGQKN KAPVVGTAFL NLAEYACVTD KKEFDINIPL TLSACVASET HPLLFVSLSL LELRTTPETS DSAAQTAVVP LPLPSPSPQQ
201: PTETHSVEKE DVSAIKAGLR KVKIFTEFVS TRKAKKACRE EEGRFSSFES SESLDDFETD FDEGKEELMS MRKSFSYGPL SYANGVGTSL NCGAKVSDED
301: EDWVYYSHRK SDVGAGCSDA EDSAAGLVYE ASLLPRRSIL PWRKRKLSFR SPKSKGEPLL KKDNGEEGGD DIDFDRRQLS SDEAHPPFGS KIDEDSSANP
401: RTSFSEFGED SFAIGSWEEK EVISRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPIKSQFDSL IREGSLEWRN LCENETYMQK
501: FPDKHFDLDT VLQAKIRPLT VIPGKSFVGF FHPDGMINEG RFEFLQGAMS FDSIWAEIIS LEESSANGDS YDDDSPPHVY IVSWNDHFFV LKVEKEAYYI
601: IDTLGERLYE GCDQAYVLKF DHKTVIHKIL HTEEAGSESE PESEILSRGK ESCKEYIKNF LAAIPIRELQ EDIKKGLAST APVHHRLQIE FHYTTNAEIT
701: SL

Arabidopsis Description

F26K24.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.