Factsheet for GSMUA_Achr8P04760_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 3
mitochondrion 5
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P02610_001	Banana	mitochondrion	49.94	54.8
PGSC0003DMT400005067	Potato	cytosol	19.3	54.74
GSMUA_Achr2P12860_001	Banana	mitochondrion	49.81	53.45
GSMUA_Achr6P31090_001	Banana	mitochondrion	48.39	52.73
VIT_08s0032g01040.t01	Wine grape	mitochondrion, nucleus	48.65	50.4
CDY71046	Canola	cytosol	37.32	50.0
KRG96284	Soybean	mitochondrion	48.01	49.4
Bra038679.1-P	Field mustard	cytosol	43.76	48.85
CDY47916	Canola	mitochondrion, nucleus	43.63	48.78
KRH32877	Soybean	mitochondrion	48.01	48.5
KRH72142	Soybean	mitochondrion	47.88	48.37
KRH68026	Soybean	mitochondrion	38.1	47.97
PGSC0003DMT400036595	Potato	nucleus, plastid	21.36	47.16
AT3G11760.1	Thale cress	nucleus	42.6	47.15
PGSC0003DMT400055068	Potato	mitochondrion	45.56	46.27
GSMUA_Achr4P31330_001	Banana	mitochondrion	50.19	46.26
PGSC0003DMT400065418	Potato	extracellular, golgi	45.17	45.94
KRH34623	Soybean	cytosol, extracellular, nucleus	41.83	45.77
Solyc01g006890.2.1	Tomato	mitochondrion	45.05	45.75
Solyc11g006410.1.1	Tomato	nucleus	43.5	44.3
GSMUA_Achr8P26590_001	Banana	mitochondrion	62.93	42.01
GSMUA_Achr8P17400_001	Banana	mitochondrion	23.55	41.5
CDX70194	Canola	extracellular, vacuole	37.58	40.67
CDX98789	Canola	endoplasmic reticulum, extracellular	37.84	39.95
AT2G10560.1	Thale cress	nucleus	14.29	39.93
Bra009421.1-P	Field mustard	endoplasmic reticulum, extracellular	37.45	39.48
AT5G04860.1	Thale cress	endoplasmic reticulum, extracellular	37.32	37.08
GSMUA_Achr5P06470_001	Banana	nucleus	19.69	32.42
KRH07454	Soybean	endoplasmic reticulum	7.21	29.17
Solyc04g009790.2.1	Tomato	extracellular, golgi, plasma membrane	44.92	27.81
PGSC0003DMT400056835	Potato	cytosol, nucleus	12.36	23.08

Protein Annotations

EnsemblPlants:GSMUA_Achr8P04760_001	EnsemblPlants:GSMUA_Achr8T04760_001	EnsemblPlantsGene:GSMUA_Achr8G04760_001	InterPro:IPR019448	InterPro:NT-C2	PANTHER:PTHR31182
PANTHER:PTHR31182:SF2	PFAM:PF10358	PFscan:PS51840	SEG:seg	UniParc:UPI00029493DB	UniProt:M0TMM9
MapMan:35.2	:	:	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G04760_001]

Coordinates

chr8:+:3166852..3171502

Molecular Weight (calculated)

87581.5 Da

IEP (calculated)

4.937

GRAVY (calculated)

-0.473

Length

777 amino acids

Sequence
(BLAST)

001: MVARMMRWLP WPPLQSKKYE VRVVVRRIEG VPVAGAATGA RAAAEVRWKG PKTALSSLRR GRVRRNWTRE EEVREGGVVE WDEEFLTAAT LTAHKEKGAF
101: LPWEIAFSVF TGKGPRNKCS VIGTASLNLA EFASAAEEKE MEINVTLLPP GVTTESHPVL YLALSLSELR TVRESIEVVQ SSIVPVPSSP PSSSPFPSET
201: DEPSARKDGL RKINILKALI LRRKAKMGCK DNYDSEEKCS PRNNDAEDAY PCDADSLEDS HKDLGGSKDD SSERKSFSYG TLASTHYIEG SFYSDMLINK
301: DYENLIHYGQ EKSDVSYSHV EEATASLSEQ PVPYILRRSI LSWKKSRLNL RSPKFKGEPL LKKSYGEEGG DDIDFYRRRL TSLEGSTCVV NHYDTSMANW
401: LPAHDFGDDS FTIGSWELKE VVSRDGSFKL CTQAFLASID QRSEQASGES ACAVLVAVIA DWFQANPHMM PIKSQFDHLI REGSLDWRTL CKNQTYRERF
501: PDKHFDLETV LEAKVRPLSI VPANSFVGFF CPEGTEDSES FKFLDGAMSF DNIWDEIKRA GSGGSSDGFP HLYIVSWNDH FFILKVERDA YYIIDTLGER
601: LHEGCNQAYI LKFDDTTTIH RHKNENKPGS STARDSETQI QQNNGIKEEF SGELEYIKSF LAAIPIRELQ IDLRKGLTTS TLIHNRLQIE FHYTEKLEEI
701: SAELRPASES TVTFLYSAEW DSEFSSPTES DLEPSWTREV TPDISWPVES AAEFSWPVEP AAAFFLTPSV NLEVEVV

Best Arabidopsis Sequence Match ( AT2G10560.1 )
(BLAST)

001: MCENEEYRER FPDKHFDLET VLQAKVRPIC VVPERTFIGF FHREKSKEEE EKEDVSLDFL KGVMSFDSIW EEIMKQEPEE SASEHVIYIV SWNDHYFVLL
101: VNHDAYYIID TLGERVYEGC NQAYVLKFDQ DAEIKRLPSV IKDNKADMGS QKQGGKNKYE QPERSKESEE QGEEVVVCRG KESCREYIKS FLAAIPIQQV
201: KADMKEGLVS SFHHRLQIEL YYTKHLHHRQ PNMFESSTTK VTVSEATVSM TVAWLLASQF SNSGGFGCEM AELLGIKV

Arabidopsis Description

Chaperone [Source:UniProtKB/TrEMBL;Acc:Q9SI86]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.