CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY71046	Canola	cytosol	83.45	100.0
Bra038679.1-P	Field mustard	cytosol	98.42	98.28
AT3G11760.1	Thale cress	nucleus	82.73	81.91
VIT_08s0032g01040.t01	Wine grape	mitochondrion, nucleus	64.75	60.0
KRH72142	Soybean	mitochondrion	62.59	56.57
KRH32877	Soybean	mitochondrion	61.87	55.92
KRH68026	Soybean	mitochondrion	49.5	55.75
KRG96284	Soybean	mitochondrion	59.14	54.44
PGSC0003DMT400055068	Potato	mitochondrion	59.71	54.25
Solyc01g006890.2.1	Tomato	mitochondrion	59.14	53.73
GSMUA_Achr6P31090_001	Banana	mitochondrion	54.96	53.58
GSMUA_Achr5P02610_001	Banana	mitochondrion	53.67	52.68
GSMUA_Achr2P12860_001	Banana	mitochondrion	54.68	52.49
KXG37933	Sorghum	mitochondrion	53.81	48.57
Zm00001d033510_P001	Maize	mitochondrion	52.81	48.04
TraesCS5D01G381300.1	Wheat	mitochondrion	50.65	47.63
Zm00001d021933_P001	Maize	cytosol	24.75	47.51
Os03t0649000-01	Rice	mitochondrion	53.38	47.32
TraesCS5A01G371800.1	Wheat	mitochondrion	50.36	47.23
TraesCS5B01G026400.1	Wheat	mitochondrion	50.07	47.15
TraesCS5A01G027200.1	Wheat	mitochondrion	50.36	46.92
TraesCS5D01G035100.1	Wheat	mitochondrion	50.07	46.77
TraesCS5B01G373900.1	Wheat	mitochondrion	49.78	46.69
Os12t0620600-01	Rice	mitochondrion	50.5	46.61
HORVU5Hr1G092510.5	Barley	mitochondrion	51.22	46.23
HORVU5Hr1G007680.4	Barley	mitochondrion	50.22	45.15
GSMUA_Achr4P31330_001	Banana	mitochondrion	54.24	44.72
KXG24034	Sorghum	mitochondrion	49.64	44.17
GSMUA_Achr8P04760_001	Banana	mitochondrion	48.78	43.63
CDX70194	Canola	extracellular, vacuole	45.04	43.59
Zm00001d041287_P001	Maize	mitochondrion	48.63	43.39
CDX98789	Canola	endoplasmic reticulum, extracellular	44.75	42.26
Zm00001d032528_P001	Maize	plastid	22.45	34.67
CDY11529	Canola	golgi, mitochondrion, nucleus, plastid	26.47	34.33
CDX76759	Canola	golgi, mitochondrion, nucleus, plastid	25.76	33.21
GSMUA_Achr8P26590_001	Banana	mitochondrion	51.37	30.67

Protein Annotations

EnsemblPlants:CDY47916	EnsemblPlantsGene:GSBRNA2T00088434001	InterPro:IPR019448	InterPro:NT-C2	PANTHER:PTHR31182	PANTHER:PTHR31182:SF2
PFAM:PF10358	PFscan:PS51840	ProteinID:CDY47916	ProteinID:CDY47916.1	SEG:seg	UniParc:UPI0004EE1DD8
UniProt:A0A078IDD6	MapMan:35.2	:	:	:	:

Description

BnaAnng09480DBnaAnng09480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IDD6]

Coordinates

chrLK032744:-:121115..125421

Molecular Weight (calculated)

78284.6 Da

IEP (calculated)

4.670

GRAVY (calculated)

-0.555

Length

695 amino acids

Sequence
(BLAST)

001: MVVKMMKWRP WPPLVTRKYE VKLTVRRLEG WDLAREPENE RLTVEIRWKG PKATLGSLRR PSVKRDFTKE AAAESDVVSW EEEELFQSVC SLTSYKEDDT
101: LFYPWEIAFS LFTNGMKQGQ KNKAPLVGTA SLNLSEYARV TDQREFEINI PLTLSACIAS EPHPLLCVSL SLFELRTTPE TSDSQTAVVP VPSPPPPHQT
201: EKEDVSAIKA GLRKVKIFVS TRKAKKACHR EEAEEGRFSS FESSESLDLS EEASDECKED LMSVRKSFSY GPLSYANGVG SSLNRGKKVS EEDEDWVYYS
301: HRKSDVGGGG GGGCEDVEDA SAGLVYETSS SSLLQRRSIL PWRKRKLSFR SPKAKGEPLL KKDNGEEGGD DIDYDRRQLS SDEALVRSKT DEESSSANPQ
401: QSSFLEFGDD SFAIGSWEEK DVVSRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPVKSQFDSL IREGSLEWRN LCENETYMQQ
501: FPDKHFDLDT VLQAKIRSLT VVPGKSFVGF FHPEGMINEG SFEFLQGAMS FDSIWDEIDD DDGGNDSPPR VYIVSWNDHF FVLKVENEAY YIIDTLGERL
601: YEGCDQAYIL KFDDKTVIHK NLQEEESESV SEPEVVCSGK ESCKEYIKSF LAAIPIRELQ EDIKKGLAST APVHQRLQIE FHYTKMSTST DVVAV

Best Arabidopsis Sequence Match ( AT3G11760.1 )
(BLAST)

001: MVVKMMKWRP WPPLVTRKYE VKLSVKKLEG WDLVREGVPE KDRLTVEIRW KGPKATLGSL RRSVKRNFTK EAVGESDVVS WEDEEFQSLC SLTSYKDSLF
101: YPWEITFSVF TNGMKQGQKN KAPVVGTAFL NLAEYACVTD KKEFDINIPL TLSACVASET HPLLFVSLSL LELRTTPETS DSAAQTAVVP LPLPSPSPQQ
201: PTETHSVEKE DVSAIKAGLR KVKIFTEFVS TRKAKKACRE EEGRFSSFES SESLDDFETD FDEGKEELMS MRKSFSYGPL SYANGVGTSL NCGAKVSDED
301: EDWVYYSHRK SDVGAGCSDA EDSAAGLVYE ASLLPRRSIL PWRKRKLSFR SPKSKGEPLL KKDNGEEGGD DIDFDRRQLS SDEAHPPFGS KIDEDSSANP
401: RTSFSEFGED SFAIGSWEEK EVISRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPIKSQFDSL IREGSLEWRN LCENETYMQK
501: FPDKHFDLDT VLQAKIRPLT VIPGKSFVGF FHPDGMINEG RFEFLQGAMS FDSIWAEIIS LEESSANGDS YDDDSPPHVY IVSWNDHFFV LKVEKEAYYI
601: IDTLGERLYE GCDQAYVLKF DHKTVIHKIL HTEEAGSESE PESEILSRGK ESCKEYIKNF LAAIPIRELQ EDIKKGLAST APVHHRLQIE FHYTTNAEIT
701: SL

Arabidopsis Description

F26K24.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.