Factsheet for Zm00001d033510_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG37933	Sorghum	mitochondrion	93.19	92.47
Zm00001d021933_P001	Maize	cytosol	42.41	89.5
Zm00001d032528_P001	Maize	plastid	45.68	77.56
Os03t0649000-01	Rice	mitochondrion	79.32	77.3
TraesCS5A01G371800.1	Wheat	mitochondrion	71.47	73.68
HORVU5Hr1G092510.5	Barley	mitochondrion	74.21	73.64
TraesCS5B01G373900.1	Wheat	mitochondrion	71.34	73.55
TraesCS5D01G381300.1	Wheat	mitochondrion	70.94	73.34
Zm00001d041287_P001	Maize	mitochondrion	66.23	64.96
GSMUA_Achr5P02610_001	Banana	mitochondrion	55.5	59.89
PGSC0003DMT400005067	Potato	cytosol	21.34	59.49
GSMUA_Achr2P12860_001	Banana	mitochondrion	55.37	58.43
GSMUA_Achr6P31090_001	Banana	mitochondrion	54.06	57.92
CDY71046	Canola	cytosol	42.02	55.34
VIT_08s0032g01040.t01	Wine grape	mitochondrion, nucleus	54.19	55.2
KRH32877	Soybean	mitochondrion	53.27	52.93
CDY47916	Canola	mitochondrion, nucleus	48.04	52.81
Bra038679.1-P	Field mustard	cytosol	48.04	52.73
KRH72142	Soybean	mitochondrion	53.01	52.67
AT3G11760.1	Thale cress	nucleus	48.3	52.56
PGSC0003DMT400036595	Potato	nucleus, plastid	23.95	51.99
KRG96284	Soybean	mitochondrion	51.18	51.79
Solyc01g006890.2.1	Tomato	mitochondrion	51.44	51.37
GSMUA_Achr4P31330_001	Banana	mitochondrion	56.41	51.13
KRH68026	Soybean	mitochondrion	41.23	51.05
PGSC0003DMT400055068	Potato	mitochondrion	51.05	50.98
KRH34623	Soybean	cytosol, extracellular, nucleus	45.16	48.59
Solyc11g006410.1.1	Tomato	nucleus	46.73	46.79
PGSC0003DMT400065418	Potato	extracellular, golgi	46.07	46.07
CDX70194	Canola	extracellular, vacuole	42.54	45.26
CDX98789	Canola	endoplasmic reticulum, extracellular	42.41	44.02
AT2G10560.1	Thale cress	nucleus	15.97	43.88
Bra009421.1-P	Field mustard	endoplasmic reticulum, extracellular	42.15	43.69
AT5G04860.1	Thale cress	endoplasmic reticulum, extracellular	42.54	41.56
KRH07454	Soybean	endoplasmic reticulum	8.64	34.38
Zm00001d039472_P001	Maize	mitochondrion	18.72	30.23
Zm00001d008799_P001	Maize	mitochondrion, plastid	17.8	29.63
Solyc04g009790.2.1	Tomato	extracellular, golgi, plasma membrane	46.07	28.05
PGSC0003DMT400056835	Potato	cytosol, nucleus	14.27	26.2

Protein Annotations

EnsemblPlants:Zm00001d033510_P001	EnsemblPlants:Zm00001d033510_T001	EnsemblPlantsGene:Zm00001d033510	EntrezGene:103643812	InterPro:IPR019448	InterPro:NT-C2
PANTHER:PTHR31182	PANTHER:PTHR31182:SF6	PFAM:PF10358	PFscan:PS51840	ProteinID:ONM07741.1	SEG:seg
UniParc:UPI000221BFAC	UniProt:A0A1D6KZE0	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr1:+:265094468..265098491

Molecular Weight (calculated)

84183.6 Da

IEP (calculated)

4.900

GRAVY (calculated)

-0.480

Length

764 amino acids

Sequence
(BLAST)

001: MVARMMRWPR PPAARKFRVR LLVRRAEGLP PPSPSPSPSP SPATAASPER EPPGAAQPRA AVAAEVRWKG PRASALGSLR RAAVRRNRTR EDAGAAWEEE
101: FESVVTLAAA SQREGAAFHP WELAFCVFSD INKGPKNKPS ILGTASLNLA DYALTAGETI EIILPLSIPG GAPERASSLH LTLSMVELRA FQETSDASQR
201: SAATLPLSPS SGDSFPGGKD EVSVIKAGLR KVKILTDLVS TRRPKKTCQA GGEDKFCVNS DGAEYPCDTE SLDDDLDDRV EEDEFGDSTI RKSFSYGSLQ
301: SVNYVGGLVY AHAKIDGEHE DWIYYSNRKT DVGFQVEKVL PSTTENGLLT AKRSILPWRK RKLSLRSLKA KGEPLLKKAY GEEGGDDIDN DRRLLTSSDE
401: SVSEGSRGDG SANTMVSEFG DDNFVIGNWE LKEIISRDGR MKLSSQMFFA SIDQRSERAA GESACTALVA VIADWFQANQ NIMPIQSQFD SLIREGSLEW
501: RNLCENETYR ERFPDKHFDL ETVLHAKIRP LTVSPSKSFI GFFQPEGDDD MSGFDFLNGA MSFDNIWDEI AQAAEFSSSD SPNLYIVSWN DHFFLLKVEH
601: DAYYIIDTLG ERLHEGCSQA YILKFDKNTT IHKVPGEKKS CSPDSSGPMK DSSGSESSTT DQDSGNDTEE EVLVSKGKES CKEYIKSFLA AIPIRELQAD
701: IKKGLMASTP LHHRLQIEFQ YTQSSPKETA SATQLLTMEA PFEFSWPEAP PTMEVTLTSA VSVV

Best Arabidopsis Sequence Match ( AT3G11760.1 )
(BLAST)

001: MVVKMMKWRP WPPLVTRKYE VKLSVKKLEG WDLVREGVPE KDRLTVEIRW KGPKATLGSL RRSVKRNFTK EAVGESDVVS WEDEEFQSLC SLTSYKDSLF
101: YPWEITFSVF TNGMKQGQKN KAPVVGTAFL NLAEYACVTD KKEFDINIPL TLSACVASET HPLLFVSLSL LELRTTPETS DSAAQTAVVP LPLPSPSPQQ
201: PTETHSVEKE DVSAIKAGLR KVKIFTEFVS TRKAKKACRE EEGRFSSFES SESLDDFETD FDEGKEELMS MRKSFSYGPL SYANGVGTSL NCGAKVSDED
301: EDWVYYSHRK SDVGAGCSDA EDSAAGLVYE ASLLPRRSIL PWRKRKLSFR SPKSKGEPLL KKDNGEEGGD DIDFDRRQLS SDEAHPPFGS KIDEDSSANP
401: RTSFSEFGED SFAIGSWEEK EVISRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPIKSQFDSL IREGSLEWRN LCENETYMQK
501: FPDKHFDLDT VLQAKIRPLT VIPGKSFVGF FHPDGMINEG RFEFLQGAMS FDSIWAEIIS LEESSANGDS YDDDSPPHVY IVSWNDHFFV LKVEKEAYYI
601: IDTLGERLYE GCDQAYVLKF DHKTVIHKIL HTEEAGSESE PESEILSRGK ESCKEYIKNF LAAIPIRELQ EDIKKGLAST APVHHRLQIE FHYTTNAEIT
701: SL

Arabidopsis Description

F26K24.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.