Factsheet for GSMUA_Achr4P31330_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 6
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P02610_001	Banana	mitochondrion	65.01	77.4
GSMUA_Achr2P12860_001	Banana	mitochondrion	64.41	75.0
GSMUA_Achr6P31090_001	Banana	mitochondrion	56.35	66.62
VIT_08s0032g01040.t01	Wine grape	mitochondrion, nucleus	52.91	59.47
PGSC0003DMT400005067	Potato	cytosol	18.74	57.66
KXG37933	Sorghum	mitochondrion	52.08	57.01
Zm00001d033510_P001	Maize	mitochondrion	51.13	56.41
KRH68026	Soybean	mitochondrion	41.28	56.4
Os12t0620600-01	Rice	mitochondrion	50.3	56.31
KRH32877	Soybean	mitochondrion	51.25	56.18
Os03t0649000-01	Rice	mitochondrion	52.19	56.12
TraesCS5B01G026400.1	Wheat	mitochondrion	48.52	55.42
KRH72142	Soybean	mitochondrion	50.53	55.4
TraesCS5A01G027200.1	Wheat	mitochondrion	48.99	55.36
CDY71046	Canola	cytosol	38.08	55.34
TraesCS5D01G035100.1	Wheat	mitochondrion	48.75	55.24
TraesCS5D01G381300.1	Wheat	mitochondrion	48.4	55.21
TraesCS5A01G371800.1	Wheat	mitochondrion	48.28	54.93
TraesCS5B01G373900.1	Wheat	mitochondrion	48.04	54.66
PGSC0003DMT400055068	Potato	mitochondrion	49.58	54.64
KRG96284	Soybean	mitochondrion	48.75	54.44
Zm00001d021933_P001	Maize	cytosol	23.37	54.42
CDY47916	Canola	mitochondrion, nucleus	44.72	54.24
Bra038679.1-P	Field mustard	cytosol	44.6	54.02
Solyc01g006890.2.1	Tomato	mitochondrion	48.75	53.73
KXG24034	Sorghum	mitochondrion	49.58	53.52
AT3G11760.1	Thale cress	nucleus	44.25	53.13
HORVU5Hr1G007680.4	Barley	mitochondrion	48.4	52.78
HORVU5Hr1G092510.5	Barley	mitochondrion	47.92	52.47
Zm00001d041287_P001	Maize	mitochondrion	48.4	52.37
PGSC0003DMT400036595	Potato	nucleus, plastid	21.71	51.99
KRH34623	Soybean	cytosol, extracellular, nucleus	42.47	50.42
GSMUA_Achr8P04760_001	Banana	mitochondrion	46.26	50.19
Solyc11g006410.1.1	Tomato	nucleus	42.7	47.18
PGSC0003DMT400065418	Potato	extracellular, golgi	42.23	46.6
CDX70194	Canola	extracellular, vacuole	39.5	46.38
Bra009421.1-P	Field mustard	endoplasmic reticulum, extracellular	39.74	45.45
CDX98789	Canola	endoplasmic reticulum, extracellular	39.26	44.97
AT2G10560.1	Thale cress	nucleus	14.59	44.24
GSMUA_Achr8P17400_001	Banana	mitochondrion	22.3	42.63
AT5G04860.1	Thale cress	endoplasmic reticulum, extracellular	39.26	42.33
Zm00001d032528_P001	Maize	plastid	22.42	42.0
GSMUA_Achr8P26590_001	Banana	mitochondrion	50.3	36.43
GSMUA_Achr5P06470_001	Banana	nucleus	19.81	35.38
KRH07454	Soybean	endoplasmic reticulum	7.95	34.9
Solyc04g009790.2.1	Tomato	extracellular, golgi, plasma membrane	43.89	29.48
PGSC0003DMT400056835	Potato	cytosol, nucleus	12.57	25.48

Protein Annotations

EnsemblPlants:GSMUA_Achr4P31330_001	EnsemblPlants:GSMUA_Achr4T31330_001	EnsemblPlantsGene:GSMUA_Achr4G31330_001	InterPro:IPR019448	InterPro:NT-C2	PANTHER:PTHR31182
PANTHER:PTHR31182:SF2	PFAM:PF10358	PFscan:PS51840	SEG:seg	UniParc:UPI0002951B2F	UniProt:M0STP5
MapMan:35.2	:	:	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr4G31330_001]

Coordinates

chr4:+:28576132..28586955

Molecular Weight (calculated)

95113.0 Da

IEP (calculated)

5.678

GRAVY (calculated)

-0.470

Length

843 amino acids

Sequence
(BLAST)

001: MPARMMRWRP WPPLSSKKFQ VRLVVRRVEG VRAGDEAAAV AELRKVAVEV RWKGPKVALS SLRRTVKRNR TREEEVGDGG VVEWNEEFET VCTLTAHKDS
101: GFHPWEIAFN VFNGLHHGTK NKESVLGMGS LNIAELTSTA EQEIELNLPL SLPGATDSHA SLHLALSILE LRSSQDSSDM VQRPLSPPSG DVLPSEKDEL
201: SALKAGLRKV KILTELVSTR KSKKTCQDDD HSEGKCSARS DDAEYIYPFD TDSPDDDLDE VDDSKEDTNV RKSFSYGTLA SVNNIGYEMI DGVYEDWVYY
301: NHRRSDVGCS HMEDTVLSVP ELSVSKRSIL PWKKRKLSFK SPKPKGEPLL KKAYEEGGDD IDYDRRLLSS SDESLFAGGH KGDHDGAVNR SSVSDFGDDY
401: FVVGNWESKE LVNRDGHMKL VTQVFFASID QRSERASGES ACTALVAVIA DWFQRYQDMM PVKSQFDDLI REGSLEWRNL CENQAYRERF PDKHFDLETV
501: ILAKIRPISV VPRKSFVGFF HPEGTDSNSG LDFLHGAMSF DSIWDEISRI GSEHPGDGRP QLYIVSWNDH FFVLKVEHDA YYIIDTLGER LYEGCQQAYV
601: LKFDDSTSIH KVPSESKVVD EGDLVCRGKE SCKEYIKSFL AAIPIRELQD DIKKGRMSST PLHHRLQIEF HYTESSNELS LATLSSAADA VPDLSWPVEL
701: AGAIAPVPAV LVFRTRTRML KSSAGFTFEF RRLVSERGEE CVSAVNYPCP FFIRVVIYSV FSSLGFGQIR WRIREREVEE DRERRRAMAV EEEEVGGASA
801: KKGSPPSKEA EVVSVELPAP AGWKKKTFVT FDVFAAFFIQ RRK

Best Arabidopsis Sequence Match ( AT3G11760.1 )
(BLAST)

001: MVVKMMKWRP WPPLVTRKYE VKLSVKKLEG WDLVREGVPE KDRLTVEIRW KGPKATLGSL RRSVKRNFTK EAVGESDVVS WEDEEFQSLC SLTSYKDSLF
101: YPWEITFSVF TNGMKQGQKN KAPVVGTAFL NLAEYACVTD KKEFDINIPL TLSACVASET HPLLFVSLSL LELRTTPETS DSAAQTAVVP LPLPSPSPQQ
201: PTETHSVEKE DVSAIKAGLR KVKIFTEFVS TRKAKKACRE EEGRFSSFES SESLDDFETD FDEGKEELMS MRKSFSYGPL SYANGVGTSL NCGAKVSDED
301: EDWVYYSHRK SDVGAGCSDA EDSAAGLVYE ASLLPRRSIL PWRKRKLSFR SPKSKGEPLL KKDNGEEGGD DIDFDRRQLS SDEAHPPFGS KIDEDSSANP
401: RTSFSEFGED SFAIGSWEEK EVISRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPIKSQFDSL IREGSLEWRN LCENETYMQK
501: FPDKHFDLDT VLQAKIRPLT VIPGKSFVGF FHPDGMINEG RFEFLQGAMS FDSIWAEIIS LEESSANGDS YDDDSPPHVY IVSWNDHFFV LKVEKEAYYI
601: IDTLGERLYE GCDQAYVLKF DHKTVIHKIL HTEEAGSESE PESEILSRGK ESCKEYIKNF LAAIPIRELQ EDIKKGLAST APVHHRLQIE FHYTTNAEIT
701: SL

Arabidopsis Description

F26K24.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.