Factsheet for GSMUA_Achr6P31090_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6
nucleus 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P12860_001	Banana	mitochondrion	65.36	64.36
GSMUA_Achr5P02610_001	Banana	mitochondrion	63.67	64.12
CDY71046	Canola	cytosol	46.84	57.59
PGSC0003DMT400005067	Potato	cytosol	21.88	56.93
VIT_08s0032g01040.t01	Wine grape	mitochondrion, nucleus	59.33	56.4
GSMUA_Achr4P31330_001	Banana	mitochondrion	66.62	56.35
Bra038679.1-P	Field mustard	cytosol	53.86	55.17
CDY47916	Canola	mitochondrion, nucleus	53.58	54.96
KXG37933	Sorghum	mitochondrion	58.91	54.55
KRH32877	Soybean	mitochondrion	58.77	54.49
AT3G11760.1	Thale cress	nucleus	53.58	54.42
Zm00001d021933_P001	Maize	cytosol	27.49	54.14
Os03t0649000-01	Rice	mitochondrion	59.47	54.08
Zm00001d033510_P001	Maize	mitochondrion	57.92	54.06
KRH68026	Soybean	mitochondrion	46.42	53.65
KRH72142	Soybean	mitochondrion	57.78	53.58
TraesCS5B01G026400.1	Wheat	mitochondrion	55.4	53.52
TraesCS5D01G035100.1	Wheat	mitochondrion	55.82	53.49
TraesCS5A01G027200.1	Wheat	mitochondrion	55.96	53.49
PGSC0003DMT400036595	Potato	nucleus, plastid	26.37	53.41
TraesCS5D01G381300.1	Wheat	mitochondrion	55.26	53.32
TraesCS5A01G371800.1	Wheat	mitochondrion	55.12	53.04
Os12t0620600-01	Rice	mitochondrion	55.82	52.86
TraesCS5B01G373900.1	Wheat	mitochondrion	54.7	52.63
PGSC0003DMT400055068	Potato	mitochondrion	56.1	52.29
KRG96284	Soybean	mitochondrion	54.98	51.92
Solyc01g006890.2.1	Tomato	mitochondrion	55.12	51.37
HORVU5Hr1G092510.5	Barley	mitochondrion	55.12	51.04
HORVU5Hr1G007680.4	Barley	mitochondrion	55.26	50.97
KXG24034	Sorghum	mitochondrion	55.12	50.32
KRH34623	Soybean	cytosol, extracellular, nucleus	49.23	49.44
Zm00001d041287_P001	Maize	mitochondrion	53.44	48.91
GSMUA_Achr8P04760_001	Banana	mitochondrion	52.73	48.39
Solyc11g006410.1.1	Tomato	nucleus	50.07	46.79
CDX70194	Canola	extracellular, vacuole	46.14	45.82
PGSC0003DMT400065418	Potato	extracellular, golgi	49.09	45.81
CDX98789	Canola	endoplasmic reticulum, extracellular	45.86	44.43
Bra009421.1-P	Field mustard	endoplasmic reticulum, extracellular	45.72	44.23
AT2G10560.1	Thale cress	nucleus	16.55	42.45
GSMUA_Achr8P17400_001	Banana	mitochondrion	26.09	42.18
AT5G04860.1	Thale cress	endoplasmic reticulum, extracellular	45.58	41.56
Zm00001d032528_P001	Maize	plastid	25.95	41.11
KRH07454	Soybean	endoplasmic reticulum	10.24	38.02
GSMUA_Achr8P26590_001	Banana	mitochondrion	55.82	34.19
GSMUA_Achr5P06470_001	Banana	nucleus	22.16	33.47
Solyc04g009790.2.1	Tomato	extracellular, golgi, plasma membrane	49.09	27.89
PGSC0003DMT400056835	Potato	cytosol, nucleus	15.85	27.16

Protein Annotations

EnsemblPlants:GSMUA_Achr6P31090_001	EnsemblPlants:GSMUA_Achr6T31090_001	EnsemblPlantsGene:GSMUA_Achr6G31090_001	InterPro:IPR019448	InterPro:NT-C2	PANTHER:PTHR31182
PANTHER:PTHR31182:SF2	PFAM:PF10358	PFscan:PS51840	SEG:seg	UniParc:UPI0002955099	UniProt:M0TBQ4
MapMan:35.2	:	:	:	:	:

Description

expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G31090_001]

Coordinates

chr6:+:30997240..31000720

Molecular Weight (calculated)

80372.3 Da

IEP (calculated)

5.240

GRAVY (calculated)

-0.455

Length

713 amino acids

Sequence
(BLAST)

001: MVLWRPWQPL LTRKFQVRLV VRRIEGVSVD GAAAVAAEVT WKGAKAALSS LRRTVRRNRT RNEAVGEGGV VDWNEEFEAA CTLTAHRENA FHPWEIAFRV
101: LNGLNQGPKN KESVLGTALL NLAEFVVPAA EDKIEINLPL ILSGVASNHH RPSIHVALSL LELRSSQNSS ATMPQPILPA LEPPSSGYFL PSGKDEPSAL
201: KAGLRKVKIL TDLMSTLKSK RTSQDDDSSE GRFSARSDNA ENAYPFDTDS LDDNIDEEDV EDSNEDSNVR KSFSYGTLAS ANYVGASFYS GMRNDNLIYY
301: SHRRSDVGCS HLEDAMSTDA QQSMPHSLKR KILPWKKRKL SFRSPKLKGE PLLKKAYAEE GGDDIDYDRR MLSSSDESLF AGRYKEDDDS ARNCSSSMSE
401: FGDDNFEIGK WELKELLSRD GHMKLATEVF FASIDQRSER AAGESACTAL VAVLADWFQK NHHMMPIKSQ FDSLIREGSL EWRNLCENQT FREHFPDKHF
501: DLETVLQAKI RPLCVVPRKS FIGFFHPEDI DGNSDFEFLH GAMSFDSVWD EISQARSDRS SIESPQIYIV SWNDHFFVLM VEPDAYYIID TLGERLYEGC
601: HQAYILKFDE STTIHKIPAE EGNLLCRGKE SCMEYIKNFL AAIPIRELQG DIRKGRMSST PLHHRLQIEF HYTESSTDAN FAAVWPATEA ISDYSWPAEP
701: AVDFNLSTAV VVV

Best Arabidopsis Sequence Match ( AT3G11760.1 )
(BLAST)

001: MVVKMMKWRP WPPLVTRKYE VKLSVKKLEG WDLVREGVPE KDRLTVEIRW KGPKATLGSL RRSVKRNFTK EAVGESDVVS WEDEEFQSLC SLTSYKDSLF
101: YPWEITFSVF TNGMKQGQKN KAPVVGTAFL NLAEYACVTD KKEFDINIPL TLSACVASET HPLLFVSLSL LELRTTPETS DSAAQTAVVP LPLPSPSPQQ
201: PTETHSVEKE DVSAIKAGLR KVKIFTEFVS TRKAKKACRE EEGRFSSFES SESLDDFETD FDEGKEELMS MRKSFSYGPL SYANGVGTSL NCGAKVSDED
301: EDWVYYSHRK SDVGAGCSDA EDSAAGLVYE ASLLPRRSIL PWRKRKLSFR SPKSKGEPLL KKDNGEEGGD DIDFDRRQLS SDEAHPPFGS KIDEDSSANP
401: RTSFSEFGED SFAIGSWEEK EVISRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPIKSQFDSL IREGSLEWRN LCENETYMQK
501: FPDKHFDLDT VLQAKIRPLT VIPGKSFVGF FHPDGMINEG RFEFLQGAMS FDSIWAEIIS LEESSANGDS YDDDSPPHVY IVSWNDHFFV LKVEKEAYYI
601: IDTLGERLYE GCDQAYVLKF DHKTVIHKIL HTEEAGSESE PESEILSRGK ESCKEYIKNF LAAIPIRELQ EDIKKGLAST APVHHRLQIE FHYTTNAEIT
701: SL

Arabidopsis Description

F26K24.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.