CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d041287_P001	Maize	mitochondrion	91.42	91.66
Os12t0620600-01	Rice	mitochondrion	72.73	75.43
TraesCS5A01G027200.1	Wheat	mitochondrion	70.42	73.73
TraesCS5B01G026400.1	Wheat	mitochondrion	69.53	73.58
TraesCS5D01G035100.1	Wheat	mitochondrion	69.91	73.39
HORVU5Hr1G007680.4	Barley	mitochondrion	68.5	69.21
KXG37933	Sorghum	mitochondrion	67.09	68.05
PGSC0003DMT400005067	Potato	cytosol	20.87	59.49
GSMUA_Achr5P02610_001	Banana	mitochondrion	51.98	57.34
GSMUA_Achr2P12860_001	Banana	mitochondrion	51.6	55.66
GSMUA_Achr6P31090_001	Banana	mitochondrion	50.32	55.12
VIT_08s0032g01040.t01	Wine grape	mitochondrion, nucleus	50.58	52.67
CDY71046	Canola	cytosol	38.92	52.41
KRH32877	Soybean	mitochondrion	50.06	50.85
KRH72142	Soybean	mitochondrion	49.94	50.72
CDY47916	Canola	mitochondrion, nucleus	44.17	49.64
GSMUA_Achr4P31330_001	Banana	mitochondrion	53.52	49.58
Bra038679.1-P	Field mustard	cytosol	44.05	49.43
KRG96284	Soybean	mitochondrion	47.63	49.27
Solyc01g006890.2.1	Tomato	mitochondrion	47.76	48.76
PGSC0003DMT400055068	Potato	mitochondrion	47.76	48.76
AT3G11760.1	Thale cress	nucleus	43.41	48.29
KRH68026	Soybean	mitochondrion	37.77	47.81
PGSC0003DMT400036595	Potato	nucleus, plastid	21.51	47.73
KRH34623	Soybean	cytosol, extracellular, nucleus	42.77	47.04
PGSC0003DMT400065418	Potato	extracellular, golgi	44.05	45.03
Solyc11g006410.1.1	Tomato	nucleus	43.79	44.82
AT2G10560.1	Thale cress	nucleus	15.36	43.17
CDX70194	Canola	extracellular, vacuole	39.18	42.62
Bra009421.1-P	Field mustard	endoplasmic reticulum, extracellular	39.31	41.66
CDX98789	Canola	endoplasmic reticulum, extracellular	39.18	41.58
AT5G04860.1	Thale cress	endoplasmic reticulum, extracellular	39.05	39.0
EES00132	Sorghum	mitochondrion	24.84	36.74
KRH07454	Soybean	endoplasmic reticulum	7.68	31.25
Solyc04g009790.2.1	Tomato	extracellular, golgi, plasma membrane	44.05	27.41
PGSC0003DMT400056835	Potato	cytosol, nucleus	12.42	23.32

Protein Annotations

EnsemblPlants:KXG24034	EnsemblPlantsGene:SORBI_3008G175900	InterPro:IPR019448	InterPro:NT-C2	PANTHER:PTHR31182	PANTHER:PTHR31182:SF6
PFAM:PF10358	PFscan:PS51840	ProteinID:KXG24034	ProteinID:KXG24034.1	SEG:seg	UniParc:UPI00081AB792
UniProt:A0A1B6PEC6	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:60982615..60987488

Molecular Weight (calculated)

86337.0 Da

IEP (calculated)

4.718

GRAVY (calculated)

-0.438

Length

781 amino acids

Sequence
(BLAST)

001: MVARMMRWPR PPPARNFRVR LVVRRAEGLP PPPSPLSPEG SPEAEAKVFV EVSWKGPKMS PLTSLRRSQR PPRNQTRKEA LPAVATADLE DGAAAAPAPA
101: AVSAVAWEEE FERDAALTAT SHRDPAVFHP WDVAFSVVSE SNKMSKSKLV LGTASLNLAD YASAAEEEIE IILPLSVPSS AMDLAPSLHL TLSLVELRIS
201: QQSPGASQRS VIAPLSPSSG DSVPSGKDEV SVIKVGLRNL KILRDLVSTR RFKKTNQDYD GSEEKYYVHS DGAEFSCDTD SLDDDLDDRE QDDEFGGSAV
301: RKSFSYGSLQ TMNVGALLYA PRIDGDDEGW VHYSHRNSDV SYHVEQVPSS TAEEHASIPL RRKRSLLPAR WRKTKLPKAK GEPLLKPYGE EGGDDIDYDR
401: RLLTPSDGSV SEGSNGSGNS MVSVFGDDDF VVGNWESKEV FSRDGHLKLS TQVFFASIDQ RSERAAGESA CTALVAVVAD WFQANQDLMP IRSQFDNLIR
501: EGSLEWRKLC ENETYRERFP DKHFDLETVL HAKIRPLTVA PSKSFIGFFH PEGTEDVSGF DFLDGAMSFD NIWDEISRAA ECSSGKPTIY IVSWNDHFFV
601: LKVDVDAYYI IDTLGERLSE GCNQAYILKF DDTTTIHKVP AEKKESNPDT DGRHNKDSSE ICSAEQDSGT DTEECELVLK GKDACKEYIK SFLAAIPIRE
701: LQADIKKGLM ASTPLHHRLQ IEFHYTESCP AEISVPAPLS PFEAPFEFCW PEPPSPPPAT EFAVTYPPAM EVAITQAVAV I

Best Arabidopsis Sequence Match ( AT3G11760.1 )
(BLAST)

001: MVVKMMKWRP WPPLVTRKYE VKLSVKKLEG WDLVREGVPE KDRLTVEIRW KGPKATLGSL RRSVKRNFTK EAVGESDVVS WEDEEFQSLC SLTSYKDSLF
101: YPWEITFSVF TNGMKQGQKN KAPVVGTAFL NLAEYACVTD KKEFDINIPL TLSACVASET HPLLFVSLSL LELRTTPETS DSAAQTAVVP LPLPSPSPQQ
201: PTETHSVEKE DVSAIKAGLR KVKIFTEFVS TRKAKKACRE EEGRFSSFES SESLDDFETD FDEGKEELMS MRKSFSYGPL SYANGVGTSL NCGAKVSDED
301: EDWVYYSHRK SDVGAGCSDA EDSAAGLVYE ASLLPRRSIL PWRKRKLSFR SPKSKGEPLL KKDNGEEGGD DIDFDRRQLS SDEAHPPFGS KIDEDSSANP
401: RTSFSEFGED SFAIGSWEEK EVISRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPIKSQFDSL IREGSLEWRN LCENETYMQK
501: FPDKHFDLDT VLQAKIRPLT VIPGKSFVGF FHPDGMINEG RFEFLQGAMS FDSIWAEIIS LEESSANGDS YDDDSPPHVY IVSWNDHFFV LKVEKEAYYI
601: IDTLGERLYE GCDQAYVLKF DHKTVIHKIL HTEEAGSESE PESEILSRGK ESCKEYIKNF LAAIPIRELQ EDIKKGLAST APVHHRLQIE FHYTTNAEIT
701: SL

Arabidopsis Description

F26K24.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.