Factsheet for TraesCS5D01G035100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G027200.1	Wheat	mitochondrion	97.45	97.19
TraesCS5B01G026400.1	Wheat	mitochondrion	93.01	93.77
HORVU5Hr1G007680.4	Barley	mitochondrion	90.73	87.32
Os12t0620600-01	Rice	mitochondrion	78.36	77.42
KXG24034	Sorghum	mitochondrion	73.39	69.91
Zm00001d041287_P001	Maize	mitochondrion	72.04	68.81
TraesCS5D01G381300.1	Wheat	mitochondrion	68.01	68.47
PGSC0003DMT400005067	Potato	cytosol	21.77	59.12
GSMUA_Achr5P02610_001	Banana	mitochondrion	54.03	56.78
GSMUA_Achr6P31090_001	Banana	mitochondrion	53.49	55.82
GSMUA_Achr2P12860_001	Banana	mitochondrion	54.17	55.66
CDY71046	Canola	cytosol	41.4	53.1
VIT_08s0032g01040.t01	Wine grape	mitochondrion, nucleus	52.96	52.53
KRH72142	Soybean	mitochondrion	52.42	50.72
KRH32877	Soybean	mitochondrion	52.28	50.59
KRG96284	Soybean	mitochondrion	51.21	50.46
Bra038679.1-P	Field mustard	cytosol	46.91	50.14
CDY47916	Canola	mitochondrion, nucleus	46.77	50.07
PGSC0003DMT400036595	Potato	nucleus, plastid	23.66	50.0
AT3G11760.1	Thale cress	nucleus	46.64	49.43
Solyc01g006890.2.1	Tomato	mitochondrion	50.13	48.76
GSMUA_Achr4P31330_001	Banana	mitochondrion	55.24	48.75
PGSC0003DMT400055068	Potato	mitochondrion	50.0	48.63
KRH34623	Soybean	cytosol, extracellular, nucleus	46.1	48.31
KRH68026	Soybean	mitochondrion	40.05	48.3
Solyc11g006410.1.1	Tomato	nucleus	46.37	45.22
PGSC0003DMT400065418	Potato	extracellular, golgi	45.83	44.63
CDX70194	Canola	extracellular, vacuole	42.2	43.73
CDX98789	Canola	endoplasmic reticulum, extracellular	42.61	43.07
Bra009421.1-P	Field mustard	endoplasmic reticulum, extracellular	42.2	42.61
AT2G10560.1	Thale cress	nucleus	15.86	42.45
AT5G04860.1	Thale cress	endoplasmic reticulum, extracellular	41.94	39.9
KRH07454	Soybean	endoplasmic reticulum	9.14	35.42
TraesCS3D01G107900.2	Wheat	mitochondrion	27.69	32.44
Solyc04g009790.2.1	Tomato	extracellular, golgi, plasma membrane	45.83	27.17
PGSC0003DMT400056835	Potato	cytosol, nucleus	13.98	25.0

Protein Annotations

EnsemblPlants:TraesCS5D01G035100.1	EnsemblPlantsGene:TraesCS5D01G035100	InterPro:IPR019448	InterPro:NT-C2	PANTHER:PTHR31182	PANTHER:PTHR31182:SF6
PFAM:PF10358	PFscan:PS51840	SEG:seg	MapMan:35.2	:	:

Description

No Description!

Coordinates

chr5D:-:34076013..34080761

Molecular Weight (calculated)

82429.3 Da

IEP (calculated)

4.770

GRAVY (calculated)

-0.469

Length

744 amino acids

Sequence
(BLAST)

001: MLAMRWPWPP AARKFSVRLV VRRAEGLPLA PATDADAEAR MAVELKWKGP KARWKGLRVC RNRTRLEAPA PAVDAEFSAA AVAWEEEFED VVTLTAVSHR
101: KPAAAFHPWD LFFSVLNDSN KGPKGEVILG TASLNLADYT SPAEEEIEII LPLSVPNGTP ESSPSLHLTL SLVELRLPQQ SPDAAQRSVA CVPLSPSSGD
201: SVPSGKDEHS VIKAGLRKVK IITDLVSTRR SKKAKREDDS SDKYVHSDGA EYPCVIDSDD DLDDRQRDDD LGGSTVRKSF SYGSLQSVNV AGGLFYAHAR
301: IDGEHEDWIY YSHRKSDAGY HVEKEPSSTS EENSSVVIPR KRSILPWRKV KLPKKGEPLL KNKNGEEGGD DIDYDRRLLT SSDESVSGGS SGSVSTMESV
401: FGDDNFVVGN WESKEVLSRD GHLKLSTQVF FASIDQRSER AAGESACTAL VAVIADWFQA NQELMPIRSQ FDSLIREGSL EWRKLCENET YRERFSDKHF
501: DLETVLHAKI RPLTVAPNKS FVGFFQPESA EDGSGFDFLD GAMSFDNIWE EISQAAEAST EKPTLYVVSW NDHFFVLKVE ADAYYIIDTL GERLYEGCNQ
601: AYILKFDDNT TIHKEPAEKK EGSPDSSAHQ KDSAESSSTE QDSGTDDTEE SVLVLKGKEA CKEYIKSFLA AIPIRELQAD IKKGLMASTP LHHRLQIEFH
701: YTEACPREIA LPAPPPAIEA PFEFCWPDPP PAMEFPLAPA VAVV

Best Arabidopsis Sequence Match ( AT3G11760.1 )
(BLAST)

001: MVVKMMKWRP WPPLVTRKYE VKLSVKKLEG WDLVREGVPE KDRLTVEIRW KGPKATLGSL RRSVKRNFTK EAVGESDVVS WEDEEFQSLC SLTSYKDSLF
101: YPWEITFSVF TNGMKQGQKN KAPVVGTAFL NLAEYACVTD KKEFDINIPL TLSACVASET HPLLFVSLSL LELRTTPETS DSAAQTAVVP LPLPSPSPQQ
201: PTETHSVEKE DVSAIKAGLR KVKIFTEFVS TRKAKKACRE EEGRFSSFES SESLDDFETD FDEGKEELMS MRKSFSYGPL SYANGVGTSL NCGAKVSDED
301: EDWVYYSHRK SDVGAGCSDA EDSAAGLVYE ASLLPRRSIL PWRKRKLSFR SPKSKGEPLL KKDNGEEGGD DIDFDRRQLS SDEAHPPFGS KIDEDSSANP
401: RTSFSEFGED SFAIGSWEEK EVISRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPIKSQFDSL IREGSLEWRN LCENETYMQK
501: FPDKHFDLDT VLQAKIRPLT VIPGKSFVGF FHPDGMINEG RFEFLQGAMS FDSIWAEIIS LEESSANGDS YDDDSPPHVY IVSWNDHFFV LKVEKEAYYI
601: IDTLGERLYE GCDQAYVLKF DHKTVIHKIL HTEEAGSESE PESEILSRGK ESCKEYIKNF LAAIPIRELQ EDIKKGLAST APVHHRLQIE FHYTTNAEIT
701: SL

Arabidopsis Description

F26K24.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.