Factsheet for Solyc01g006890.2.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 4
extracellular 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400055068	Potato	mitochondrion	95.42	95.42
VIT_08s0032g01040.t01	Wine grape	mitochondrion, nucleus	67.19	68.53
KRH68026	Soybean	mitochondrion	51.11	63.37
KRH32877	Soybean	mitochondrion	63.27	62.94
KRH72142	Soybean	mitochondrion	63.27	62.94
CDY71046	Canola	cytosol	46.54	61.38
KRG96284	Soybean	mitochondrion	59.61	60.4
Bra038679.1-P	Field mustard	cytosol	53.99	59.34
AT3G11760.1	Thale cress	nucleus	54.38	59.26
CDY47916	Canola	mitochondrion, nucleus	53.73	59.14
GSMUA_Achr5P02610_001	Banana	mitochondrion	52.16	56.36
GSMUA_Achr2P12860_001	Banana	mitochondrion	53.07	56.08
GSMUA_Achr6P31090_001	Banana	mitochondrion	51.37	55.12
Solyc11g006410.1.1	Tomato	nucleus	52.16	52.29
Zm00001d033510_P001	Maize	mitochondrion	51.37	51.44
KXG37933	Sorghum	mitochondrion	51.76	51.43
Zm00001d021933_P001	Maize	cytosol	24.31	51.38
TraesCS5A01G371800.1	Wheat	mitochondrion	49.41	51.01
TraesCS5D01G381300.1	Wheat	mitochondrion	49.15	50.88
TraesCS5B01G026400.1	Wheat	mitochondrion	49.02	50.81
TraesCS5B01G373900.1	Wheat	mitochondrion	49.15	50.74
TraesCS5A01G027200.1	Wheat	mitochondrion	49.15	50.4
TraesCS5D01G035100.1	Wheat	mitochondrion	48.76	50.13
Os12t0620600-01	Rice	mitochondrion	48.89	49.67
Os03t0649000-01	Rice	mitochondrion	50.59	49.36
GSMUA_Achr4P31330_001	Banana	mitochondrion	53.73	48.75
HORVU5Hr1G092510.5	Barley	mitochondrion	48.89	48.57
HORVU5Hr1G007680.4	Barley	mitochondrion	49.02	48.51
KXG24034	Sorghum	mitochondrion	48.76	47.76
Zm00001d041287_P001	Maize	mitochondrion	47.19	46.34
GSMUA_Achr8P04760_001	Banana	mitochondrion	45.75	45.05
Zm00001d032528_P001	Maize	plastid	21.7	36.89
Solyc08g059710.2.1	Tomato	nucleus	26.8	36.74
GSMUA_Achr8P26590_001	Banana	mitochondrion	50.33	33.08
Solyc04g009790.2.1	Tomato	extracellular, golgi, plasma membrane	49.8	30.36

Protein Annotations

EnsemblPlants:Solyc01g006890.2.1	EnsemblPlantsGene:Solyc01g006890.2	InterPro:IPR019448	InterPro:NT-C2	PANTHER:PTHR31182	PANTHER:PTHR31182:SF2
PFAM:PF10358	PFscan:PS51840	SEG:seg	UniParc:UPI00027626DD	UniProt:K4ASQ5	MapMan:35.2

Description

No Description!

Coordinates

chr1:+:1466483..1471428

Molecular Weight (calculated)

85734.9 Da

IEP (calculated)

4.875

GRAVY (calculated)

-0.502

Length

765 amino acids

Sequence
(BLAST)

001: MVVKMMKWRP WPPLISKKFE VKIFVGKVEN LVCEVYSSGG VAVEIRWKGP PRIALSSFRK TVKRNCTREE MVKNGPNGGV LVEWDEEFQS LCNLSGYKDN
101: VFHPWEIAFT VLNGMNAKNK APIVGTAVLN VAEFAAKIEE REFKLNIPLV VPGGASETRP TLCISLSLFE LRATQESTEL VQRPLASVQS PARSVETPPV
201: EKDELSALKA GLRKVKIFTE YVSTRRAKKA CREEEGSEER SSARSEEGEY AYPFDSESND EYEEGESDEA KEDPTVRKSF SYGPLAYANC AGVSFHSSTR
301: VNGEGEDWVY FSNRRSDVGC SQMDDQVTCA SDLVVLQNSK RSILPWRKRK LSFRSPKSKG EPLLKKDNGE EGGDDIDFDR RQLSSDGALS FGVHKVEEGL
401: TANRSSVAEF GDDNFAVGCW EQKEIISRDE HMKLQTQVFF ASIDQRSERA AGESACTALV AVVADWLQHN RGLMPIKSQF DSLIREGSLE WRKLCENETY
501: RERFPDKHFD LETVLQAKIR SITVMPGNSF VGFFHPDGMD EGGFDFLHGA MSFDNIWDEI SRAGLQYTSM GEPQIYIVSW NDHFFVLKVE AEAYYIIDTL
601: GERLYEGCNQ AYILKFDKDT TIYKQPDTTD STEEKPAVDQ QTISTTAEPK LSDGPRTNAT PGSLESEAVN KSDEPSKAES AEEIICQGKE SCKDYIKSFL
701: AAIPIRELQA DIKKGLKTST PLHQRLQIEL HFTHLQQQPL ITTPAIEIAT AAQEPPAVAM SEIST

Best Arabidopsis Sequence Match ( AT3G11760.1 )
(BLAST)

001: MVVKMMKWRP WPPLVTRKYE VKLSVKKLEG WDLVREGVPE KDRLTVEIRW KGPKATLGSL RRSVKRNFTK EAVGESDVVS WEDEEFQSLC SLTSYKDSLF
101: YPWEITFSVF TNGMKQGQKN KAPVVGTAFL NLAEYACVTD KKEFDINIPL TLSACVASET HPLLFVSLSL LELRTTPETS DSAAQTAVVP LPLPSPSPQQ
201: PTETHSVEKE DVSAIKAGLR KVKIFTEFVS TRKAKKACRE EEGRFSSFES SESLDDFETD FDEGKEELMS MRKSFSYGPL SYANGVGTSL NCGAKVSDED
301: EDWVYYSHRK SDVGAGCSDA EDSAAGLVYE ASLLPRRSIL PWRKRKLSFR SPKSKGEPLL KKDNGEEGGD DIDFDRRQLS SDEAHPPFGS KIDEDSSANP
401: RTSFSEFGED SFAIGSWEEK EVISRDGHMK LQTSVFLASI DQRSERAAGE SACTALVAVI ADWFQKNGNL MPIKSQFDSL IREGSLEWRN LCENETYMQK
501: FPDKHFDLDT VLQAKIRPLT VIPGKSFVGF FHPDGMINEG RFEFLQGAMS FDSIWAEIIS LEESSANGDS YDDDSPPHVY IVSWNDHFFV LKVEKEAYYI
601: IDTLGERLYE GCDQAYVLKF DHKTVIHKIL HTEEAGSESE PESEILSRGK ESCKEYIKNF LAAIPIRELQ EDIKKGLAST APVHHRLQIE FHYTTNAEIT
701: SL

Arabidopsis Description

F26K24.5 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF22]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.