Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc08g059710.2.1 | Tomato | nucleus | 77.57 | 79.93 |
| PGSC0003DMT400005067 | Potato | cytosol | 22.09 | 46.35 |
| VIT_04s0008g05510.t01 | Wine grape | nucleus | 39.65 | 38.26 |
| Bra007798.1-P | Field mustard | golgi, mitochondrion, nucleus, plastid | 32.87 | 35.2 |
| Os01t0194000-01 | Rice | cytosol | 29.39 | 34.99 |
| AT2G25460.2 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 33.22 | 34.98 |
| CDY11529 | Canola | golgi, mitochondrion, nucleus, plastid | 32.52 | 34.89 |
| GSMUA_Achr5P06470_001 | Banana | nucleus | 28.52 | 34.75 |
| CDX76759 | Canola | golgi, mitochondrion, nucleus, plastid | 32.52 | 34.69 |
| KRH52431 | Soybean | golgi, mitochondrion, nucleus, plastid | 37.04 | 34.24 |
| KRH05176 | Soybean | cytosol | 36.0 | 33.77 |
| KRH61765 | Soybean | mitochondrion | 36.52 | 33.71 |
| KRH15881 | Soybean | cytosol | 35.65 | 33.44 |
| EES00132 | Sorghum | mitochondrion | 30.09 | 32.77 |
| TraesCS3B01G124200.1 | Wheat | mitochondrion | 30.96 | 30.07 |
| TraesCS3A01G105700.1 | Wheat | mitochondrion | 30.96 | 29.62 |
| PGSC0003DMT400055068 | Potato | mitochondrion | 36.7 | 27.58 |
| TraesCS3D01G107900.2 | Wheat | mitochondrion | 30.43 | 27.56 |
| PGSC0003DMT400065418 | Potato | extracellular, golgi | 35.48 | 26.7 |
| HORVU3Hr1G019320.2 | Barley | cytosol, plastid | 28.7 | 26.53 |
| PGSC0003DMT400036595 | Potato | nucleus, plastid | 15.3 | 25.0 |
| Zm00001d039472_P001 | Maize | mitochondrion | 20.35 | 24.74 |
| Zm00001d008799_P001 | Maize | mitochondrion, plastid | 18.43 | 23.09 |
| PGSC0003DMT400056835 | Potato | cytosol, nucleus | 8.52 | 11.78 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400082714 | EnsemblPlantsGene:PGSC0003DMG400032778 | EntrezGene:102603587 | InterPro:IPR019448 | InterPro:NT-C2 | PANTHER:PTHR31182 |
| PFscan:PS51840 | PGSC:PGSC0003DMG400032778 | RefSeq:XP_006343529.1 | SEG:seg | UniParc:UPI0002964A15 | UniProt:M1D649 |
| MapMan:35.2 | : | : | : | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400032778]
Coordinates
chr8:+:16640857..16644181
Molecular Weight (calculated)
66242.8 Da
IEP (calculated)
6.441
GRAVY (calculated)
-0.461
Length
575 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVTRKYKVK MRPLKLELGV DDLDKENQES RKVKMMTIEM KWKGESKFGL VQFYKYKKDF TSRRFMKDNS VKWDNDADEF ENVCCFTEVS GCYQSLKYSP
101: WDVSFNVLYA TSFEKMVVIG KVVVNVAELA ARRMCLVEEK LPITLNIGKT SVSAILHVNI TFGEMKESVG CVRDWNESRQ LQCLAKSSSV CDRKGYKLSQ
201: EDESSTFEAE VPKAIESSSE TQPVLVKKVG WFSWKRRRLS LRPIRPSKEE ALIKRTCSFG VDSRLNQQIV EKAEPSAESS HQNEPAWEVK ELQSRDRQTK
301: LKTEVFFASF DQCSDKAAGE SACTALVAVI SHWLQSNRVA MPTRPEFDNL ILQGSTEWRK LCQNDTYIND FPNKHFDLET VLHAGIRPLS ISHDQSFVGF
401: FIPEKFDSLQ GVMSFDQIWD KISSVTDGIE FEPRVYIISW NDHFFVLKVE ENAYYIIDTL GERLYEGCSK AYILRFDDNT MIYENVAEEK SQKNDTKDKE
501: EMICKGKECC REFIKRFLAA IPLKELEEQE KKETISYVSL HHRLQIEFNL SYLLSSSSSS LTSSPFSSSS TTSTL
101: WDVSFNVLYA TSFEKMVVIG KVVVNVAELA ARRMCLVEEK LPITLNIGKT SVSAILHVNI TFGEMKESVG CVRDWNESRQ LQCLAKSSSV CDRKGYKLSQ
201: EDESSTFEAE VPKAIESSSE TQPVLVKKVG WFSWKRRRLS LRPIRPSKEE ALIKRTCSFG VDSRLNQQIV EKAEPSAESS HQNEPAWEVK ELQSRDRQTK
301: LKTEVFFASF DQCSDKAAGE SACTALVAVI SHWLQSNRVA MPTRPEFDNL ILQGSTEWRK LCQNDTYIND FPNKHFDLET VLHAGIRPLS ISHDQSFVGF
401: FIPEKFDSLQ GVMSFDQIWD KISSVTDGIE FEPRVYIISW NDHFFVLKVE ENAYYIIDTL GERLYEGCSK AYILRFDDNT MIYENVAEEK SQKNDTKDKE
501: EMICKGKECC REFIKRFLAA IPLKELEEQE KKETISYVSL HHRLQIEFNL SYLLSSSSSS LTSSPFSSSS TTSTL
001: MAKKVRKLHV TVKPVRLDGL PAILGDETAG KNLSAMVEVK WKGPVSGFGL GFVPFYRSNR PVNHTSSKPI ALGSNHVEWE EEFERVCCIV GPWNLSFNVF
101: YGENMDAKNK KSLIGKASLD LSELASKQES TVERKLPIRS KGSVLSKEAT LVVNVTFSEV RTEPDDFMQL GQISVDSAIP KKKSTSRRGG GSHFDSFSSP
201: ATASSSGGRS PVVETGLFSS PDENQSEPGQ KAGFNWWKRR RLSFSMTWRR EPREDEVTKT STKPSEELEK PATEIPIEAN KWVMKDLVSR DGKSKLKSEV
301: YLASIDQRSE QAAGEAACAA VAVVVAHWFH ANPKLINPSG TAFDSLITQG SSLWQSLCDK ESYLRLFPNR HFDLETIVSA NLRPVRVCTD KSFTGLFSPE
401: RFASLDGLMS FDQIWDEVEK EVALASSNGE TRVYIVSWND HFFVVKADLD GFCVIDSLGE RLFEGCKQAY ILKFDDSSLM YEKEESSEKL VCEGKKCCRE
501: YIKSFLAAIP VAELAAKEEK GNVVDVSLLH ERLQIDLHHI ILTSSD
101: YGENMDAKNK KSLIGKASLD LSELASKQES TVERKLPIRS KGSVLSKEAT LVVNVTFSEV RTEPDDFMQL GQISVDSAIP KKKSTSRRGG GSHFDSFSSP
201: ATASSSGGRS PVVETGLFSS PDENQSEPGQ KAGFNWWKRR RLSFSMTWRR EPREDEVTKT STKPSEELEK PATEIPIEAN KWVMKDLVSR DGKSKLKSEV
301: YLASIDQRSE QAAGEAACAA VAVVVAHWFH ANPKLINPSG TAFDSLITQG SSLWQSLCDK ESYLRLFPNR HFDLETIVSA NLRPVRVCTD KSFTGLFSPE
401: RFASLDGLMS FDQIWDEVEK EVALASSNGE TRVYIVSWND HFFVVKADLD GFCVIDSLGE RLFEGCKQAY ILKFDDSSLM YEKEESSEKL VCEGKKCCRE
501: YIKSFLAAIP VAELAAKEEK GNVVDVSLLH ERLQIDLHHI ILTSSD
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04860.1); Has 108 Blast hits to 69 proteins in 11 species: Archae - 0; Bacteria - 0; Meta /.../0; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). [Source:TAIR;Acc:AT2G25460]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.