Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, golgi, plastid, nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 2
- mitochondrion 2
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY11529 | Canola | golgi, mitochondrion, nucleus, plastid | 90.5 | 90.67 |
| CDX76759 | Canola | golgi, mitochondrion, nucleus, plastid | 86.22 | 85.9 |
| AT2G25460.2 | Thale cress | cytosol, mitochondrion, nucleus, plastid | 78.21 | 76.92 |
| PGSC0003DMT400082714 | Potato | nucleus | 35.2 | 32.87 |
| Solyc08g059710.2.1 | Tomato | nucleus | 34.08 | 32.8 |
| VIT_04s0008g05510.t01 | Wine grape | nucleus | 36.13 | 32.55 |
| Os01t0194000-01 | Rice | cytosol | 27.19 | 30.23 |
| KRH52431 | Soybean | golgi, mitochondrion, nucleus, plastid | 34.82 | 30.06 |
| KRH15881 | Soybean | cytosol | 34.26 | 30.02 |
| KRH05176 | Soybean | cytosol | 33.52 | 29.36 |
| KRH61765 | Soybean | mitochondrion | 33.71 | 29.05 |
| EES00132 | Sorghum | mitochondrion | 28.49 | 28.98 |
| TraesCS3B01G124200.1 | Wheat | mitochondrion | 30.73 | 27.87 |
| TraesCS3A01G105700.1 | Wheat | mitochondrion | 30.73 | 27.45 |
| GSMUA_Achr5P06470_001 | Banana | nucleus | 23.46 | 26.69 |
| Bra038679.1-P | Field mustard | cytosol | 34.45 | 26.58 |
| TraesCS3D01G107900.2 | Wheat | mitochondrion | 31.28 | 26.46 |
| Bra009421.1-P | Field mustard | endoplasmic reticulum, extracellular | 35.01 | 25.51 |
| Zm00001d039472_P001 | Maize | mitochondrion | 21.79 | 24.74 |
| HORVU3Hr1G019320.2 | Barley | cytosol, plastid | 28.12 | 24.28 |
| Zm00001d008799_P001 | Maize | mitochondrion, plastid | 19.93 | 23.31 |
Protein Annotations
Description
AT2G25460 (E=7e-178) | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, root, carpel, stamen; EXPRESSED DURING: M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04860.1); Has 53 Blast hits to 36 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Coordinates
chrA09:+:30924144..30926154
Molecular Weight (calculated)
59749.8 Da
IEP (calculated)
6.170
GRAVY (calculated)
-0.344
Length
537 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKKVRKLHV SVKPVRLHGL PVVLGGETVA KNVFAMVELK WKGPVSGFGL GLVPFYRSNR PANHTTSKPI ALGASHVEWE DEFERVCCIV GPWNLSFTVF
101: YGETIDAKNK KAIVGKASLD LSELPSKLES TVERKLPIRS KGLLWKEATL VVNVTFSQVR NEPDDFTQLG PVTVDSAITT NMPSRRGGMD FDSSSSPATA
201: SNSGGVSPIL GTGSNSSPEN QSEPGHKAGF NWWKRRRLSF SMTWRREPRE EESTTKTPPS AATESEKPAT ELSFEPNRWV AKDLSSRDGK SKLRSEVYTA
301: SIDQRSEQAG GEAACAAVAV VVAHWFQANP RLINPSETEF DSLITQGSSL WQSLSDEESY LTLFPDRHFD LETVVSAKLR PVKVCTDKSF TGFFSPERFA
401: SLEGLMSFDQ IWDEVEKEVR AASEIGEARV YIMSWNDHFF VVKGDIEGYC VIDSLGERLF EGCKQAYILK FDDSSLMYEK EKLVCKGKEC CREYIKRFLA
501: AIPVAELAAK EEKGDADVSL LHEKLQIDLH HIMLIGD
101: YGETIDAKNK KAIVGKASLD LSELPSKLES TVERKLPIRS KGLLWKEATL VVNVTFSQVR NEPDDFTQLG PVTVDSAITT NMPSRRGGMD FDSSSSPATA
201: SNSGGVSPIL GTGSNSSPEN QSEPGHKAGF NWWKRRRLSF SMTWRREPRE EESTTKTPPS AATESEKPAT ELSFEPNRWV AKDLSSRDGK SKLRSEVYTA
301: SIDQRSEQAG GEAACAAVAV VVAHWFQANP RLINPSETEF DSLITQGSSL WQSLSDEESY LTLFPDRHFD LETVVSAKLR PVKVCTDKSF TGFFSPERFA
401: SLEGLMSFDQ IWDEVEKEVR AASEIGEARV YIMSWNDHFF VVKGDIEGYC VIDSLGERLF EGCKQAYILK FDDSSLMYEK EKLVCKGKEC CREYIKRFLA
501: AIPVAELAAK EEKGDADVSL LHEKLQIDLH HIMLIGD
001: MAKKVRKLHV TVKPVRLDGL PAILGDETAG KNLSAMVEVK WKGPVSGFGL GFVPFYRSNR PVNHTSSKPI ALGSNHVEWE EEFERVCCIV GPWNLSFNVF
101: YGENMDAKNK KSLIGKASLD LSELASKQES TVERKLPIRS KGSVLSKEAT LVVNVTFSEV RTEPDDFMQL GQISVDSAIP KKKSTSRRGG GSHFDSFSSP
201: ATASSSGGRS PVVETGLFSS PDENQSEPGQ KAGFNWWKRR RLSFSMTWRR EPREDEVTKT STKPSEELEK PATEIPIEAN KWVMKDLVSR DGKSKLKSEV
301: YLASIDQRSE QAAGEAACAA VAVVVAHWFH ANPKLINPSG TAFDSLITQG SSLWQSLCDK ESYLRLFPNR HFDLETIVSA NLRPVRVCTD KSFTGLFSPE
401: RFASLDGLMS FDQIWDEVEK EVALASSNGE TRVYIVSWND HFFVVKADLD GFCVIDSLGE RLFEGCKQAY ILKFDDSSLM YEKEESSEKL VCEGKKCCRE
501: YIKSFLAAIP VAELAAKEEK GNVVDVSLLH ERLQIDLHHI ILTSSD
101: YGENMDAKNK KSLIGKASLD LSELASKQES TVERKLPIRS KGSVLSKEAT LVVNVTFSEV RTEPDDFMQL GQISVDSAIP KKKSTSRRGG GSHFDSFSSP
201: ATASSSGGRS PVVETGLFSS PDENQSEPGQ KAGFNWWKRR RLSFSMTWRR EPREDEVTKT STKPSEELEK PATEIPIEAN KWVMKDLVSR DGKSKLKSEV
301: YLASIDQRSE QAAGEAACAA VAVVVAHWFH ANPKLINPSG TAFDSLITQG SSLWQSLCDK ESYLRLFPNR HFDLETIVSA NLRPVRVCTD KSFTGLFSPE
401: RFASLDGLMS FDQIWDEVEK EVALASSNGE TRVYIVSWND HFFVVKADLD GFCVIDSLGE RLFEGCKQAY ILKFDDSSLM YEKEESSEKL VCEGKKCCRE
501: YIKSFLAAIP VAELAAKEEK GNVVDVSLLH ERLQIDLHHI ILTSSD
Arabidopsis Description
CONTAINS InterPro DOMAIN/s: C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G04860.1); Has 108 Blast hits to 69 proteins in 11 species: Archae - 0; Bacteria - 0; Meta /.../0; Fungi - 0; Plants - 108; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). [Source:TAIR;Acc:AT2G25460]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
SUBAcon: [mitochondrion,plastid,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.