Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- cytosol 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d009154_P001 | Maize | extracellular, plasma membrane, plastid | 28.1 | 40.41 |
| Zm00001d005562_P001 | Maize | plastid | 33.33 | 33.82 |
| KRH08491 | Soybean | cytosol | 16.19 | 24.29 |
| VIT_16s0039g02620.t01 | Wine grape | cytosol | 26.67 | 24.14 |
| TraesCS6D01G246000.1 | Wheat | plastid | 46.19 | 20.42 |
| TraesCS5D01G280600.1 | Wheat | plastid | 44.76 | 20.09 |
| TraesCS2D01G438800.1 | Wheat | nucleus | 41.43 | 17.86 |
| TraesCS5D01G193100.1 | Wheat | mitochondrion, nucleus | 37.62 | 16.6 |
| Bra037011.1-P | Field mustard | nucleus | 32.38 | 16.23 |
| VIT_15s0107g00320.t01 | Wine grape | nucleus | 34.76 | 16.22 |
| Bra005544.1-P | Field mustard | nucleus | 33.33 | 15.95 |
| PGSC0003DMT400069533 | Potato | nucleus, plastid | 33.81 | 15.6 |
| Solyc06g072830.2.1 | Tomato | nucleus, plastid | 33.33 | 15.38 |
| PGSC0003DMT400001467 | Potato | nucleus | 32.86 | 15.23 |
| AT4G33260.1 | Thale cress | nucleus | 32.38 | 15.21 |
| Solyc03g096870.2.1 | Tomato | nucleus | 32.38 | 15.01 |
| AT4G33270.1 | Thale cress | nucleus | 32.38 | 14.88 |
| Bra034555.1-P | Field mustard | nucleus | 26.67 | 14.78 |
| Solyc08g005420.2.1 | Tomato | nucleus | 31.43 | 14.73 |
| PGSC0003DMT400047585 | Potato | nucleus | 30.95 | 14.51 |
| AT5G27080.1 | Thale cress | nucleus | 29.52 | 14.03 |
| VIT_16s0039g02510.t01 | Wine grape | nucleus | 30.0 | 13.97 |
| AT5G26900.1 | Thale cress | nucleus | 29.52 | 13.96 |
| AT5G27570.1 | Thale cress | nucleus | 29.52 | 13.78 |
| VIT_05s0102g00640.t01 | Wine grape | nucleus | 26.67 | 13.56 |
| Bra008327.1-P | Field mustard | cytosol, mitochondrion | 27.62 | 13.55 |
| VIT_05s0102g00680.t01 | Wine grape | nucleus | 26.67 | 13.49 |
| VIT_05s0102g00550.t01 | Wine grape | nucleus | 26.19 | 13.32 |
| VIT_05s0029g01120.t01 | Wine grape | nucleus | 25.71 | 13.08 |
| Zm00001d006622_P001 | Maize | golgi | 17.14 | 10.65 |
| CDX98239 | Canola | nucleus | 6.67 | 10.45 |
| Bra011430.1-P | Field mustard | cytosol | 33.81 | 9.93 |
| TraesCS3D01G533000.1 | Wheat | plastid | 21.43 | 9.32 |
| TraesCS4D01G341200.1 | Wheat | nucleus, plastid | 20.95 | 8.59 |
| AT5G27945.1 | Thale cress | cytosol, plastid, vacuole | 14.76 | 7.24 |
| GSMUA_Achr2P19120_001 | Banana | cytosol | 5.24 | 4.12 |
| TraesCS2D01G438900.1 | Wheat | mitochondrion | 0.95 | 0.49 |
Protein Annotations
| EnsemblPlants:TraesCS2D01G118700.1 | EnsemblPlantsGene:TraesCS2D01G118700 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0006464 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009987 | GO:GO:0010997 | GO:GO:0019538 | GO:GO:0030234 | GO:GO:0097027 |
| GO:GO:1904668 | InterPro:Cdc20/Fizzy | PANTHER:PTHR19918 | PANTHER:PTHR19918:SF30 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr2D:-:68466875..68467507
Molecular Weight (calculated)
22834.7 Da
IEP (calculated)
10.397
GRAVY (calculated)
-0.344
Length
210 amino acids
Sequence
(BLAST)
(BLAST)
001: MRPDPAPTCR CSAPPRATSS AKCYGDRFIP DRSAMDMDMA HYLLTETKKD KENAAAIAAS PSKEAYRRLL AEKLLNNRTR ILALRNKPPE PENIFAADTG
101: FFSPGQAGQA EALHSPVCRE DSGCTGPRRR LLPQPDGLGE LAPTLFRMAL PRGHLRAGLS RRISSWSGFT AVSAVALSRP CLYTPLLSRV CTSKPPAPQR
201: VAIPAALLLR
101: FFSPGQAGQA EALHSPVCRE DSGCTGPRRR LLPQPDGLGE LAPTLFRMAL PRGHLRAGLS RRISSWSGFT AVSAVALSRP CLYTPLLSRV CTSKPPAPQR
201: VAIPAALLLR
001: MDAGMNNTSS HYKTQARCPL QEHFLPRKPS KENLDRFIPN RSAMNFDYAH FALTEGRKGK DQTAAVSSPS KEAYRKQLAE TMNLNHTRIL AFRNKPQAPV
101: ELLPSNHSAS LHQQPKSVKP RRYIPQTSER TLDAPDIVDD FYLNLLDWGS ANVLAIALDH TVYLWDASTG STSELVTIDE EKGPVTSINW APDGRHVAVG
201: LNNSEVQLWD SASNRQLRTL KGGHQSRVGS LAWNNHILTT GGMDGLIINN DVRIRSPIVE TYRGHTQEVC GLKWSGSGQQ LASGGNDNVV HIWDRSVASS
301: NSTTQWLHRL EEHTSAVKAL AWCPFQANLL ATGGGGGDRT IKFWNTHTGA CLNSVDTGSQ VCSLLWSKNE RELLSSHGFT QNQLTLWKYP SMVKMAELTG
401: HTSRVLYMAQ SPDGCTVASA AGDETLRFWN VFGVPETAKK AAPKAVSEPF SHVNRIR
101: ELLPSNHSAS LHQQPKSVKP RRYIPQTSER TLDAPDIVDD FYLNLLDWGS ANVLAIALDH TVYLWDASTG STSELVTIDE EKGPVTSINW APDGRHVAVG
201: LNNSEVQLWD SASNRQLRTL KGGHQSRVGS LAWNNHILTT GGMDGLIINN DVRIRSPIVE TYRGHTQEVC GLKWSGSGQQ LASGGNDNVV HIWDRSVASS
301: NSTTQWLHRL EEHTSAVKAL AWCPFQANLL ATGGGGGDRT IKFWNTHTGA CLNSVDTGSQ VCSLLWSKNE RELLSSHGFT QNQLTLWKYP SMVKMAELTG
401: HTSRVLYMAQ SPDGCTVASA AGDETLRFWN VFGVPETAKK AAPKAVSEPF SHVNRIR
Arabidopsis Description
CDC20-1Cell division cycle 20.1, cofactor of APC complex [Source:UniProtKB/Swiss-Prot;Acc:Q9SZA4]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.