Factsheet for GSMUA_Achr8P14580_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 4
cytosol 2
nucleus 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	plastid	88.15	89.45
GSMUA_Achr5P18020_001	Banana	nucleus, plastid	87.32	88.79
TraesCS5D01G193100.1	Wheat	mitochondrion, nucleus	69.44	70.17
TraesCS5A01G197800.2	Wheat	mitochondrion, plastid	69.44	70.17
TraesCS5B01G185900.1	Wheat	mitochondrion, nucleus	69.23	69.96
Os09t0242300-00	Rice	plastid	65.07	65.48
HORVU5Hr1G041780.3	Barley	plastid	68.4	60.81
GSMUA_AchrUn_...	Banana	cytosol	10.81	59.77
GSMUA_Achr1P27660_001	Banana	mitochondrion	19.96	59.63
GSMUA_AchrUn_...	Banana	cytosol	27.86	56.07
GSMUA_Achr1P27670_001	Banana	cytosol	7.28	55.56
GSMUA_Achr1P25940_001	Banana	cytosol	32.85	53.2
GSMUA_Achr3P21370_001	Banana	cytosol	42.83	51.89
GSMUA_AchrUn_...	Banana	nucleus	44.07	51.58
GSMUA_AchrUn_...	Banana	cytosol	36.8	48.63
KRH08491	Soybean	cytosol	14.14	48.57
GSMUA_Achr1P28050_001	Banana	cytosol	40.96	48.4
GSMUA_AchrUn_...	Banana	cytosol	29.94	47.21
GSMUA_Achr10P...	Banana	nucleus	39.92	47.17
CDX98239	Canola	nucleus	11.85	42.54
GSMUA_Achr11P...	Banana	mitochondrion	37.01	42.18
GSMUA_Achr5P07090_001	Banana	plastid	38.46	40.75
GSMUA_Achr11P...	Banana	plastid	38.25	37.86
GSMUA_AchrUn_...	Banana	cytosol	21.83	36.71
GSMUA_Achr11P...	Banana	plastid	35.14	34.42
GSMUA_Achr2P19120_001	Banana	cytosol	16.84	30.34

Protein Annotations

MapMan:13.3.4.1.4	Gene3D:2.130.10.10	InterPro:Apc4_WD40_dom	InterPro:Cdc20/Fizzy	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0010997
GO:GO:0019538	GO:GO:0030234	GO:GO:0097027	GO:GO:1904668	EnsemblPlantsGene:GSMUA_Achr8G14580_001	EnsemblPlants:GSMUA_Achr8P14580_001
EnsemblPlants:GSMUA_Achr8T14580_001	InterPro:IPR001680	InterPro:IPR015943	InterPro:IPR017986	UniProt:M0TQG1	PFAM:PF00400
PFAM:PF12894	ScanProsite:PS00678	PFscan:PS50082	PFscan:PS50294	PANTHER:PTHR19918	PANTHER:PTHR19918:SF30
InterPro:Quinoprotein_ADH-like_supfam	SMART:SM00320	SUPFAM:SSF50998	UniParc:UPI0002967AF3	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat
InterPro:WD40_repeat_CS	InterPro:WD40_repeat_dom	SEG:seg	:	:	:

Description

Putative Anaphase-promoting complex subunit cdc20 [Source:GMGC_GENE;Acc:GSMUA_Achr8G14580_001]

Coordinates

chr8:-:11959042..11961214

Molecular Weight (calculated)

52927.1 Da

IEP (calculated)

8.966

GRAVY (calculated)

-0.453

Length

481 amino acids

Sequence
(BLAST)

001: MDAGSSSSSI SSEKRRMSSR RPLQDVPSRP FLPSMHTTSR NPSWRQSVSH VLLLFGDRFI PDRSAMDMDV AYYLLTQTRK EKENAVPASP SKEAYRKLLA
101: ENLLKNRTRI LAFHSKPPEP SRPFFQEADA VSPHHAKPAK QRRYIPQSAD RTLDAPDIVD DYYLNLLDWG TGNVLSIALG NTVYLWDASD GSTSELVTVD
201: DDAGPVTSVS WAPDGRHIAV GLNSSDVQLW DSASNRLLRT LRGVHGSRVG SLAWNNNILS TGGMDGKIVN NDVRVRSHVV QTYRGHQQEV CGLKWSGSGQ
301: QLASGGNDNL VHIWDVSMAS ANPPRGQNQW FHRLDDHMAA VKALAWCPFQ SNLLASGGGG GDRCIKFWNT HTGACLNSVD TGSQVCSLLW NKKERELLSS
401: HGFTQNQLTL WKYPSMVRIA ELTGHTSRVL FMAQSPDGCT VASAAGDETL RFWNVFGTPE AAKPAAKSGN AGPFSSFNHI R

Best Arabidopsis Sequence Match ( AT4G33270.1 )
(BLAST)

001: MDAGMNNTSS HYKTQARCPL QEHFLPRKPS KENLDRFIPN RSAMNFDYAH FALTEGRKGK DQTAAVSSPS KEAYRKQLAE TMNLNHTRIL AFRNKPQAPV
101: ELLPSNHSAS LHQQPKSVKP RRYIPQTSER TLDAPDIVDD FYLNLLDWGS ANVLAIALDH TVYLWDASTG STSELVTIDE EKGPVTSINW APDGRHVAVG
201: LNNSEVQLWD SASNRQLRTL KGGHQSRVGS LAWNNHILTT GGMDGLIINN DVRIRSPIVE TYRGHTQEVC GLKWSGSGQQ LASGGNDNVV HIWDRSVASS
301: NSTTQWLHRL EEHTSAVKAL AWCPFQANLL ATGGGGGDRT IKFWNTHTGA CLNSVDTGSQ VCSLLWSKNE RELLSSHGFT QNQLTLWKYP SMVKMAELTG
401: HTSRVLYMAQ SPDGCTVASA AGDETLRFWN VFGVPETAKK AAPKAVSEPF SHVNRIR

Arabidopsis Description

CDC20-1Cell division cycle 20.1, cofactor of APC complex [Source:UniProtKB/Swiss-Prot;Acc:Q9SZA4]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.