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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 2
  • nucleus 1
  • mitochondrion 1
  • cytosol 3
PPI
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_AchrUn_... Banana cytosol 27.61 94.25
GSMUA_Achr1P27660_001 Banana mitochondrion 50.84 93.79
GSMUA_AchrUn_... Banana cytosol 75.42 93.72
GSMUA_Achr1P27670_001 Banana cytosol 19.87 93.65
GSMUA_AchrUn_... Banana cytosol 68.35 66.56
GSMUA_AchrUn_... Banana nucleus 90.57 65.45
CDY26774 Canola mitochondrion 20.88 56.36
CDY59111 Canola nucleus 38.05 52.31
GSMUA_AchrUn_... Banana cytosol 61.28 50.0
GSMUA_Achr3P21370_001 Banana cytosol 66.33 49.62
GSMUA_Achr1P28050_001 Banana cytosol 67.68 49.39
KRG94456 Soybean cytosol 35.69 45.11
CDY71694 Canola nucleus 24.92 42.77
CDY28289 Canola cytosol, extracellular, mitochondrion, plastid 25.93 39.9
CDY13491 Canola cytosol 44.78 36.14
AT4G33260.1 Thale cress nucleus 52.19 34.68
AT5G27945.1 Thale cress cytosol, plastid, vacuole 49.49 34.35
Bra034555.1-P Field mustard nucleus 43.43 34.04
KRH44738 Soybean nucleus 50.51 33.94
AT4G33270.1 Thale cress nucleus 52.19 33.92
GSMUA_Achr5P18020_001 Banana nucleus, plastid 53.87 33.83
AT5G27570.1 Thale cress nucleus 50.17 33.11
Bra005544.1-P Field mustard nucleus 48.82 33.03
Bra008327.1-P Field mustard cytosol, mitochondrion 47.47 32.94
GSMUA_Achr8P14580_001 Banana nucleus, plastid 53.2 32.85
GSMUA_Achr11P... Banana plastid 52.19 32.7
KRH68047 Soybean nucleus 50.17 32.6
AT5G27080.1 Thale cress nucleus 47.81 32.13
CDY52543 Canola nucleus 46.13 32.01
AT5G26900.1 Thale cress nucleus 47.81 31.98
Solyc08g005420.2.1 Tomato nucleus 47.81 31.7
Bra037011.1-P Field mustard nucleus 44.44 31.5
PGSC0003DMT400047585 Potato nucleus 47.47 31.47
CDY59110 Canola nucleus 43.77 31.03
CDY59109 Canola nucleus 43.77 31.03
CDX68960 Canola nucleus 41.75 30.02
GSMUA_Achr10P... Banana nucleus 40.07 29.24
CDY44519 Canola cytosol, nucleus 48.15 27.55
GSMUA_AchrUn_... Banana cytosol 26.26 27.27
GSMUA_Achr11P... Banana mitochondrion 36.7 25.83
GSMUA_Achr5P07090_001 Banana plastid 36.7 24.01
GSMUA_Achr11P... Banana plastid 36.36 22.22
Bra011430.1-P Field mustard cytosol 51.52 21.4
GSMUA_Achr2P19120_001 Banana cytosol 19.19 21.35
GSMUA_Achr11P... Banana plastid 33.33 20.16
CDY46124 Canola cytosol 36.36 17.42
KRH07005 Soybean nucleus 0.67 1.61
CDY28290 Canola cytosol, mitochondrion, nucleus 0.34 0.68
Protein Annotations
Gene3D:2.130.10.10MapMan:35.1InterPro:Apc4_WD40_domInterPro:Cdc20/FizzyGO:GO:0003674GO:GO:0005488
GO:GO:0005515GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0010997
GO:GO:0019538GO:GO:0030234GO:GO:0097027GO:GO:1904668EnsemblPlantsGene:GSMUA_Achr1G25940_001EnsemblPlants:GSMUA_Achr1P25940_001
EnsemblPlants:GSMUA_Achr1T25940_001InterPro:IPR001680InterPro:IPR015943InterPro:IPR017986UniProt:M0S351PFAM:PF00400
PFAM:PF12894ScanProsite:PS00678PFscan:PS50082PFscan:PS50294PANTHER:PTHR19918PANTHER:PTHR19918:SF12
SMART:SM00320SUPFAM:SSF50978UniParc:UPI000295782BInterPro:WD40/YVTN_repeat-like_dom_sfInterPro:WD40_repeatInterPro:WD40_repeat_CS
InterPro:WD40_repeat_domInterPro:WD40_repeat_dom_sf::::
Description
Putative Anaphase-promoting complex subunit cdc20 [Source:GMGC_GENE;Acc:GSMUA_Achr1G25940_001]
Coordinates
chr1:+:20329045..20331139
Molecular Weight (calculated)
32961.1 Da
IEP (calculated)
8.171
GRAVY (calculated)
-0.196
Length
297 amino acids
Sequence
(BLAST)
001: MICFHLYFRL EFFSRALENN SPVTSISWSP DGKVLAVAFG NSDLDLVDAA TGRLLVGIQG DSHSFVCSLA WRSNAILTTG KSDGSVVDYD IRKDDRAICD
101: YKGHRLEVCS LKWSELFGRY LASGGKDKLV HIWDARMAVA NHHPCQHQLL HKINNHTSTV RALDWCPTRS NLLASGGGRN DHCIKFWNAA NGVCLNSIDT
201: GSEVCALLWD KNKSELLTSH GFPNNQLTLW NYTSMTRKAE LFGHSSRVLY LAGSPLGGVV ASAAEDETLK FWNVFETPKP PKPKANTMPF AQFSVIR
Best Arabidopsis Sequence Match ( AT4G33260.1 )
(BLAST)
001: MDAGLNRCPL QEHFLPRKNS KENLDRFIPN RSAMNFDYAH FALTEERKGK DQSATVSSPS KEAYRKQLAE TMNLNHTRIL AFRNKPQAPV ELLPSNHSAS
101: LHQQPKSVKP RRYIPQTSER TLDAPDIVDD FYLNLLDWGS ANVLAIALDH TVYLWDASTG STSELVTIDE EKGPVTSINW APDGRHVAVG LNNSEVQLWD
201: SASNRQLRTL KGGHQSRVGS LAWNNHILTT GGMDGLIINN DVRIRSPIVE TYRGHTQEVC GLKWSGSGQQ LASGGNDNVV HIWDRSVASS NSTTQWLHRL
301: EEHTSAVKAL AWCPFQANLL ATGGGGGDRT IKFWNTHTGA CLNSVDTGSQ VCSLLWSKNE RELLSSHGFT QNQLTLWKYP SMVKMAELTG HTSRVLYMAQ
401: SPDGCTVASA AGDETLRFWN VFGVPETAKK AAPKAVAEPF SHVNRIR
Arabidopsis Description
CDC20-2Cell division cycle 20.2, cofactor of APC complex [Source:UniProtKB/Swiss-Prot;Acc:Q9S7I8]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.