Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G083840.8 | Barley | cytosol | 47.66 | 79.73 |
| KRH32716 | Soybean | golgi | 23.77 | 72.73 |
| VIT_01s0026g02730.t01 | Wine grape | cytosol | 73.26 | 72.59 |
| Os04t0484800-01 | Rice | cytosol | 70.63 | 71.53 |
| TraesCS2A01G321000.1 | Wheat | cytosol | 70.06 | 71.28 |
| TraesCS2D01G341700.1 | Wheat | cytosol | 69.94 | 71.16 |
| TraesCS2B01G361700.1 | Wheat | cytosol | 69.83 | 71.05 |
| KXG20781 | Sorghum | cytosol | 69.37 | 70.66 |
| HORVU0Hr1G004980.2 | Barley | cytosol | 27.66 | 70.55 |
| Zm00001d014685_P009 | Maize | cytosol | 68.69 | 69.88 |
| HORVU0Hr1G004870.2 | Barley | cytosol | 18.51 | 69.53 |
| KRG97883 | Soybean | cytosol | 68.57 | 67.8 |
| KRH30995 | Soybean | cytosol | 67.89 | 67.19 |
| PGSC0003DMT400047444 | Potato | cytosol | 67.54 | 66.86 |
| Solyc05g007750.2.1 | Tomato | cytosol | 67.31 | 66.7 |
| AT2G04660.1 | Thale cress | cytosol | 65.26 | 66.01 |
| CDY04835 | Canola | cytosol | 63.89 | 65.53 |
| Bra028905.1-P | Field mustard | cytosol | 64.0 | 65.42 |
| Bra025616.1-P | Field mustard | cytosol | 62.06 | 65.19 |
| CDY30835 | Canola | cytosol | 62.17 | 64.92 |
| CDY30292 | Canola | cytosol | 61.6 | 63.64 |
| HORVU0Hr1G004910.1 | Barley | cytosol | 7.54 | 53.23 |
| KRH74904 | Soybean | cytosol, extracellular, peroxisome | 4.91 | 40.19 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | Gene3D:1.20.1310.10 | MapMan:13.3.4.1.1.3.1 | InterPro:APC_su2_C | InterPro:Cullin_N |
| InterPro:Cullin_homology | InterPro:Cullin_homology_sf | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005819 | GO:GO:0005856 | GO:GO:0006511 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009561 | GO:GO:0009987 |
| GO:GO:0019538 | GO:GO:0031625 | EnsemblPlantsGene:GSMUA_Achr3G19380_001 | EnsemblPlants:GSMUA_Achr3P19380_001 | EnsemblPlants:GSMUA_Achr3T19380_001 | InterPro:IPR016158 |
| InterPro:IPR036388 | UniProt:M0SG04 | PFAM:PF00888 | PFAM:PF08672 | PFscan:PS50069 | PANTHER:PTHR11932 |
| PANTHER:PTHR11932:SF5 | SMART:SM00182 | SMART:SM01013 | SUPFAM:SSF46785 | SUPFAM:SSF75632 | UniParc:UPI0002954025 |
| InterPro:WH-like_DNA-bd_sf | InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : |
Description
Anaphase-promoting complex subunit 2 [Source:GMGC_GENE;Acc:GSMUA_Achr3G19380_001]
Coordinates
chr3:+:20736592..20749650
Molecular Weight (calculated)
98213.9 Da
IEP (calculated)
4.505
GRAVY (calculated)
-0.260
Length
875 amino acids
Sequence
(BLAST)
(BLAST)
001: MLWDPEALDS LDDAAIGDVL QSWASFCDCT DALLCGRGDL SAGADLVPLV ATLCGYGLCS LVQDHFLHSL EELFKSNAVL KFWKHFDAFS DASKLGTTDF
101: QENWTEEVLS KSLEEICLEK HYQEKCLLML VHALQSFDES ITDEKMKIQD YRSSLTSKYQ LMVSSILLTT VPMHFPGILR SYFKEKLEEL SNMMAVGPEE
201: DGCEFQFSNN RLGQPSQRPI GVGEMDIDTC YHGSTFAKNN TLVNNIGKVV CDLRNLGFTS MTEDAYASSI LLLLKHKVHD LAGDDYRTPV LGSIKDWIQA
301: VPLQFLHALL VYLGDSPAQD DESSGLKSPL ASSPSYPGIE MPSEGLVRWQ LRLEYFAYET LQDLRIGKLF EIIVDYPESS PAIEDLKQCL EYTGQHSKLV
401: DSFISSLRYR LLTAGASTND ILHQYVSTIK ALRTIDPTGV FLEAVGEPIR DYLRGRKDTI KCIVTMLTDG SGGNSTGAGN SGDSLLEELN RDAENQESAD
501: YDDDTNLDDK QAWINAERWE PDPVEADPSK GSRNRRKIDI LGMIVGIIGS KDQLVNEYRV MLAEKLLNKS DYDIDSEIRT LELLKIHFGE GSMQKCEIML
601: NDLIDSKRTN ANIKASILQP PAPGSEQEET CLSLDHLDST IISSNFWPTI QAESLNIPTA VEQLLSDYAR RFHEIKTPRK LLWKKNLGTV KLELQFEDTS
701: MQFTVSPMHA VIIMQFQEQT SWTSKNLAAS IGVPIDTLNK RINFWISKGV LAESVGSDSD NHIFTIVSDM VDPNKTGINN TRCEGILAMD EECERSVASV
801: EEQLRKEMTV YEKFIVGMLT NFGSMTLDRI HNTLKMFCVA EPSYDKSLQQ LQNFLSGLIS EEKLEMREGL YILKK
101: QENWTEEVLS KSLEEICLEK HYQEKCLLML VHALQSFDES ITDEKMKIQD YRSSLTSKYQ LMVSSILLTT VPMHFPGILR SYFKEKLEEL SNMMAVGPEE
201: DGCEFQFSNN RLGQPSQRPI GVGEMDIDTC YHGSTFAKNN TLVNNIGKVV CDLRNLGFTS MTEDAYASSI LLLLKHKVHD LAGDDYRTPV LGSIKDWIQA
301: VPLQFLHALL VYLGDSPAQD DESSGLKSPL ASSPSYPGIE MPSEGLVRWQ LRLEYFAYET LQDLRIGKLF EIIVDYPESS PAIEDLKQCL EYTGQHSKLV
401: DSFISSLRYR LLTAGASTND ILHQYVSTIK ALRTIDPTGV FLEAVGEPIR DYLRGRKDTI KCIVTMLTDG SGGNSTGAGN SGDSLLEELN RDAENQESAD
501: YDDDTNLDDK QAWINAERWE PDPVEADPSK GSRNRRKIDI LGMIVGIIGS KDQLVNEYRV MLAEKLLNKS DYDIDSEIRT LELLKIHFGE GSMQKCEIML
601: NDLIDSKRTN ANIKASILQP PAPGSEQEET CLSLDHLDST IISSNFWPTI QAESLNIPTA VEQLLSDYAR RFHEIKTPRK LLWKKNLGTV KLELQFEDTS
701: MQFTVSPMHA VIIMQFQEQT SWTSKNLAAS IGVPIDTLNK RINFWISKGV LAESVGSDSD NHIFTIVSDM VDPNKTGINN TRCEGILAMD EECERSVASV
801: EEQLRKEMTV YEKFIVGMLT NFGSMTLDRI HNTLKMFCVA EPSYDKSLQQ LQNFLSGLIS EEKLEMREGL YILKK
001: MEALGSSDCN LEILETLSDD AIQEITESYD GFFTTVESLI AGTGDSLVED EFVSHVYCLC KYGLDSLVRD HFLRSLEQAF EKGGASSFWQ HFDAYSEKKH
101: HNYGEEIQIV LCKALEEISI EKQYHEKCLS IVVHALQSFK EQSSDDRQNS DTERVHLFSR FQSMLSSTLM TTLPQHFPEI LHWYFKERLE ELSAIMDGDG
201: IEEQEDDCMD LDEKLRYKNG EMDVDEGCSQ GKRLGHDKLV KNIGKVVRDL RSIGFTSMAE NAYASAIFLL LKAKVHDLAG DDYRTSVLES IKEWIQTVPL
301: QFLNALLSYL GDSVSYGTTS SGLTSPLACC PSPSFSRVVT PSEGIVRWKL RLEYFAYETL QDLRIAKLFE IIVDYPESSP AIEDLKQCLE YTGQHSKLVE
401: SFISSLKYRL LTAGASTNDI LHQYVSTIKA LRAIDPAGVF LEAVGEPIRD YLRGRKDTIK CIVTMLTDGS GGNANGSGNP GDSLLEELMR DEESQENVGF
501: DDDFHTDDKQ AWINASRWEP DPVEADPLKG SLSQRKVDIL GMLVDIIGSK EQLVNEYRVM LAEKLLNKTD YDIDTEIRTV ELLKIHFGEA SMQRCEIMLN
601: DLIDSKRVNT NIKKASQTGA ELRENELSVD TLTSTILSTN FWPPIQDEPL ELPGPVDKLL SDYANRYHEI KTPRKLLWKK NLGTVKLELQ FEDRAMQFTV
701: SPTHAAIIMQ FQEKKSWTYK DLAEVIGIPI DALNRRVNFW ISKGVLREST GANSNSSVLT LVESITDSGK NEGEELLTGE EEGETSIASV EDQLRKEMTI
801: YEKFIMGMLT NFGSMALERI HNTLKMFCVA DPSYDKSLQQ LQSFLSGLVS EEKLEFRDGM YLLKK
101: HNYGEEIQIV LCKALEEISI EKQYHEKCLS IVVHALQSFK EQSSDDRQNS DTERVHLFSR FQSMLSSTLM TTLPQHFPEI LHWYFKERLE ELSAIMDGDG
201: IEEQEDDCMD LDEKLRYKNG EMDVDEGCSQ GKRLGHDKLV KNIGKVVRDL RSIGFTSMAE NAYASAIFLL LKAKVHDLAG DDYRTSVLES IKEWIQTVPL
301: QFLNALLSYL GDSVSYGTTS SGLTSPLACC PSPSFSRVVT PSEGIVRWKL RLEYFAYETL QDLRIAKLFE IIVDYPESSP AIEDLKQCLE YTGQHSKLVE
401: SFISSLKYRL LTAGASTNDI LHQYVSTIKA LRAIDPAGVF LEAVGEPIRD YLRGRKDTIK CIVTMLTDGS GGNANGSGNP GDSLLEELMR DEESQENVGF
501: DDDFHTDDKQ AWINASRWEP DPVEADPLKG SLSQRKVDIL GMLVDIIGSK EQLVNEYRVM LAEKLLNKTD YDIDTEIRTV ELLKIHFGEA SMQRCEIMLN
601: DLIDSKRVNT NIKKASQTGA ELRENELSVD TLTSTILSTN FWPPIQDEPL ELPGPVDKLL SDYANRYHEI KTPRKLLWKK NLGTVKLELQ FEDRAMQFTV
701: SPTHAAIIMQ FQEKKSWTYK DLAEVIGIPI DALNRRVNFW ISKGVLREST GANSNSSVLT LVESITDSGK NEGEELLTGE EEGETSIASV EDQLRKEMTI
801: YEKFIMGMLT NFGSMALERI HNTLKMFCVA DPSYDKSLQQ LQSFLSGLVS EEKLEFRDGM YLLKK
Arabidopsis Description
APC2APC2 [Source:UniProtKB/TrEMBL;Acc:A0A178VYA9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.