Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra028905.1-P | Field mustard | cytosol | 98.24 | 97.9 |
| AT2G04660.1 | Thale cress | cytosol | 87.22 | 86.01 |
| CDY30292 | Canola | cytosol | 82.53 | 83.12 |
| CDY30835 | Canola | cytosol | 80.42 | 81.86 |
| KRH32716 | Soybean | golgi | 24.27 | 72.38 |
| HORVU2Hr1G083840.8 | Barley | cytosol | 43.85 | 71.51 |
| VIT_01s0026g02730.t01 | Wine grape | cytosol | 70.57 | 68.18 |
| KRH30995 | Soybean | cytosol | 68.58 | 66.18 |
| KRG97883 | Soybean | cytosol | 68.58 | 66.1 |
| PGSC0003DMT400047444 | Potato | cytosol | 67.29 | 64.93 |
| Solyc05g007750.2.1 | Tomato | cytosol | 67.06 | 64.78 |
| GSMUA_Achr3P19380_001 | Banana | cytosol | 65.53 | 63.89 |
| HORVU0Hr1G004980.2 | Barley | cytosol | 25.32 | 62.97 |
| HORVU0Hr1G004870.2 | Barley | cytosol | 16.88 | 61.8 |
| KXG20781 | Sorghum | cytosol | 61.9 | 61.47 |
| Os04t0484800-01 | Rice | cytosol | 62.13 | 61.34 |
| TraesCS2A01G321000.1 | Wheat | cytosol | 61.43 | 60.93 |
| TraesCS2D01G341700.1 | Wheat | cytosol | 61.2 | 60.7 |
| Zm00001d014685_P009 | Maize | cytosol | 61.08 | 60.58 |
| TraesCS2B01G361700.1 | Wheat | cytosol | 61.08 | 60.58 |
| KRH74904 | Soybean | cytosol, extracellular, peroxisome | 5.28 | 42.06 |
| HORVU0Hr1G004910.1 | Barley | cytosol | 4.69 | 32.26 |
Protein Annotations
| Gene3D:1.10.10.10 | Gene3D:1.10.10.2620 | MapMan:13.3.4.1.1.3.1 | GO:A0A078ESC2 | InterPro:APC_su2_C | EnsemblPlants:CDY04835 |
| ProteinID:CDY04835 | ProteinID:CDY04835.1 | InterPro:Cullin_N | InterPro:Cullin_homology | InterPro:Cullin_homology_sf | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006511 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 |
| GO:GO:0009987 | GO:GO:0019538 | GO:GO:0031625 | EnsemblPlantsGene:GSBRNA2T00119547001 | InterPro:IPR016158 | InterPro:IPR036388 |
| PFAM:PF00888 | PFAM:PF08672 | PFscan:PS50069 | PANTHER:PTHR11932 | PANTHER:PTHR11932:SF5 | SMART:SM00182 |
| SMART:SM01013 | SUPFAM:SSF46785 | SUPFAM:SSF75632 | UniPathway:UPA00143 | UniParc:UPI0004EDDCC3 | InterPro:WH-like_DNA-bd_sf |
| InterPro:WH_DNA-bd_sf | SEG:seg | : | : | : | : |
Description
BnaAnng00170D
Coordinates
chrLK031958:-:174489..178771
Molecular Weight (calculated)
96117.1 Da
IEP (calculated)
4.542
GRAVY (calculated)
-0.313
Length
853 amino acids
Sequence
(BLAST)
(BLAST)
001: MELLGECNLG ILETLSEDAI EEITESYGGF FTTVEALIGG DSSVEQELVS HVSTLCKYGL ASLVRDHFLS SLQEAFDKGG ASTFWLHFDD FRHKQHTDYG
101: EEIHEALCGA LEEITIEKQF HDKCLSILFH ALHSFQQQSS EATIMHNSDS ERVELFSTFR SMLSSTLMTT LPPHFPEILH WYFKEKLEEL SAIMNEDDTQ
201: QLESDGMDLD DKLRSKNGEM DVDEGFSRHD ELVKNIGKVV RDLRSIGFTS MAENAYASAI FLLLKAKVHD LAGDDYRTSV LGSIKQWIQT VPLQFLNALL
301: SFLGDSVRYD TTPSGLTSPL ACCPSPSFSK VVTPSEGIVR WKLRLEYFAY ETLQDLRIAK LFEIIVDYPE SSPAIEDLKQ CLEYTGQHSK LVESFISSLK
401: YRLLTAGAST NDILHQYVST IKALRAIDPA GVFLEAVGEP IRDYLRGRKD TIKCVVTMLT DGSGGNANGS GNPGDSLLEE LMRDEESQEN VGFDDDFHTD
501: DKQAWINASR WEPDPVEADP LKGSLSQRKV DILGMLVDII GSKEQLVNEY RVMLAEKLLN KTDYDIDTEI RTIHFGEGSM QRCEIMLNDL IDSKRVNTNI
601: KKASQTGTEL GESELSVDIL TSTILSTNFW PPIQEEPLVL PGPVDKLLSD YASRYHEIKT PRKLLWKKNL GTVKLELEFE DRAMQFTVSP THAAIIMQFQ
701: EKKSWNSIDL GAATGIPIDV LNRRVNLWIS KGVLRETRGR EPNGNVYTLV ESMTDSGKNE SEELLGGDEE SERSIASVED QLRKEMTIYE KFIMGMLTNF
801: GSMALERIHN TLKMFCVADP SYDKSLQQLQ SFLSGLVSEE KLEFRDGMYL LKK
101: EEIHEALCGA LEEITIEKQF HDKCLSILFH ALHSFQQQSS EATIMHNSDS ERVELFSTFR SMLSSTLMTT LPPHFPEILH WYFKEKLEEL SAIMNEDDTQ
201: QLESDGMDLD DKLRSKNGEM DVDEGFSRHD ELVKNIGKVV RDLRSIGFTS MAENAYASAI FLLLKAKVHD LAGDDYRTSV LGSIKQWIQT VPLQFLNALL
301: SFLGDSVRYD TTPSGLTSPL ACCPSPSFSK VVTPSEGIVR WKLRLEYFAY ETLQDLRIAK LFEIIVDYPE SSPAIEDLKQ CLEYTGQHSK LVESFISSLK
401: YRLLTAGAST NDILHQYVST IKALRAIDPA GVFLEAVGEP IRDYLRGRKD TIKCVVTMLT DGSGGNANGS GNPGDSLLEE LMRDEESQEN VGFDDDFHTD
501: DKQAWINASR WEPDPVEADP LKGSLSQRKV DILGMLVDII GSKEQLVNEY RVMLAEKLLN KTDYDIDTEI RTIHFGEGSM QRCEIMLNDL IDSKRVNTNI
601: KKASQTGTEL GESELSVDIL TSTILSTNFW PPIQEEPLVL PGPVDKLLSD YASRYHEIKT PRKLLWKKNL GTVKLELEFE DRAMQFTVSP THAAIIMQFQ
701: EKKSWNSIDL GAATGIPIDV LNRRVNLWIS KGVLRETRGR EPNGNVYTLV ESMTDSGKNE SEELLGGDEE SERSIASVED QLRKEMTIYE KFIMGMLTNF
801: GSMALERIHN TLKMFCVADP SYDKSLQQLQ SFLSGLVSEE KLEFRDGMYL LKK
001: MEALGSSDCN LEILETLSDD AIQEITESYD GFFTTVESLI AGTGDSLVED EFVSHVYCLC KYGLDSLVRD HFLRSLEQAF EKGGASSFWQ HFDAYSEKKH
101: HNYGEEIQIV LCKALEEISI EKQYHEKCLS IVVHALQSFK EQSSDDRQNS DTERVHLFSR FQSMLSSTLM TTLPQHFPEI LHWYFKERLE ELSAIMDGDG
201: IEEQEDDCMD LDEKLRYKNG EMDVDEGCSQ GKRLGHDKLV KNIGKVVRDL RSIGFTSMAE NAYASAIFLL LKAKVHDLAG DDYRTSVLES IKEWIQTVPL
301: QFLNALLSYL GDSVSYGTTS SGLTSPLACC PSPSFSRVVT PSEGIVRWKL RLEYFAYETL QDLRIAKLFE IIVDYPESSP AIEDLKQCLE YTGQHSKLVE
401: SFISSLKYRL LTAGASTNDI LHQYVSTIKA LRAIDPAGVF LEAVGEPIRD YLRGRKDTIK CIVTMLTDGS GGNANGSGNP GDSLLEELMR DEESQENVGF
501: DDDFHTDDKQ AWINASRWEP DPVEADPLKG SLSQRKVDIL GMLVDIIGSK EQLVNEYRVM LAEKLLNKTD YDIDTEIRTV ELLKIHFGEA SMQRCEIMLN
601: DLIDSKRVNT NIKKASQTGA ELRENELSVD TLTSTILSTN FWPPIQDEPL ELPGPVDKLL SDYANRYHEI KTPRKLLWKK NLGTVKLELQ FEDRAMQFTV
701: SPTHAAIIMQ FQEKKSWTYK DLAEVIGIPI DALNRRVNFW ISKGVLREST GANSNSSVLT LVESITDSGK NEGEELLTGE EEGETSIASV EDQLRKEMTI
801: YEKFIMGMLT NFGSMALERI HNTLKMFCVA DPSYDKSLQQ LQSFLSGLVS EEKLEFRDGM YLLKK
101: HNYGEEIQIV LCKALEEISI EKQYHEKCLS IVVHALQSFK EQSSDDRQNS DTERVHLFSR FQSMLSSTLM TTLPQHFPEI LHWYFKERLE ELSAIMDGDG
201: IEEQEDDCMD LDEKLRYKNG EMDVDEGCSQ GKRLGHDKLV KNIGKVVRDL RSIGFTSMAE NAYASAIFLL LKAKVHDLAG DDYRTSVLES IKEWIQTVPL
301: QFLNALLSYL GDSVSYGTTS SGLTSPLACC PSPSFSRVVT PSEGIVRWKL RLEYFAYETL QDLRIAKLFE IIVDYPESSP AIEDLKQCLE YTGQHSKLVE
401: SFISSLKYRL LTAGASTNDI LHQYVSTIKA LRAIDPAGVF LEAVGEPIRD YLRGRKDTIK CIVTMLTDGS GGNANGSGNP GDSLLEELMR DEESQENVGF
501: DDDFHTDDKQ AWINASRWEP DPVEADPLKG SLSQRKVDIL GMLVDIIGSK EQLVNEYRVM LAEKLLNKTD YDIDTEIRTV ELLKIHFGEA SMQRCEIMLN
601: DLIDSKRVNT NIKKASQTGA ELRENELSVD TLTSTILSTN FWPPIQDEPL ELPGPVDKLL SDYANRYHEI KTPRKLLWKK NLGTVKLELQ FEDRAMQFTV
701: SPTHAAIIMQ FQEKKSWTYK DLAEVIGIPI DALNRRVNFW ISKGVLREST GANSNSSVLT LVESITDSGK NEGEELLTGE EEGETSIASV EDQLRKEMTI
801: YEKFIMGMLT NFGSMALERI HNTLKMFCVA DPSYDKSLQQ LQSFLSGLVS EEKLEFRDGM YLLKK
Arabidopsis Description
APC2APC2 [Source:UniProtKB/TrEMBL;Acc:A0A178VYA9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.