CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G269100.1	Wheat	cytosol	17.6	78.01
TraesCS1D01G258400.1	Wheat	cytosol	18.88	76.62
TraesCS4A01G069400.1	Wheat	cytosol	18.88	76.62
TraesCS4D01G138800.1	Wheat	cytosol	18.88	76.62
TraesCS1A01G156900.1	Wheat	cytosol	18.72	75.97
TraesCS1B01G262900.1	Wheat	cytosol	18.72	75.97
TraesCS3B01G013700.1	Wheat	cytosol	18.72	75.97
TraesCS1B01G385800.1	Wheat	cytosol	18.72	75.97
TraesCSU01G157900.1	Wheat	cytosol	18.72	75.97
Solyc09g009360.1.1	Tomato	cytosol, endoplasmic reticulum, nucleus, plastid	21.76	75.56
TraesCS4D01G160900.1	Wheat	cytosol	13.76	75.44
TraesCS4B01G146100.1	Wheat	cytosol	18.56	75.32
TraesCS7A01G526400.1	Wheat	cytosol	18.56	75.32
TraesCS7D01G075700.1	Wheat	cytosol	18.56	75.32
TraesCS4B01G237800.1	Wheat	cytosol	18.4	74.68
TraesCS7A01G387700.1	Wheat	cytosol	18.4	74.68
TraesCS3B01G122100.1	Wheat	mitochondrion	11.2	64.81
OQU91808	Sorghum	cytosol	6.56	60.29
Solyc07g042310.1.1	Tomato	cytosol, mitochondrion, nucleus	5.92	59.68
TraesCS3D01G410700.1	Wheat	mitochondrion	28.16	54.83
PGSC0003DMT400074912	Potato	cytosol	13.92	51.79
ATMG00510.1	Thale cress	mitochondrion	31.36	49.75
VIT_00s0332g00160.t01	Wine grape	cytosol, mitochondrion, nucleus	23.68	49.5
Zm00001d046260_P002	Maize	mitochondrion	30.08	47.72
GRMZM5G856027_P02	Maize	cytosol, mitochondrion, peroxisome, plastid	30.08	47.72
BAV58152	Barley	mitochondrion	30.08	47.72
HORVU0Hr1G037100.1	Barley	mitochondrion	29.92	46.29
HORVU0Hr1G033630.1	Barley	mitochondrion	29.92	46.29
TraesCS6D01G139500.1	Wheat	golgi, plastid, unclear	29.76	46.04
HORVU2Hr1G015540.1	Barley	mitochondrion	29.28	45.3
KRH15676	Soybean	mitochondrion	14.08	44.67
CDX90199	Canola	cytosol, mitochondrion, plastid	4.16	29.21
CDY21195	Canola	cytosol	7.36	19.17
CDY19660	Canola	cytosol	7.36	19.17
CDX95226	Canola	cytosol	7.36	19.17
CDY03033	Canola	plastid	11.84	18.83
CDY21194	Canola	cytosol	3.68	17.04
CDY19659	Canola	cytosol	3.68	17.04
CDX95225	Canola	cytosol	3.68	17.04

Protein Annotations

Gene3D:1.10.645.20	MapMan:35.1	GO:A0A078JDN5	UniProt:A0A078JDN5	EnsemblPlants:CDY65733	ProteinID:CDY65733
ProteinID:CDY65733.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0008150	GO:GO:0008152
GO:GO:0016651	GO:GO:0048038	GO:GO:0051287	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00048124001	InterPro:IPR038290
InterPro:NADH_Q_OxRdtase_suD	InterPro:NADH_Q_OxRdtase_suD_sf	InterPro:NiFe-Hase_large	PFAM:PF00346	PANTHER:PTHR11993	PANTHER:PTHR11993:SF10
SUPFAM:SSF56762	UniParc:UPI0004EF126D	SEG:seg	:	:	:

Description

BnaCnng48520DBnaCnng48520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDN5]

Coordinates

chrLK034926:+:16084..19234

Molecular Weight (calculated)

70209.4 Da

IEP (calculated)

9.967

GRAVY (calculated)

-0.412

Length

625 amino acids

Sequence
(BLAST)

001: MQDASGMIGR TEARAKEPLP TASFPVYRRY KASAPEKNGN WVDLLRSIRS ITAHSHNLCR EIGAFGGTGE LHLLLDRCVG QRALGRREGG PHTEKIREWV
101: EIDDSAEERL AGREIFSYGL HLPPGLEIES SPPPLFLIHS FLQAQSVASL LLHNLKSYKQ STKSALRPVT KKEIGLRNKL LNCEVPLRAQ YIRVLFREIT
201: RISNHSLALT THAMDPEKLL EFYERVSGAR MHASFIRPGG VAQDLPLGLC RDIDSFTQQF ASRIDELEEM STGNRIWKQR LVDIGTVTAQ QAKDWGFSGV
301: MLRGRGGSHP PLNGVGPTDR ERISPLASGH VGTARVHRCC EHLEMRVEEA SKSEGRAVGH VTCTELVADW AFSLIKADQL AFFLGAVKPK NDQSCGGTEG
401: TDSANVPRPG KKFPAVAAGA RLRAREPTQQ RRKGCPGRHL RMIRAWWAYP SQPGVCWDSR RAAHYDVHDQ SDPDVPVGTR GDRYDRYCIR IEEMRQIHRI
501: IVQCLNQMPS GMIKADDQKH WEPQFLSSES FLFPSPHPGI AIRFRFFGRI NLLLPSSLIW GKRNRLPVGK LDIKVVPYRA AGERAVAFVV VLQYSNVLRP
601: RSERACRRTT AVPFLSELEH SHLIH

Best Arabidopsis Sequence Match ( ATMG00510.1 )
(BLAST)

001: MTTRKRQIKN FTSNFGPQHP AAHGVSRLVL EMNGEVVERA EPHIGSLHRG TEKLIEYKTY LQALPYSDRS DYVSMMAQEH AHSSAVEKLL NCEVPLRAQY
101: IRVLFREITR ISNHSLALTT HAMDVGALTP FLWAFEEREK LLEFYERVSG ARMHASFIRP GGVAQDLPLG LCRDIDSFTQ QFASRIDELE EMSTGNRIWK
201: QRLVDIGTVT AQQAKDWGFS GVMLRGPGVC WDSRRAAPYD VHDQSDLDVP VGTRGDRYDR YCIRIEEMRQ SLRIIVQCLN QMPSGMIKAD DRKLCPPSRC
301: RMKLSMESSI HHFELYTEGF SVPASSTYTA VEAPKGEFGV FLVSNGSNRP YRRKIRAPGS AHSQGLDSMS KHHMPADVVT IIGTQDIVFG EVDR

Arabidopsis Description

NAD7Nad7 [Source:UniProtKB/TrEMBL;Acc:G1C2X4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.