CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g065770.1.1	Tomato	mitochondrion	69.12	37.3
TraesCS1B01G262900.1	Wheat	cytosol	77.94	34.42
TraesCS1D01G258400.1	Wheat	cytosol	77.94	34.42
TraesCS7D01G075700.1	Wheat	cytosol	76.47	33.77
TraesCS4A01G069400.1	Wheat	cytosol	76.47	33.77
TraesCS4B01G146100.1	Wheat	cytosol	76.47	33.77
TraesCS7A01G387700.1	Wheat	cytosol	76.47	33.77
TraesCSU01G157900.1	Wheat	cytosol	75.0	33.12
TraesCS1B01G385800.1	Wheat	cytosol	75.0	33.12
TraesCS3B01G013700.1	Wheat	cytosol	75.0	33.12
HORVU6Hr1G040930.1	Barley	cytosol, mitochondrion, nucleus	73.53	32.47
HORVU5Hr1G042630.1	Barley	cytosol	79.41	25.71
KRH15676	Soybean	mitochondrion	69.12	23.86
HORVU4Hr1G059530.1	Barley	mitochondrion	77.94	22.18
VIT_00s0332g00160.t01	Wine grape	cytosol, mitochondrion, nucleus	75.0	17.06
ATMG00510.1	Thale cress	mitochondrion	80.88	13.96
CDY65733	Canola	cytosol	60.29	6.56
PGSC0003DMT400074912	Potato	cytosol	2.94	1.19

Protein Annotations

Gene3D:1.10.645.20	MapMan:35.1	UniProt:A0A1Z5S7A9	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739
GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0016651	GO:GO:0048038	GO:GO:0051287
GO:GO:0055114	InterPro:IPR038290	InterPro:NADH_Q_OxRdtase_suD	InterPro:NADH_Q_OxRdtase_suD_sf	InterPro:NiFe-Hase_large	EnsemblPlants:OQU91808
ProteinID:OQU91808	ProteinID:OQU91808.1	PFAM:PF00346	PANTHER:PTHR11993	PANTHER:PTHR11993:SF10	EnsemblPlantsGene:SORBI_3001G251750
SUPFAM:SSF56762	UniParc:UPI000B8BA34F	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:27184944..27185223

Molecular Weight (calculated)

7567.2 Da

IEP (calculated)

4.588

GRAVY (calculated)

0.193

Length

68 amino acids

Sequence
(BLAST)

1: MDVGASTPFL WAFEEREKLL EFYERVPGAR MYASFIRPGG VAQDLPLGLC RDIDLGVGIG WLARFASC

Best Arabidopsis Sequence Match ( ATMG00510.1 )
(BLAST)

001: MTTRKRQIKN FTSNFGPQHP AAHGVSRLVL EMNGEVVERA EPHIGSLHRG TEKLIEYKTY LQALPYSDRS DYVSMMAQEH AHSSAVEKLL NCEVPLRAQY
101: IRVLFREITR ISNHSLALTT HAMDVGALTP FLWAFEEREK LLEFYERVSG ARMHASFIRP GGVAQDLPLG LCRDIDSFTQ QFASRIDELE EMSTGNRIWK
201: QRLVDIGTVT AQQAKDWGFS GVMLRGPGVC WDSRRAAPYD VHDQSDLDVP VGTRGDRYDR YCIRIEEMRQ SLRIIVQCLN QMPSGMIKAD DRKLCPPSRC
301: RMKLSMESSI HHFELYTEGF SVPASSTYTA VEAPKGEFGV FLVSNGSNRP YRRKIRAPGS AHSQGLDSMS KHHMPADVVT IIGTQDIVFG EVDR

Arabidopsis Description

NAD7Nad7 [Source:UniProtKB/TrEMBL;Acc:G1C2X4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.