Factsheet for HORVU6Hr1G040930.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

cytosol 1
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G387700.1	Wheat	cytosol	92.86	92.86
HORVU5Hr1G093790.1	Barley	cytosol	18.83	85.29
HORVU7Hr1G115900.1	Barley	cytosol	33.12	78.46
Solyc01g065770.1.1	Tomato	mitochondrion	61.69	75.4
OQU91808	Sorghum	cytosol	32.47	73.53
HORVU5Hr1G042630.1	Barley	cytosol	98.05	71.9
HORVU4Hr1G059530.1	Barley	mitochondrion	93.51	60.25
VIT_00s0332g00160.t01	Wine grape	cytosol, mitochondrion, nucleus	88.96	45.82
BAV58152	Barley	mitochondrion	92.86	36.29
HORVU0Hr1G033630.1	Barley	mitochondrion	92.86	35.4
HORVU0Hr1G037100.1	Barley	mitochondrion	92.86	35.4
HORVU2Hr1G015540.1	Barley	mitochondrion	89.61	34.16
HORVU3Hr1G075000.1	Barley	cytosol, mitochondrion	29.87	23.23
PGSC0003DMT400074912	Potato	cytosol	19.48	17.86
HORVU1Hr1G048080.1	Barley	cytosol	35.71	17.3
HORVU5Hr1G005410.1	Barley	cytosol, plastid	33.77	14.9
AGP50801	Barley	cytosol	35.71	14.86
HORVU6Hr1G037410.1	Barley	extracellular	27.27	14.53
HORVU0Hr1G036480.1	Barley	cytosol, mitochondrion, plastid	35.71	13.99
HORVU0Hr1G024830.2	Barley	cytosol	35.71	13.99
HORVU1Hr1G065340.1	Barley	cytosol	22.08	13.77
HORVU4Hr1G027710.1	Barley	mitochondrion	16.23	11.9
HORVU3Hr1G004810.3	Barley	cytosol	3.25	2.65
HORVU0Hr1G033540.1	Barley	cytosol	1.3	1.17
HORVU3Hr1G055090.1	Barley	cytosol	0.65	0.58
HORVU6Hr1G039050.1	Barley	mitochondrion	0.0	0.0
HORVU2Hr1G049060.1	Barley	cytosol	0.0	0.0

Protein Annotations

Gene3D:1.10.645.20	MapMan:35.1	UniProt:A0A287U1M0	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005488	GO:GO:0008150	GO:GO:0008152	GO:GO:0016651	GO:GO:0048038	GO:GO:0051287
GO:GO:0055114	EnsemblPlantsGene:HORVU6Hr1G040930	EnsemblPlants:HORVU6Hr1G040930.1	InterPro:IPR038290	InterPro:NADH_Q_OxRdtase_suD	InterPro:NADH_Q_OxRdtase_suD_sf
InterPro:NiFe-Hase_large	PFAM:PF00346	PANTHER:PTHR11993	PANTHER:PTHR11993:SF10	SUPFAM:SSF56762	UniParc:UPI000B485AA5

Description

No Description!

Coordinates

chrchr6H:-:222294464..222294981

Molecular Weight (calculated)

17481.8 Da

IEP (calculated)

7.043

GRAVY (calculated)

-0.263

Length

154 amino acids

Sequence
(BLAST)

001: MAQEHAHSSA VERLLNCEVP LRAQYIRVLF CELTRISNHS LASTTRAMDV GASTPFLWAF EEREKLLEFY ERFSGARMHA SFIRPGGVAQ DLPLGLCRDI
101: YSSTQQFASR IDELEEMSTG HRIWKQRLVD IGTVTTQQAN DWGFSGVMLR GRAT

Best Arabidopsis Sequence Match ( ATMG00510.1 )
(BLAST)

001: MTTRKRQIKN FTSNFGPQHP AAHGVSRLVL EMNGEVVERA EPHIGSLHRG TEKLIEYKTY LQALPYSDRS DYVSMMAQEH AHSSAVEKLL NCEVPLRAQY
101: IRVLFREITR ISNHSLALTT HAMDVGALTP FLWAFEEREK LLEFYERVSG ARMHASFIRP GGVAQDLPLG LCRDIDSFTQ QFASRIDELE EMSTGNRIWK
201: QRLVDIGTVT AQQAKDWGFS GVMLRGPGVC WDSRRAAPYD VHDQSDLDVP VGTRGDRYDR YCIRIEEMRQ SLRIIVQCLN QMPSGMIKAD DRKLCPPSRC
301: RMKLSMESSI HHFELYTEGF SVPASSTYTA VEAPKGEFGV FLVSNGSNRP YRRKIRAPGS AHSQGLDSMS KHHMPADVVT IIGTQDIVFG EVDR

Arabidopsis Description

NAD7Nad7 [Source:UniProtKB/TrEMBL;Acc:G1C2X4]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.