Factsheet for HORVU0Hr1G036480.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

mitochondrion 2
cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AGP50801	Barley	cytosol	94.15	100.0
HORVU1Hr1G048080.1	Barley	cytosol	80.66	99.69
HORVU6Hr1G037410.1	Barley	extracellular	73.28	99.65
HORVU0Hr1G033540.1	Barley	cytosol	43.26	99.42
HORVU0Hr1G024830.2	Barley	cytosol	98.22	98.22
TraesCS2D01G243700.1	Wheat	plastid	97.96	97.96
CAA33911	Rice	mitochondrion, plastid	97.46	97.46
TraesCSU01G237200.1	Wheat	cytosol, mitochondrion, plastid	96.18	96.43
TraesCS7B01G080500.1	Wheat	cytosol, mitochondrion, plastid	95.93	95.93
TraesCS1D01G184000.1	Wheat	cytosol, mitochondrion, plastid	94.66	94.9
GRMZM5G853723_P01	Maize	plastid	94.4	94.4
HORVU3Hr1G075000.1	Barley	cytosol, mitochondrion	46.56	92.42
HORVU5Hr1G005410.1	Barley	cytosol, plastid	79.39	89.4
Solyc02g011810.1.1	Tomato	cytosol	12.72	89.29
HORVU4Hr1G027710.1	Barley	mitochondrion	46.31	86.67
Solyc01g011410.1.1	Tomato	nucleus	16.03	86.3
HORVU2Hr1G049060.1	Barley	cytosol	22.65	81.65
VIT_06s0004g07410.t01	Wine grape	cytosol	18.32	79.12
PGSC0003DMT400022652	Potato	mitochondrion	44.27	75.65
HORVU1Hr1G065340.1	Barley	cytosol	39.69	63.16
VIT_10s0116g00060.t01	Wine grape	plasma membrane	53.69	47.85
HORVU6Hr1G040930.1	Barley	cytosol, mitochondrion, nucleus	13.99	35.71
HORVU5Hr1G093790.1	Barley	cytosol	3.05	35.29
HORVU4Hr1G059530.1	Barley	mitochondrion	21.37	35.15
HORVU5Hr1G042630.1	Barley	cytosol	17.05	31.9
BAV58152	Barley	mitochondrion	31.55	31.47
HORVU0Hr1G037100.1	Barley	mitochondrion	31.3	30.45
HORVU0Hr1G033630.1	Barley	mitochondrion	31.3	30.45
HORVU2Hr1G015540.1	Barley	mitochondrion	31.04	30.2
HORVU3Hr1G055090.1	Barley	cytosol	9.92	22.67
HORVU7Hr1G115900.1	Barley	cytosol	3.56	21.54
HORVU3Hr1G004810.3	Barley	cytosol	9.92	20.63
HORVU6Hr1G039050.1	Barley	mitochondrion	4.83	15.08
Solyc07g032420.1.1	Tomato	cytosol	1.78	3.76

Protein Annotations

MapMan:1.1.8.1.2.1	Gene3D:1.10.645.20	EntrezGene:4525173	UniProt:A0A0X9V2N7	ProteinID:AMA20302.1	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006091	GO:GO:0008150	GO:GO:0008152	GO:GO:0009507	GO:GO:0009535
GO:GO:0009536	GO:GO:0009579	GO:GO:0009987	GO:GO:0015979	GO:GO:0016020	GO:GO:0016491
GO:GO:0016651	GO:GO:0016655	GO:GO:0019684	GO:GO:0048038	GO:GO:0051287	GO:GO:0055114
EnsemblPlantsGene:HORVU0Hr1G036480	EnsemblPlants:HORVU0Hr1G036480.1	InterPro:IPR038290	HAMAP:MF_01358	InterPro:NADH_Q_OxRdtase_suD	InterPro:NADH_Q_OxRdtase_suD_sf
InterPro:NADH_UbQ_OxRdtase_49kDa_CS	InterPro:NDH1_su_D/H	InterPro:NiFe-Hase_large	PFAM:PF00346	ScanProsite:PS00535	PANTHER:PTHR11993
SUPFAM:SSF56762	UniParc:UPI00001308B5	RefSeq:YP_874708.1	:	:	:

Description

NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [Source:UniProtKB/TrEMBL;Acc:A0A0X9V2N7]

Coordinates

chrchrUn:+:226314936..226316233

Molecular Weight (calculated)

45646.7 Da

IEP (calculated)

5.209

GRAVY (calculated)

-0.143

Length

393 amino acids

Sequence
(BLAST)

001: MSLPLTKKDL MIVNMGPQHP SMHGVLRLIV TLDGEDVIDC EPILGYLHRG MEKIAENRTI IQYLPYVTRW DYLATMFTEA ITVNAPEFLE NIQIPQRASY
101: IRVIMLELSR IASHLLWLGP FMADLGAQTP FFYIFREREL IYDLFEAATG MRMMHNYFRI GGVAADLPYG WIDKCLDFCD YFLRGVVEYQ QLITQNPIFL
201: ERVEGVGFIS GEEAVNWGLS GPMLRASGIQ WDLRKVDPYE SYNQFDWKVQ WQKEGDSLAR YLVRVGEMSE SIKIIQQAIE KIPGGPYENL EVRRFKKEKN
301: SEWNDFEYKF LGKKPSPNFE LSRQELYVRV EAPKGELGIY LVGDDSLFPW RWKIRPPGFI NLQILPQLVK KMKLADIMTI LGSIDIIMGE VDR

Best Arabidopsis Sequence Match ( ATCG01110.1 )
(BLAST)

001: MKRPVTGKDL MIVNMGPHHP SMHGVLRLIV TLDGEDVVDC EPILGYLHRG MEKIAENRAI IQYLPYVTRW DYLATMFTEA ITVNGPEQLG NIQVPKRASY
101: IRVIMLELSR IASHLLWLGP FMADIGAQTP FFYIFREREF VYDLFEAATG MRMMHNFFRI GGIAADLPYG WIDKCLDFCD YFLTEVVEYQ KLITRNPIFL
201: ERVEGVGIIG GEEAINWGLS GPMLRASGIP WDLRKIDRYE SYDEFEWEIQ WQKQGDSLAR YLVRLSEMTE SIKIIQQALE GLPGGPYENL ESRGFDRKRN
301: PEWNDFEYRF ISKKPSPTFE LSKQELYVRV EAPKGELGIF LIGDQSGFPW RWKIRPPGFI NLQILPELVK RMKLADIMTI LGSIDIIMGE VDR

Arabidopsis Description

NDHHNAD(P)H-quinone oxidoreductase subunit H, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56753]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.