Factsheet for Solyc02g011810.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
EpiLoc:	plastid
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g022160.1.1	Tomato	cytosol	35.71	27.4
Solyc01g011410.1.1	Tomato	nucleus	35.71	27.4
Solyc10g047470.1.1	Tomato	mitochondrion	42.86	26.09
Solyc07g042310.1.1	Tomato	cytosol, mitochondrion, nucleus	19.64	17.74
Solyc08g022170.1.1	Tomato	plastid	39.29	16.3
TraesCS1B01G405900.1	Wheat	cytosol	89.29	14.58
AGP50801	Barley	cytosol	87.5	13.24
TraesCSU01G237200.1	Wheat	cytosol, mitochondrion, plastid	89.29	12.76
CAA33911	Rice	mitochondrion, plastid	89.29	12.72
HORVU0Hr1G036480.1	Barley	cytosol, mitochondrion, plastid	89.29	12.72
TraesCS2D01G243700.1	Wheat	plastid	89.29	12.72
HORVU0Hr1G024830.2	Barley	cytosol	89.29	12.72
TraesCS1D01G184000.1	Wheat	cytosol, mitochondrion, plastid	87.5	12.5
TraesCS7B01G080500.1	Wheat	cytosol, mitochondrion, plastid	87.5	12.47
GRMZM5G853723_P01	Maize	plastid	83.93	11.96
Solyc01g065770.1.1	Tomato	mitochondrion	21.43	9.52
HORVU4Hr1G027710.1	Barley	mitochondrion	35.71	9.52
HORVU6Hr1G037410.1	Barley	extracellular	44.64	8.65
HORVU1Hr1G048080.1	Barley	cytosol	48.21	8.49
TraesCS5D01G376800.1	Wheat	cytosol, mitochondrion, plastid	35.71	8.23
HORVU5Hr1G005410.1	Barley	cytosol, plastid	48.21	7.74
Solyc10g052800.1.1	Tomato	cytosol	14.29	7.69
Solyc09g009360.1.1	Tomato	cytosol, endoplasmic reticulum, nucleus, plastid	19.64	6.11
Solyc01g017740.1.1	Tomato	nucleus	8.93	5.15
Solyc12g035590.1.1	Tomato	cytosol	0.0	0.0
Solyc10g047460.1.1	Tomato	cytosol	0.0	0.0
Solyc07g032420.1.1	Tomato	cytosol	0.0	0.0

Protein Annotations

EnsemblPlants:Solyc02g011810.1.1	EnsemblPlantsGene:Solyc02g011810.1	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008150	GO:GO:0008152	GO:GO:0016651	GO:GO:0048038	GO:GO:0051287	GO:GO:0055114
InterPro:NADH_Q_OxRdtase_suD	InterPro:NiFe-Hase_large	PANTHER:PTHR11993	PFAM:PF00346	SUPFAM:SSF56762	TMHMM:TMhelix
UniParc:UPI0002768070	UniProt:K4B4I0	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr2:-:13784724..13784894

Molecular Weight (calculated)

6656.1 Da

IEP (calculated)

7.510

GRAVY (calculated)

-0.050

Length

56 amino acids

Sequence
(BLAST)

1: MEKIAENRTI IQYFPYATRW DYLATMLTEA ATGMRMMHNY FRIGGVVAYL PYGWIE

Best Arabidopsis Sequence Match ( ATCG01110.1 )
(BLAST)

001: MKRPVTGKDL MIVNMGPHHP SMHGVLRLIV TLDGEDVVDC EPILGYLHRG MEKIAENRAI IQYLPYVTRW DYLATMFTEA ITVNGPEQLG NIQVPKRASY
101: IRVIMLELSR IASHLLWLGP FMADIGAQTP FFYIFREREF VYDLFEAATG MRMMHNFFRI GGIAADLPYG WIDKCLDFCD YFLTEVVEYQ KLITRNPIFL
201: ERVEGVGIIG GEEAINWGLS GPMLRASGIP WDLRKIDRYE SYDEFEWEIQ WQKQGDSLAR YLVRLSEMTE SIKIIQQALE GLPGGPYENL ESRGFDRKRN
301: PEWNDFEYRF ISKKPSPTFE LSKQELYVRV EAPKGELGIF LIGDQSGFPW RWKIRPPGFI NLQILPELVK RMKLADIMTI LGSIDIIMGE VDR

Arabidopsis Description

NDHHNAD(P)H-quinone oxidoreductase subunit H, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P56753]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.